Myroides guanonis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Myroides

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2674 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1I3SHE0|A0A1I3SHE0_9FLAO Uncharacterized protein OS=Myroides guanonis OX=1150112 GN=SAMN04487893_11047 PE=4 SV=1
MM1 pKa = 7.92ADD3 pKa = 3.08IKK5 pKa = 10.4ITIIDD10 pKa = 3.73RR11 pKa = 11.84EE12 pKa = 4.53GEE14 pKa = 4.07KK15 pKa = 10.5HH16 pKa = 6.72IVDD19 pKa = 4.72APTDD23 pKa = 3.5MNMNIMEE30 pKa = 4.73LVRR33 pKa = 11.84AYY35 pKa = 9.97EE36 pKa = 4.0LAPEE40 pKa = 4.26GTIGICGGMAMCASCQCYY58 pKa = 9.92VLNAEE63 pKa = 4.47VVDD66 pKa = 4.63LPEE69 pKa = 4.25MNPDD73 pKa = 3.25EE74 pKa = 5.24EE75 pKa = 5.16AMLWEE80 pKa = 4.31ARR82 pKa = 11.84NVQDD86 pKa = 5.01NSRR89 pKa = 11.84LGCQIHH95 pKa = 7.12ISEE98 pKa = 4.67EE99 pKa = 4.1LDD101 pKa = 3.41GLEE104 pKa = 4.54VEE106 pKa = 5.0LAPAEE111 pKa = 4.12

Molecular weight: 12.25 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1I3M492|A0A1I3M492_9FLAO 30S ribosomal protein S19 OS=Myroides guanonis OX=1150112 GN=rpsS PE=3 SV=1
MM1 pKa = 7.56SLTKK5 pKa = 9.82SEE7 pKa = 3.62RR8 pKa = 11.84RR9 pKa = 11.84QRR11 pKa = 11.84IKK13 pKa = 10.59FRR15 pKa = 11.84VRR17 pKa = 11.84KK18 pKa = 9.14IVSGTAARR26 pKa = 11.84PRR28 pKa = 11.84LSVFRR33 pKa = 11.84SNKK36 pKa = 9.35EE37 pKa = 3.2IYY39 pKa = 9.93AQIIDD44 pKa = 4.32DD45 pKa = 4.18VNGVTLTAASSRR57 pKa = 11.84EE58 pKa = 3.9AGITRR63 pKa = 11.84GTNIEE68 pKa = 3.97TAASVGKK75 pKa = 10.38LIAEE79 pKa = 4.54KK80 pKa = 10.41ALKK83 pKa = 10.48AGIEE87 pKa = 4.27TVSFDD92 pKa = 3.64RR93 pKa = 11.84NGYY96 pKa = 9.22LYY98 pKa = 10.36HH99 pKa = 6.83GRR101 pKa = 11.84VKK103 pKa = 10.71SLAEE107 pKa = 3.97GARR110 pKa = 11.84EE111 pKa = 3.92AGLKK115 pKa = 9.57FF116 pKa = 3.59

Molecular weight: 12.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2674

0

2674

919248

39

3566

343.8

38.87

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.927 ± 0.048

0.794 ± 0.022

5.432 ± 0.034

6.885 ± 0.044

5.273 ± 0.038

6.331 ± 0.048

1.72 ± 0.019

8.034 ± 0.047

7.612 ± 0.036

9.538 ± 0.056

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.279 ± 0.027

6.002 ± 0.045

3.226 ± 0.023

3.371 ± 0.029

3.423 ± 0.031

6.807 ± 0.043

5.621 ± 0.047

6.488 ± 0.04

1.033 ± 0.017

4.203 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski