Tenacibaculum todarodis

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tenacibaculum

Average proteome isoelectric point is 6.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2636 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3JGQ9|A0A1L3JGQ9_9FLAO Uncharacterized protein OS=Tenacibaculum todarodis OX=1850252 GN=LPB136_02460 PE=4 SV=1
MM1 pKa = 7.59KK2 pKa = 10.37KK3 pKa = 10.18LLPLIFLFLTFNLFAQKK20 pKa = 9.71EE21 pKa = 4.13ANIWYY26 pKa = 9.23FGRR29 pKa = 11.84NAGIDD34 pKa = 3.78FSTTPPTALTDD45 pKa = 3.84GQLNTLEE52 pKa = 4.77GCSSFSDD59 pKa = 3.79SNGNLLFYY67 pKa = 11.05VGAPNSADD75 pKa = 3.13NRR77 pKa = 11.84LTVWDD82 pKa = 4.11KK83 pKa = 11.06NHH85 pKa = 7.17NIMNYY90 pKa = 8.77TNGNIGNNLLGHH102 pKa = 6.25TSSTQSAMIIPKK114 pKa = 9.87PEE116 pKa = 3.9STTIFYY122 pKa = 10.85LFTVDD127 pKa = 5.49DD128 pKa = 4.96GPGSGGAEE136 pKa = 3.81GMNLYY141 pKa = 9.5TIDD144 pKa = 3.42MSLNGGLGQLIDD156 pKa = 4.13EE157 pKa = 5.56DD158 pKa = 4.57GDD160 pKa = 3.85GDD162 pKa = 4.24FFEE165 pKa = 5.57DD166 pKa = 4.89LSDD169 pKa = 3.53IRR171 pKa = 11.84KK172 pKa = 9.56NDD174 pKa = 3.03WTEE177 pKa = 3.24KK178 pKa = 8.59VAAVRR183 pKa = 11.84GANCNEE189 pKa = 3.71FWVVSVVNNTFFSYY203 pKa = 10.38QVTSSGVNLTPVTSPVSTPAQRR225 pKa = 11.84RR226 pKa = 11.84GYY228 pKa = 10.71LKK230 pKa = 10.79LSPDD234 pKa = 3.37GSKK237 pKa = 10.66LAIANQDD244 pKa = 3.4SNAMVYY250 pKa = 10.63SFDD253 pKa = 3.56NSTGRR258 pKa = 11.84VSNDD262 pKa = 3.47GIILLNTGGDD272 pKa = 3.73GQPYY276 pKa = 9.56GVEE279 pKa = 4.03FSIDD283 pKa = 3.38SKK285 pKa = 11.32KK286 pKa = 11.01LYY288 pKa = 10.36FSTVSSFRR296 pKa = 11.84QDD298 pKa = 3.0LSEE301 pKa = 4.58PEE303 pKa = 3.52VTYY306 pKa = 11.04RR307 pKa = 11.84LFQFDD312 pKa = 5.94LIATDD317 pKa = 3.63IPGSKK322 pKa = 10.17SEE324 pKa = 4.33IYY326 pKa = 10.43RR327 pKa = 11.84NNNGFRR333 pKa = 11.84GALQLGPDD341 pKa = 3.48GRR343 pKa = 11.84IYY345 pKa = 10.56ATIPQAYY352 pKa = 9.11DD353 pKa = 3.65DD354 pKa = 4.79PNGDD358 pKa = 3.5ARR360 pKa = 11.84FLSVIEE366 pKa = 4.44NPTANATDD374 pKa = 4.14IIFTQNAIDD383 pKa = 3.78LGGRR387 pKa = 11.84TATQGLPPFISSLLLGIEE405 pKa = 4.43LTDD408 pKa = 3.37TTNNQIISDD417 pKa = 4.48EE418 pKa = 3.98IVQYY422 pKa = 11.12CLTEE426 pKa = 4.44NILIQPEE433 pKa = 4.22AVTPQTGTTVDD444 pKa = 4.01YY445 pKa = 10.7EE446 pKa = 4.21WTFDD450 pKa = 4.26DD451 pKa = 4.52GTTTSIISTTRR462 pKa = 11.84DD463 pKa = 3.02LTLNNIQFNNAGEE476 pKa = 4.19YY477 pKa = 9.64TLTVTLTDD485 pKa = 3.31EE486 pKa = 4.97CGNPTKK492 pKa = 11.03LEE494 pKa = 3.96GTFTIEE500 pKa = 4.17VYY502 pKa = 11.3NNLTPVAPTDD512 pKa = 4.44INFCDD517 pKa = 4.39DD518 pKa = 5.49DD519 pKa = 6.71GDD521 pKa = 4.03GLQAFDD527 pKa = 4.52FQTDD531 pKa = 3.96LTPTILNGQDD541 pKa = 3.2PTLVEE546 pKa = 3.92VVYY549 pKa = 11.1YY550 pKa = 8.24PTEE553 pKa = 3.86NDD555 pKa = 3.54ALNNTAPITNPFTPTAFYY573 pKa = 10.64DD574 pKa = 3.82GPIWVRR580 pKa = 11.84VHH582 pKa = 5.75NQRR585 pKa = 11.84APNACNEE592 pKa = 4.21VYY594 pKa = 10.72SFNLQITGEE603 pKa = 4.3PVAQTPDD610 pKa = 4.57DD611 pKa = 3.85IVACDD616 pKa = 3.66GDD618 pKa = 4.17GTDD621 pKa = 5.12SVDD624 pKa = 4.59NDD626 pKa = 3.37GLYY629 pKa = 11.1DD630 pKa = 3.82NFILNTRR637 pKa = 11.84DD638 pKa = 3.5AQILGALSEE647 pKa = 4.34TQYY650 pKa = 10.32TVSYY654 pKa = 8.11HH655 pKa = 5.96TSLADD660 pKa = 3.5AQTSATTNAIDD671 pKa = 4.85KK672 pKa = 7.54NTNYY676 pKa = 10.14QSGNDD681 pKa = 3.53IIFVRR686 pKa = 11.84VEE688 pKa = 3.63NVDD691 pKa = 3.59NVNCNDD697 pKa = 3.43TSQSFEE703 pKa = 5.16LIVNPLPTPVDD714 pKa = 3.74VTILQCDD721 pKa = 3.67DD722 pKa = 4.48DD723 pKa = 6.7ADD725 pKa = 4.06LVADD729 pKa = 3.96INLTLEE735 pKa = 4.1QEE737 pKa = 4.65NISTNHH743 pKa = 4.96TNEE746 pKa = 3.63TFEE749 pKa = 4.34YY750 pKa = 8.49FTTQAEE756 pKa = 4.75AIAGTPVIANPIAYY770 pKa = 8.22NASNGDD776 pKa = 3.78QVWVRR781 pKa = 11.84TISTEE786 pKa = 3.21NCYY789 pKa = 10.48RR790 pKa = 11.84ITTIDD795 pKa = 3.54IIISFASDD803 pKa = 3.07VPYY806 pKa = 10.68NRR808 pKa = 11.84NFIEE812 pKa = 5.29CDD814 pKa = 3.32DD815 pKa = 4.44FLDD818 pKa = 5.25LDD820 pKa = 4.54GNDD823 pKa = 3.61TPGANDD829 pKa = 3.75DD830 pKa = 3.82TDD832 pKa = 4.98GIATFDD838 pKa = 3.74FSAATSEE845 pKa = 4.34ILGHH849 pKa = 6.69PSLAGALNLDD859 pKa = 3.35VKK861 pKa = 10.89YY862 pKa = 10.83FEE864 pKa = 5.21TIADD868 pKa = 4.06RR869 pKa = 11.84ASEE872 pKa = 4.05INEE875 pKa = 3.53ISDD878 pKa = 3.86ISNHH882 pKa = 6.13RR883 pKa = 11.84NNNDD887 pKa = 3.37PAYY890 pKa = 10.63ANLQTIYY897 pKa = 11.0AKK899 pKa = 10.38IINTVNNDD907 pKa = 3.4CTGLAEE913 pKa = 4.68LTLQTTPVPVANAINPDD930 pKa = 3.61NEE932 pKa = 4.32YY933 pKa = 10.51EE934 pKa = 4.1LCDD937 pKa = 4.52DD938 pKa = 5.14FVDD941 pKa = 4.1ADD943 pKa = 3.87GSNGIIQSFDD953 pKa = 3.88LEE955 pKa = 4.45SQTAAILGSQDD966 pKa = 3.06PLAYY970 pKa = 9.46TITYY974 pKa = 9.58HH975 pKa = 7.06EE976 pKa = 4.53SAADD980 pKa = 3.61ATSGANPLASPYY992 pKa = 10.84TNITRR997 pKa = 11.84DD998 pKa = 3.09RR999 pKa = 11.84QTIYY1003 pKa = 11.26ARR1005 pKa = 11.84VSGNGCYY1012 pKa = 9.68FDD1014 pKa = 5.42RR1015 pKa = 11.84YY1016 pKa = 10.82SFDD1019 pKa = 2.99IVVNSLPIANQLNMANTLEE1038 pKa = 4.19VCDD1041 pKa = 5.14DD1042 pKa = 4.41DD1043 pKa = 7.03ADD1045 pKa = 4.1GSATNGFVQNIDD1057 pKa = 4.01LEE1059 pKa = 4.66TLTTTILGTQDD1070 pKa = 3.18PTNFTVTYY1078 pKa = 7.19HH1079 pKa = 5.98TSYY1082 pKa = 11.87ALAQTGAIPITGMYY1096 pKa = 10.63SNTTQGGDD1104 pKa = 3.14TVYY1107 pKa = 10.95VRR1109 pKa = 11.84IVNNTTTCVNDD1120 pKa = 3.49TFNFQVLINAEE1131 pKa = 4.09PLANPDD1137 pKa = 3.65NLVSNLSEE1145 pKa = 4.66CDD1147 pKa = 3.19NDD1149 pKa = 5.25ADD1151 pKa = 4.81GDD1153 pKa = 4.11DD1154 pKa = 4.32ANGFVQSFDD1163 pKa = 4.47LEE1165 pKa = 4.36SQIPDD1170 pKa = 3.08ILGDD1174 pKa = 3.53PTVQDD1179 pKa = 3.37EE1180 pKa = 4.74DD1181 pKa = 4.08DD1182 pKa = 4.39FNVTFHH1188 pKa = 6.79LTQADD1193 pKa = 3.92ATDD1196 pKa = 4.2GSAPQSSPFTNTDD1209 pKa = 2.6INQQTIFVRR1218 pKa = 11.84IEE1220 pKa = 3.74NKK1222 pKa = 9.25ATGCVNDD1229 pKa = 5.17DD1230 pKa = 3.54LTFDD1234 pKa = 4.17VIVNSLPDD1242 pKa = 3.68FVVTSPQIVCLNNPPLTLTVEE1263 pKa = 4.35NPNDD1267 pKa = 3.14VYY1269 pKa = 10.84TYY1271 pKa = 10.46QWFDD1275 pKa = 2.92ASGNPLGTAITQDD1288 pKa = 3.33VTVGGDD1294 pKa = 3.53YY1295 pKa = 11.01SVTATTTNGTMCPRR1309 pKa = 11.84TRR1311 pKa = 11.84TITVNEE1317 pKa = 4.23SNIATITDD1325 pKa = 3.7DD1326 pKa = 5.93DD1327 pKa = 3.81ITIVDD1332 pKa = 3.86DD1333 pKa = 4.41SEE1335 pKa = 4.67NNSITINDD1343 pKa = 3.89SNLGEE1348 pKa = 4.26GDD1350 pKa = 3.89YY1351 pKa = 11.29EE1352 pKa = 4.31FALIDD1357 pKa = 3.77EE1358 pKa = 4.75NGFTIVNYY1366 pKa = 9.71QDD1368 pKa = 3.31EE1369 pKa = 4.72AFFDD1373 pKa = 4.08GLNGGIYY1380 pKa = 9.41TIHH1383 pKa = 7.17IRR1385 pKa = 11.84DD1386 pKa = 3.61KK1387 pKa = 10.47NGCGVTTHH1395 pKa = 6.44TVPVIEE1401 pKa = 4.59FPKK1404 pKa = 10.59FFTPNNDD1411 pKa = 3.67GIKK1414 pKa = 10.46DD1415 pKa = 3.26VWTIKK1420 pKa = 9.08GTNATFFPINTVVIFNRR1437 pKa = 11.84QGKK1440 pKa = 9.7IINQFNINAYY1450 pKa = 9.53GWDD1453 pKa = 3.26GHH1455 pKa = 6.19YY1456 pKa = 10.1KK1457 pKa = 10.35DD1458 pKa = 5.42KK1459 pKa = 11.46AMPSNNYY1466 pKa = 7.47WFKK1469 pKa = 10.95ATLVDD1474 pKa = 3.57AKK1476 pKa = 10.84GITRR1480 pKa = 11.84TRR1482 pKa = 11.84SGYY1485 pKa = 9.96FSLIRR1490 pKa = 11.84RR1491 pKa = 4.0

Molecular weight:
162.78 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3JFN5|A0A1L3JFN5_9FLAO Uncharacterized protein OS=Tenacibaculum todarodis OX=1850252 GN=LPB136_00550 PE=4 SV=1
MM1 pKa = 7.54SVRR4 pKa = 11.84KK5 pKa = 9.63LKK7 pKa = 10.48PVTPGQRR14 pKa = 11.84FRR16 pKa = 11.84VVNGFDD22 pKa = 5.49AITTDD27 pKa = 3.56KK28 pKa = 11.07PEE30 pKa = 4.39KK31 pKa = 10.58SLLAPNKK38 pKa = 10.02RR39 pKa = 11.84SGGRR43 pKa = 11.84NSQGRR48 pKa = 11.84MTTRR52 pKa = 11.84NIGGGHH58 pKa = 4.58KK59 pKa = 9.49QKK61 pKa = 10.8YY62 pKa = 9.64RR63 pKa = 11.84IIDD66 pKa = 3.67FKK68 pKa = 10.99KK69 pKa = 10.17DD70 pKa = 3.34KK71 pKa = 10.76QGIPATVKK79 pKa = 10.01TIEE82 pKa = 4.0YY83 pKa = 9.86DD84 pKa = 3.47PNRR87 pKa = 11.84TAFIALVFYY96 pKa = 11.16ADD98 pKa = 3.36GEE100 pKa = 4.23KK101 pKa = 10.28RR102 pKa = 11.84YY103 pKa = 10.74VIAQNGLKK111 pKa = 10.19VGQTIVSGRR120 pKa = 11.84EE121 pKa = 3.72ATPEE125 pKa = 3.74IGNALYY131 pKa = 10.83LSDD134 pKa = 4.56IPLGTTISCIEE145 pKa = 4.03LRR147 pKa = 11.84PGQGAVMARR156 pKa = 11.84SAGSFAQLMARR167 pKa = 11.84DD168 pKa = 3.96GKK170 pKa = 10.52YY171 pKa = 9.12ATVKK175 pKa = 10.42LPSGEE180 pKa = 4.06TRR182 pKa = 11.84LILLTCMATIGVVSNSDD199 pKa = 3.21HH200 pKa = 6.09QLLVSGKK207 pKa = 9.49AGRR210 pKa = 11.84SRR212 pKa = 11.84WLGRR216 pKa = 11.84RR217 pKa = 11.84PRR219 pKa = 11.84TNPVRR224 pKa = 11.84MNPVDD229 pKa = 3.43HH230 pKa = 7.07PMGGGEE236 pKa = 3.89GRR238 pKa = 11.84ASGGHH243 pKa = 5.13PRR245 pKa = 11.84SRR247 pKa = 11.84NGIPAKK253 pKa = 10.28GYY255 pKa = 7.21KK256 pKa = 8.8TRR258 pKa = 11.84SKK260 pKa = 9.63TKK262 pKa = 10.22ASNKK266 pKa = 9.95YY267 pKa = 9.56IIEE270 pKa = 4.06RR271 pKa = 11.84RR272 pKa = 11.84KK273 pKa = 10.1KK274 pKa = 9.82

Molecular weight:
29.9 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2636

0

2636

903262

50

6670

342.7

38.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.134 ± 0.055

0.686 ± 0.016

5.419 ± 0.079

6.669 ± 0.053

5.385 ± 0.069

6.204 ± 0.053

1.599 ± 0.029

8.137 ± 0.054

8.714 ± 0.112

9.063 ± 0.075

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.003 ± 0.034

6.674 ± 0.063

3.199 ± 0.039

3.221 ± 0.032

3.064 ± 0.044

6.506 ± 0.047

6.269 ± 0.166

6.285 ± 0.06

0.943 ± 0.019

3.824 ± 0.042

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski