Okra enation leaf curl betasatellite [India:Sonipat:EL10:2006]

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite; unclassified Betasatellite; Okra enation leaf curl betasatellite

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E7BNA9|E7BNA9_9VIRU C1 protein OS=Okra enation leaf curl betasatellite [India:Sonipat:EL10:2006] OX=908277 GN=C1 PE=4 SV=1
MM1 pKa = 7.69KK2 pKa = 10.24ISIHH6 pKa = 6.64FIYY9 pKa = 10.39IFISNIYY16 pKa = 9.0IKK18 pKa = 10.0RR19 pKa = 11.84TIKK22 pKa = 8.02MTRR25 pKa = 11.84FSKK28 pKa = 10.35NRR30 pKa = 11.84EE31 pKa = 4.0GIVFKK36 pKa = 11.21VDD38 pKa = 3.01VRR40 pKa = 11.84LMQQQRR46 pKa = 11.84ISVHH50 pKa = 4.7MQISSTRR57 pKa = 11.84SPAISTRR64 pKa = 11.84TFIIDD69 pKa = 3.18YY70 pKa = 8.42TYY72 pKa = 10.85QQLHH76 pKa = 6.45IPFDD80 pKa = 4.34FNGLEE85 pKa = 4.12GTITSTFKK93 pKa = 9.83FHH95 pKa = 6.13YY96 pKa = 8.58WGSKK100 pKa = 9.77AEE102 pKa = 4.51EE103 pKa = 4.2ILEE106 pKa = 3.91EE107 pKa = 4.85DD108 pKa = 4.65IIRR111 pKa = 11.84MGDD114 pKa = 2.75ISTIEE119 pKa = 4.07SPEE122 pKa = 3.74IMGMDD127 pKa = 3.36VNEE130 pKa = 4.77PVTIDD135 pKa = 3.29NKK137 pKa = 10.73IIII140 pKa = 4.47

Molecular weight: 16.41 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E7BNA9|E7BNA9_9VIRU C1 protein OS=Okra enation leaf curl betasatellite [India:Sonipat:EL10:2006] OX=908277 GN=C1 PE=4 SV=1
MM1 pKa = 7.69KK2 pKa = 10.24ISIHH6 pKa = 6.64FIYY9 pKa = 10.39IFISNIYY16 pKa = 9.0IKK18 pKa = 10.0RR19 pKa = 11.84TIKK22 pKa = 8.02MTRR25 pKa = 11.84FSKK28 pKa = 10.35NRR30 pKa = 11.84EE31 pKa = 4.0GIVFKK36 pKa = 11.21VDD38 pKa = 3.01VRR40 pKa = 11.84LMQQQRR46 pKa = 11.84ISVHH50 pKa = 4.7MQISSTRR57 pKa = 11.84SPAISTRR64 pKa = 11.84TFIIDD69 pKa = 3.18YY70 pKa = 8.42TYY72 pKa = 10.85QQLHH76 pKa = 6.45IPFDD80 pKa = 4.34FNGLEE85 pKa = 4.12GTITSTFKK93 pKa = 9.83FHH95 pKa = 6.13YY96 pKa = 8.58WGSKK100 pKa = 9.77AEE102 pKa = 4.51EE103 pKa = 4.2ILEE106 pKa = 3.91EE107 pKa = 4.85DD108 pKa = 4.65IIRR111 pKa = 11.84MGDD114 pKa = 2.75ISTIEE119 pKa = 4.07SPEE122 pKa = 3.74IMGMDD127 pKa = 3.36VNEE130 pKa = 4.77PVTIDD135 pKa = 3.29NKK137 pKa = 10.73IIII140 pKa = 4.47

Molecular weight: 16.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

140

140

140

140.0

16.41

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

1.429 ± 0.0

0.0 ± 0.0

5.0 ± 0.0

6.429 ± 0.0

6.429 ± 0.0

4.286 ± 0.0

2.857 ± 0.0

18.571 ± 0.0

5.714 ± 0.0

2.857 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.0 ± 0.0

3.571 ± 0.0

2.857 ± 0.0

4.286 ± 0.0

5.714 ± 0.0

8.571 ± 0.0

7.857 ± 0.0

4.286 ± 0.0

0.714 ± 0.0

3.571 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski