Beihai sobemo-like virus 3

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 7.18

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KEB0|A0A1L3KEB0_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 3 OX=1922700 PE=4 SV=1
MM1 pKa = 7.57GATIAEE7 pKa = 4.36TLCIVFATLVLTRR20 pKa = 11.84LSVDD24 pKa = 3.57YY25 pKa = 10.62VTDD28 pKa = 4.29LYY30 pKa = 11.37GRR32 pKa = 11.84VYY34 pKa = 10.83SALAYY39 pKa = 8.48NAKK42 pKa = 9.91RR43 pKa = 11.84VRR45 pKa = 11.84ACMKK49 pKa = 10.58LMYY52 pKa = 10.34CPFRR56 pKa = 11.84RR57 pKa = 11.84VEE59 pKa = 4.03KK60 pKa = 10.5RR61 pKa = 11.84DD62 pKa = 3.53VFPSTEE68 pKa = 4.07GFFMHH73 pKa = 7.43PDD75 pKa = 3.15SSGVLQAYY83 pKa = 9.39YY84 pKa = 10.42RR85 pKa = 11.84FPAEE89 pKa = 3.59YY90 pKa = 10.59GGFLQRR96 pKa = 11.84LEE98 pKa = 4.36RR99 pKa = 11.84NGGYY103 pKa = 10.64GLGGEE108 pKa = 4.65YY109 pKa = 10.75VPLWKK114 pKa = 10.23EE115 pKa = 3.6AVFNKK120 pKa = 9.81VGCGEE125 pKa = 4.12SAIAGAAYY133 pKa = 9.51EE134 pKa = 4.1RR135 pKa = 11.84TVDD138 pKa = 3.39QKK140 pKa = 11.21LWKK143 pKa = 9.22GTFKK147 pKa = 11.31VNGEE151 pKa = 4.11TGVYY155 pKa = 10.68DD156 pKa = 4.55SMGLNIAGCAVITAHH171 pKa = 7.52ALLHH175 pKa = 6.22KK176 pKa = 9.89EE177 pKa = 3.97AVVLTGGNTVNVGVRR192 pKa = 11.84VEE194 pKa = 3.97TSRR197 pKa = 11.84FLKK200 pKa = 10.4PEE202 pKa = 3.45KK203 pKa = 10.11CYY205 pKa = 10.38TGSAFDD211 pKa = 3.88FAVAPLTANEE221 pKa = 3.91WSAIGAKK228 pKa = 10.12ALSSKK233 pKa = 10.71DD234 pKa = 3.58FAPVMPGPIDD244 pKa = 3.22MCFGQGVEE252 pKa = 4.09GSLFVSKK259 pKa = 10.61GQLEE263 pKa = 4.4PQVTRR268 pKa = 11.84AEE270 pKa = 4.03KK271 pKa = 10.64AGIIVASISTEE282 pKa = 3.77PGASGSVYY290 pKa = 9.7RR291 pKa = 11.84RR292 pKa = 11.84FVGGVPKK299 pKa = 9.84YY300 pKa = 9.19TGFHH304 pKa = 5.75VSRR307 pKa = 11.84PGEE310 pKa = 3.96RR311 pKa = 11.84MSQLVGKK318 pKa = 8.85YY319 pKa = 10.41NIGIDD324 pKa = 3.57FGVIFSFMRR333 pKa = 11.84KK334 pKa = 8.8NDD336 pKa = 3.45LYY338 pKa = 11.31FDD340 pKa = 3.51TTYY343 pKa = 11.36SVLRR347 pKa = 11.84KK348 pKa = 9.54LAGLSVGEE356 pKa = 4.2SFDD359 pKa = 3.79YY360 pKa = 11.35DD361 pKa = 3.43FDD363 pKa = 4.96KK364 pKa = 11.36NCKK367 pKa = 9.76EE368 pKa = 3.89PLDD371 pKa = 3.77YY372 pKa = 11.51DD373 pKa = 4.11EE374 pKa = 6.0IEE376 pKa = 4.14RR377 pKa = 11.84NYY379 pKa = 10.88LDD381 pKa = 5.12SEE383 pKa = 4.54EE384 pKa = 4.13MWQTTQDD391 pKa = 4.21EE392 pKa = 4.6ITKK395 pKa = 9.48MIYY398 pKa = 10.04GDD400 pKa = 3.8RR401 pKa = 11.84YY402 pKa = 10.86DD403 pKa = 4.04PVDD406 pKa = 3.17MHH408 pKa = 6.29VGKK411 pKa = 10.69RR412 pKa = 11.84YY413 pKa = 9.72GRR415 pKa = 11.84RR416 pKa = 11.84TRR418 pKa = 11.84DD419 pKa = 3.41QMPDD423 pKa = 3.15EE424 pKa = 4.22HH425 pKa = 7.13WYY427 pKa = 10.93GEE429 pKa = 4.37SCEE432 pKa = 4.27PPVLTVAPGLKK443 pKa = 9.53LDD445 pKa = 4.24PVIEE449 pKa = 4.38STDD452 pKa = 3.7DD453 pKa = 3.44DD454 pKa = 5.01CFDD457 pKa = 4.79DD458 pKa = 4.63ACSEE462 pKa = 4.43PGTCDD467 pKa = 3.22DD468 pKa = 4.45VAVSSPSFAEE478 pKa = 4.18DD479 pKa = 4.2DD480 pKa = 4.18EE481 pKa = 5.6LVQCSPKK488 pKa = 10.11PLSSVIARR496 pKa = 11.84AAICASAASAVALSLDD512 pKa = 3.41FSDD515 pKa = 5.01VKK517 pKa = 10.89RR518 pKa = 11.84QVLNSDD524 pKa = 4.08FSFVGKK530 pKa = 10.27LDD532 pKa = 3.74EE533 pKa = 5.53AVDD536 pKa = 3.84KK537 pKa = 11.39YY538 pKa = 11.32GADD541 pKa = 3.29AVHH544 pKa = 7.01EE545 pKa = 4.54YY546 pKa = 10.78VVSTPAFATYY556 pKa = 10.19RR557 pKa = 11.84DD558 pKa = 3.93YY559 pKa = 11.81HH560 pKa = 6.19NVTMFTEE567 pKa = 5.02TSSEE571 pKa = 3.93EE572 pKa = 4.12TLPDD576 pKa = 3.3MNGNTFFTKK585 pKa = 9.8IGEE588 pKa = 3.89YY589 pKa = 10.31RR590 pKa = 11.84IDD592 pKa = 3.75GKK594 pKa = 10.63RR595 pKa = 11.84APTTPEE601 pKa = 3.63RR602 pKa = 11.84RR603 pKa = 11.84KK604 pKa = 10.34KK605 pKa = 9.91PPKK608 pKa = 9.83NLSDD612 pKa = 3.27AAKK615 pKa = 10.24ARR617 pKa = 11.84EE618 pKa = 3.86AAVRR622 pKa = 11.84EE623 pKa = 4.29LIKK626 pKa = 10.87DD627 pKa = 3.88LSYY630 pKa = 11.44DD631 pKa = 3.46GEE633 pKa = 4.36DD634 pKa = 2.72WVTPEE639 pKa = 4.14NSRR642 pKa = 11.84KK643 pKa = 10.25NILDD647 pKa = 3.29SMRR650 pKa = 11.84AHH652 pKa = 7.24AGLACVEE659 pKa = 4.56SPPATEE665 pKa = 5.21DD666 pKa = 2.98DD667 pKa = 3.45WNRR670 pKa = 11.84ALEE673 pKa = 4.15KK674 pKa = 10.71GMEE677 pKa = 4.2VFDD680 pKa = 4.28CSPIEE685 pKa = 3.99SHH687 pKa = 6.86AEE689 pKa = 3.57RR690 pKa = 11.84GFEE693 pKa = 3.79GWYY696 pKa = 9.8KK697 pKa = 10.14QAATLQDD704 pKa = 3.42SSSGVSARR712 pKa = 11.84FRR714 pKa = 11.84SLSKK718 pKa = 10.47RR719 pKa = 11.84QWVQDD724 pKa = 3.46PQMFQVLIDD733 pKa = 3.96LVQCRR738 pKa = 11.84LVLMLIHH745 pKa = 6.55SRR747 pKa = 11.84FVQDD751 pKa = 3.5YY752 pKa = 10.39SPEE755 pKa = 4.23TVVKK759 pKa = 10.79YY760 pKa = 10.48GLKK763 pKa = 10.34DD764 pKa = 3.51VLEE767 pKa = 4.4VTVKK771 pKa = 10.66PEE773 pKa = 3.57SHH775 pKa = 6.53KK776 pKa = 10.69PEE778 pKa = 4.08KK779 pKa = 10.59AKK781 pKa = 10.6LGRR784 pKa = 11.84WRR786 pKa = 11.84LIWICSVIDD795 pKa = 3.89CLVQKK800 pKa = 10.44LLHH803 pKa = 6.3KK804 pKa = 10.44AVNARR809 pKa = 11.84DD810 pKa = 3.47IEE812 pKa = 4.21NYY814 pKa = 9.5QCGKK818 pKa = 7.65TLHH821 pKa = 6.45SAAGMGHH828 pKa = 6.63HH829 pKa = 7.7DD830 pKa = 3.83EE831 pKa = 5.81GIKK834 pKa = 9.44QLCRR838 pKa = 11.84TLKK841 pKa = 10.53EE842 pKa = 4.07LFGDD846 pKa = 3.44ATEE849 pKa = 6.25LITCDD854 pKa = 2.86ASMWDD859 pKa = 3.52FTMDD863 pKa = 3.19KK864 pKa = 10.03QAHH867 pKa = 5.59INAAKK872 pKa = 10.25RR873 pKa = 11.84RR874 pKa = 11.84VACCKK879 pKa = 10.03SEE881 pKa = 3.96PVARR885 pKa = 11.84LIMTLGHH892 pKa = 5.83VNYY895 pKa = 10.51KK896 pKa = 9.85HH897 pKa = 6.33VCEE900 pKa = 4.5CKK902 pKa = 10.24GDD904 pKa = 2.89IWRR907 pKa = 11.84CEE909 pKa = 3.85KK910 pKa = 10.9EE911 pKa = 4.25GVNGSGQCSTTSDD924 pKa = 3.28NTFSRR929 pKa = 11.84VGQARR934 pKa = 11.84ASGADD939 pKa = 3.12RR940 pKa = 11.84VIANGDD946 pKa = 3.47DD947 pKa = 3.27MAADD951 pKa = 4.26LGFDD955 pKa = 3.73PEE957 pKa = 3.99AAKK960 pKa = 10.94AFGTRR965 pKa = 11.84SRR967 pKa = 11.84DD968 pKa = 3.59VVVQDD973 pKa = 3.89ANLVPFTSHH982 pKa = 6.96HH983 pKa = 6.31INRR986 pKa = 11.84TTCTASYY993 pKa = 10.81DD994 pKa = 3.93RR995 pKa = 11.84PLKK998 pKa = 10.69LAFNLLSNCRR1008 pKa = 11.84SEE1010 pKa = 4.44DD1011 pKa = 2.95FGMRR1015 pKa = 11.84VDD1017 pKa = 3.21ALMYY1021 pKa = 9.49VVRR1024 pKa = 11.84NTPDD1028 pKa = 3.05ALAKK1032 pKa = 10.01FKK1034 pKa = 10.96KK1035 pKa = 9.97HH1036 pKa = 6.22LGPHH1040 pKa = 6.3AKK1042 pKa = 8.83GTDD1045 pKa = 3.58TCCVEE1050 pKa = 4.41MLWGAA1055 pKa = 3.62

Molecular weight: 116.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KEB0|A0A1L3KEB0_9VIRU Uncharacterized protein OS=Beihai sobemo-like virus 3 OX=1922700 PE=4 SV=1
MM1 pKa = 7.2PRR3 pKa = 11.84RR4 pKa = 11.84WGRR7 pKa = 11.84SSPSDD12 pKa = 3.21AVLVTGVQQGAAAAVPKK29 pKa = 10.77AFGSTAGRR37 pKa = 11.84RR38 pKa = 11.84WGNRR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84TSANSRR50 pKa = 11.84PNNRR54 pKa = 11.84WQRR57 pKa = 11.84RR58 pKa = 11.84KK59 pKa = 9.66RR60 pKa = 11.84AGIAEE65 pKa = 4.39SACWDD70 pKa = 3.61AFSPVHH76 pKa = 5.97LALPRR81 pKa = 11.84AVAPYY86 pKa = 9.03ATIRR90 pKa = 11.84TTAIWNPDD98 pKa = 2.64VDD100 pKa = 4.86AGDD103 pKa = 3.86GNKK106 pKa = 9.56FALFGPYY113 pKa = 10.02LDD115 pKa = 4.68GSADD119 pKa = 3.32AGQWSNLFSLTANTALSNPKK139 pKa = 8.26NTNGGAKK146 pKa = 9.58YY147 pKa = 10.38YY148 pKa = 10.4AFEE151 pKa = 4.28SMISGSWKK159 pKa = 9.84AASVTPAAFSIQIMNPEE176 pKa = 4.17ALQTSSGAVYY186 pKa = 10.46IGRR189 pKa = 11.84CKK191 pKa = 10.75NRR193 pKa = 11.84VSVQEE198 pKa = 4.17GVLTEE203 pKa = 4.28TWQLLAEE210 pKa = 4.29EE211 pKa = 4.78LVSYY215 pKa = 10.19SNPRR219 pKa = 11.84ICSAGKK225 pKa = 9.08LALRR229 pKa = 11.84GVQIDD234 pKa = 4.76AIPNNMSEE242 pKa = 4.44LANFTTLKK250 pKa = 10.05EE251 pKa = 4.33YY252 pKa = 10.87SDD254 pKa = 3.6HH255 pKa = 5.66TTNLSSTVPHH265 pKa = 6.8PVHH268 pKa = 6.79PSGFNPIFVYY278 pKa = 10.85NPDD281 pKa = 3.5GVKK284 pKa = 10.47LQILVCCEE292 pKa = 3.01WRR294 pKa = 11.84VRR296 pKa = 11.84FDD298 pKa = 3.72PSNPAYY304 pKa = 10.09AACSSHH310 pKa = 6.88KK311 pKa = 9.14PTSDD315 pKa = 3.67TTWHH319 pKa = 6.14KK320 pKa = 10.59HH321 pKa = 4.15MQHH324 pKa = 6.5ALAAGNGVLDD334 pKa = 3.64IAEE337 pKa = 4.11KK338 pKa = 8.57VARR341 pKa = 11.84YY342 pKa = 8.16GVPIAKK348 pKa = 10.06AAGYY352 pKa = 10.32LGGAA356 pKa = 4.15

Molecular weight: 38.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1411

356

1055

705.5

77.65

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.993 ± 1.666

2.693 ± 0.481

6.378 ± 1.302

5.457 ± 1.13

4.04 ± 0.453

7.583 ± 0.135

2.197 ± 0.024

3.614 ± 0.152

5.386 ± 0.694

7.016 ± 0.265

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.268 ± 0.412

3.827 ± 1.123

4.819 ± 0.784

2.693 ± 0.189

5.953 ± 0.108

7.442 ± 0.739

5.67 ± 0.109

7.796 ± 0.637

1.701 ± 0.529

3.473 ± 0.183
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski