endosymbiont GvMRE of Glomus versiforme

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Tenericutes; Mollicutes; Mycoplasmatales; unclassified Mycoplasmatales

Average proteome isoelectric point is 7.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2357 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A397FNK8|A0A397FNK8_9MOLU 30S ribosomal protein S15 OS=endosymbiont GvMRE of Glomus versiforme OX=2039283 GN=GvMRE_IIg473 PE=3 SV=1
MM1 pKa = 7.47KK2 pKa = 10.63GIIEE6 pKa = 4.26VTRR9 pKa = 11.84ITAATFLAAGSVLNVIYY26 pKa = 10.45GPQTYY31 pKa = 9.8EE32 pKa = 3.9SYY34 pKa = 10.9FEE36 pKa = 4.14EE37 pKa = 4.46QVTPEE42 pKa = 4.32IIICFDD48 pKa = 3.07IDD50 pKa = 3.8GVGRR54 pKa = 11.84IPLEE58 pKa = 3.79EE59 pKa = 4.06EE60 pKa = 4.1QFDD63 pKa = 3.96EE64 pKa = 4.77

Molecular weight: 7.17 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A397FVI5|A0A397FVI5_9MOLU Uncharacterized protein OS=endosymbiont GvMRE of Glomus versiforme OX=2039283 GN=GvMRE_I1g370 PE=4 SV=1
MM1 pKa = 7.05STIKK5 pKa = 10.48FKK7 pKa = 10.93SRR9 pKa = 11.84KK10 pKa = 9.1SFSKK14 pKa = 10.6RR15 pKa = 11.84FAKK18 pKa = 8.94KK19 pKa = 7.86TANGKK24 pKa = 9.32LKK26 pKa = 10.36RR27 pKa = 11.84GKK29 pKa = 10.75SNTSHH34 pKa = 7.22LFGNKK39 pKa = 7.13TSRR42 pKa = 11.84QRR44 pKa = 11.84KK45 pKa = 7.52NSRR48 pKa = 11.84KK49 pKa = 9.23VAFLSSSDD57 pKa = 3.49VKK59 pKa = 10.7RR60 pKa = 11.84SRR62 pKa = 11.84KK63 pKa = 8.82MINHH67 pKa = 6.66KK68 pKa = 10.74SII70 pKa = 3.63

Molecular weight: 8.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2357

0

2357

596243

29

2665

253.0

29.5

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.352 ± 0.051

1.305 ± 0.026

4.539 ± 0.042

8.982 ± 0.082

4.557 ± 0.047

4.44 ± 0.054

1.605 ± 0.019

7.886 ± 0.049

11.442 ± 0.077

9.974 ± 0.057

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.35 ± 0.017

6.759 ± 0.044

3.134 ± 0.035

5.161 ± 0.081

4.03 ± 0.038

5.877 ± 0.043

4.923 ± 0.042

4.334 ± 0.035

1.717 ± 0.025

3.634 ± 0.032
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski