Odonata-associated circular virus-13

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.19

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B4UGT7|A0A0B4UGT7_9VIRU Putative capsid protein OS=Odonata-associated circular virus-13 OX=1592113 PE=4 SV=1
MM1 pKa = 7.48GSNVLRR7 pKa = 11.84AKK9 pKa = 10.37NGSSGPRR16 pKa = 11.84RR17 pKa = 11.84KK18 pKa = 10.16YY19 pKa = 10.64KK20 pKa = 10.48LYY22 pKa = 10.34CFTSFAVDD30 pKa = 3.25QEE32 pKa = 4.22PSYY35 pKa = 11.61DD36 pKa = 3.73PTAMQYY42 pKa = 10.92LIYY45 pKa = 10.62GRR47 pKa = 11.84EE48 pKa = 3.89TCPDD52 pKa = 3.1SGRR55 pKa = 11.84THH57 pKa = 6.61LQGFVAFKK65 pKa = 9.95NRR67 pKa = 11.84QYY69 pKa = 10.15FTACKK74 pKa = 9.76KK75 pKa = 10.65YY76 pKa = 10.13FGTAHH81 pKa = 6.45VEE83 pKa = 3.95ACKK86 pKa = 9.95GTFAEE91 pKa = 4.12NQEE94 pKa = 4.2YY95 pKa = 10.2CKK97 pKa = 10.6KK98 pKa = 10.86DD99 pKa = 3.0GDD101 pKa = 3.97YY102 pKa = 11.34KK103 pKa = 11.18EE104 pKa = 5.56FGTAPEE110 pKa = 4.32IKK112 pKa = 10.34SGGDD116 pKa = 3.09VFNDD120 pKa = 3.29VLRR123 pKa = 11.84KK124 pKa = 10.15AEE126 pKa = 4.3AGSIQEE132 pKa = 4.76IKK134 pKa = 10.65DD135 pKa = 4.13LYY137 pKa = 8.17PGLYY141 pKa = 9.27IRR143 pKa = 11.84YY144 pKa = 8.93KK145 pKa = 9.67KK146 pKa = 8.93TLEE149 pKa = 4.07SIKK152 pKa = 10.52RR153 pKa = 11.84FNAEE157 pKa = 3.91QLEE160 pKa = 4.45EE161 pKa = 4.28SCGIWLTGPPRR172 pKa = 11.84SGKK175 pKa = 10.15DD176 pKa = 3.33YY177 pKa = 11.02AVSTFFSSIYY187 pKa = 10.94SKK189 pKa = 10.34MLNKK193 pKa = 9.62WFDD196 pKa = 3.44GYY198 pKa = 11.04EE199 pKa = 4.13GEE201 pKa = 4.5EE202 pKa = 4.3CVHH205 pKa = 6.9LSDD208 pKa = 3.54MDD210 pKa = 3.98KK211 pKa = 10.36NHH213 pKa = 6.3VYY215 pKa = 9.72MGSFLKK221 pKa = 10.15IWCDD225 pKa = 3.14RR226 pKa = 11.84YY227 pKa = 10.41PFRR230 pKa = 11.84AEE232 pKa = 3.65IKK234 pKa = 9.86GGTMVIRR241 pKa = 11.84PKK243 pKa = 10.88YY244 pKa = 9.87IVVTSNYY251 pKa = 9.48KK252 pKa = 10.67LEE254 pKa = 5.3DD255 pKa = 3.44IFDD258 pKa = 3.97GSMLSALQARR268 pKa = 11.84FMVMCYY274 pKa = 10.59DD275 pKa = 3.58PVDD278 pKa = 3.97GVVVTPRR285 pKa = 11.84PVFQPSDD292 pKa = 3.33RR293 pKa = 11.84FIQALQHH300 pKa = 6.68AIPKK304 pKa = 10.41GEE306 pKa = 5.01DD307 pKa = 3.42VPDD310 pKa = 3.81MAPKK314 pKa = 10.43AGPSNALQEE323 pKa = 4.78AEE325 pKa = 4.52FSSSDD330 pKa = 3.45EE331 pKa = 4.35FKK333 pKa = 10.75EE334 pKa = 4.16SQVPKK339 pKa = 10.2RR340 pKa = 11.84KK341 pKa = 9.83KK342 pKa = 10.31KK343 pKa = 10.39LL344 pKa = 3.32

Molecular weight: 39.08 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B4UGT7|A0A0B4UGT7_9VIRU Putative capsid protein OS=Odonata-associated circular virus-13 OX=1592113 PE=4 SV=1
MM1 pKa = 8.19RR2 pKa = 11.84YY3 pKa = 9.5RR4 pKa = 11.84RR5 pKa = 11.84GKK7 pKa = 8.38TYY9 pKa = 9.4RR10 pKa = 11.84TWRR13 pKa = 11.84RR14 pKa = 11.84KK15 pKa = 9.32RR16 pKa = 11.84GRR18 pKa = 11.84LTRR21 pKa = 11.84YY22 pKa = 8.74KK23 pKa = 10.38KK24 pKa = 10.31RR25 pKa = 11.84NFRR28 pKa = 11.84LRR30 pKa = 11.84MNSRR34 pKa = 11.84RR35 pKa = 11.84ARR37 pKa = 11.84FQNEE41 pKa = 3.2RR42 pKa = 11.84RR43 pKa = 11.84SFKK46 pKa = 10.22STATYY51 pKa = 10.67QLFYY55 pKa = 10.66TVDD58 pKa = 4.23LPTSDD63 pKa = 3.7TPTVSNARR71 pKa = 11.84YY72 pKa = 8.55FQDD75 pKa = 3.39SVKK78 pKa = 9.72MFPLGSQLFNRR89 pKa = 11.84YY90 pKa = 8.78LRR92 pKa = 11.84TYY94 pKa = 10.87AWVKK98 pKa = 10.27LNSVTYY104 pKa = 7.45YY105 pKa = 9.8WRR107 pKa = 11.84IGFVGYY113 pKa = 10.82NEE115 pKa = 4.36AEE117 pKa = 4.37KK118 pKa = 11.12VPDD121 pKa = 4.54PNDD124 pKa = 3.69PQKK127 pKa = 11.05KK128 pKa = 7.97KK129 pKa = 10.57QLVVMEE135 pKa = 4.8AVNSLMGKK143 pKa = 9.95FPFYY147 pKa = 11.03LNWSLDD153 pKa = 3.13GDD155 pKa = 4.43NPTKK159 pKa = 10.33MAMDD163 pKa = 5.15DD164 pKa = 3.8LAACPSSRR172 pKa = 11.84KK173 pKa = 10.07VYY175 pKa = 10.68INGKK179 pKa = 9.12KK180 pKa = 8.46ATKK183 pKa = 8.56FTYY186 pKa = 10.18SIPKK190 pKa = 9.07AYY192 pKa = 10.33RR193 pKa = 11.84MYY195 pKa = 10.76LSSSVFRR202 pKa = 11.84SMSVSSGIKK211 pKa = 10.46NNITTLFNNSSLRR224 pKa = 11.84CPDD227 pKa = 3.25KK228 pKa = 11.34FNGSMLDD235 pKa = 3.04IFEE238 pKa = 4.85KK239 pKa = 10.51YY240 pKa = 10.63AGVSLDD246 pKa = 3.58NDD248 pKa = 3.92MACEE252 pKa = 4.63FILWCDD258 pKa = 3.25VYY260 pKa = 10.57MDD262 pKa = 4.56CSFKK266 pKa = 11.1GRR268 pKa = 11.84IDD270 pKa = 3.47NAA272 pKa = 3.81

Molecular weight: 32.0 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

616

272

344

308.0

35.54

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.844 ± 0.443

2.273 ± 0.276

6.006 ± 0.079

4.708 ± 1.589

6.169 ± 0.052

6.169 ± 1.116

0.812 ± 0.516

3.734 ± 0.504

8.604 ± 0.328

6.169 ± 0.519

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.571 ± 0.534

4.708 ± 1.447

4.87 ± 0.525

3.084 ± 0.558

6.981 ± 1.638

8.279 ± 0.579

4.87 ± 0.643

5.682 ± 0.106

1.299 ± 0.343

6.169 ± 0.285
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski