Gyrovirus GyV7-SF

Taxonomy: Viruses; Anelloviridae; Gyrovirus; Gyrovirus galga2

Average proteome isoelectric point is 7.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A089RS37|A0A089RS37_9VIRU Dual specificity protein phosphatase VP2 OS=Gyrovirus GyV7-SF OX=1548711 PE=3 SV=1
MM1 pKa = 7.6LSGGVEE7 pKa = 4.14DD8 pKa = 4.5TQPGCSIPAGGSEE21 pKa = 4.35LPFRR25 pKa = 11.84QEE27 pKa = 3.84GQRR30 pKa = 11.84GPSGAGGPGKK40 pKa = 8.25TLNSHH45 pKa = 5.95GTPIHH50 pKa = 6.6EE51 pKa = 5.01NGSTPQTPVTPSPRR65 pKa = 11.84AHH67 pKa = 6.21IRR69 pKa = 11.84KK70 pKa = 7.87TYY72 pKa = 10.3GDD74 pKa = 3.33VRR76 pKa = 11.84ASNKK80 pKa = 9.32FVSVGWDD87 pKa = 3.11SLEE90 pKa = 5.15RR91 pKa = 11.84DD92 pKa = 3.95PNWYY96 pKa = 9.31RR97 pKa = 11.84VNYY100 pKa = 9.84NYY102 pKa = 10.44TIATWLRR109 pKa = 11.84NCSRR113 pKa = 11.84THH115 pKa = 7.85DD116 pKa = 4.5EE117 pKa = 3.88ICTCGSFRR125 pKa = 11.84SHH127 pKa = 6.58WFQEE131 pKa = 4.55CSGLTDD137 pKa = 3.43ACSQTEE143 pKa = 3.9KK144 pKa = 11.21DD145 pKa = 3.43LGRR148 pKa = 11.84LLSEE152 pKa = 4.75GKK154 pKa = 9.64RR155 pKa = 11.84AKK157 pKa = 10.29QKK159 pKa = 7.47TTLPCNPTPHH169 pKa = 6.8IRR171 pKa = 11.84RR172 pKa = 11.84KK173 pKa = 6.15TVRR176 pKa = 11.84WQDD179 pKa = 3.58EE180 pKa = 4.17QDD182 pKa = 4.1DD183 pKa = 4.28LADD186 pKa = 4.94DD187 pKa = 4.27STLSTEE193 pKa = 4.72DD194 pKa = 3.34DD195 pKa = 3.45GGYY198 pKa = 8.77TGDD201 pKa = 4.16EE202 pKa = 4.49DD203 pKa = 4.83DD204 pKa = 4.82FADD207 pKa = 3.87IEE209 pKa = 4.46PVNFDD214 pKa = 5.47LDD216 pKa = 3.78PQDD219 pKa = 4.42AFIAALRR226 pKa = 11.84GDD228 pKa = 4.1SSTQGPAPTWW238 pKa = 3.31

Molecular weight: 26.12 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A089QEX9|A0A089QEX9_9VIRU CA1 OS=Gyrovirus GyV7-SF OX=1548711 PE=3 SV=1
MM1 pKa = 7.26AHH3 pKa = 7.48LYY5 pKa = 8.78TRR7 pKa = 11.84TVLRR11 pKa = 11.84HH12 pKa = 5.82KK13 pKa = 10.34LLSRR17 pKa = 11.84QAPEE21 pKa = 4.09HH22 pKa = 5.51TSGRR26 pKa = 11.84PMEE29 pKa = 4.37TSEE32 pKa = 4.47QVTNSSALGGTVSKK46 pKa = 10.5EE47 pKa = 3.4ILIGIGSITITLSLPGSATVRR68 pKa = 11.84VLTTRR73 pKa = 11.84SAPVDD78 pKa = 3.69LSEE81 pKa = 4.67ATGSKK86 pKa = 10.23NALDD90 pKa = 4.29LRR92 pKa = 11.84MPAAKK97 pKa = 9.7RR98 pKa = 11.84RR99 pKa = 11.84RR100 pKa = 11.84ILVDD104 pKa = 3.26CSVKK108 pKa = 10.62EE109 pKa = 3.95NEE111 pKa = 4.16QNRR114 pKa = 11.84KK115 pKa = 8.91LRR117 pKa = 11.84YY118 pKa = 9.07LATQLLIYY126 pKa = 10.21AARR129 pKa = 11.84LL130 pKa = 3.41

Molecular weight: 14.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

833

130

465

277.7

31.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.083 ± 0.707

1.681 ± 0.479

5.162 ± 1.547

3.962 ± 0.862

3.601 ± 1.168

6.963 ± 1.177

2.281 ± 0.102

3.481 ± 0.53

4.082 ± 0.274

7.443 ± 1.695

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.681 ± 0.476

4.202 ± 0.422

7.683 ± 1.123

3.842 ± 0.309

9.124 ± 0.915

8.403 ± 0.459

7.683 ± 1.089

5.042 ± 0.635

2.761 ± 0.837

3.842 ± 0.974
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski