Changjiang picorna-like virus 4

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 5.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A1L3KNW7|A0A1L3KNW7_9VIRU Uncharacterized protein OS=Changjiang picorna-like virus 4 OX=1922793 PE=4 SV=1
MM1 pKa = 7.44TDD3 pKa = 3.46AVPFSEE9 pKa = 4.48DD10 pKa = 2.99AVGEE14 pKa = 4.31SEE16 pKa = 4.93IKK18 pKa = 10.39SQTVTFLDD26 pKa = 3.69GDD28 pKa = 3.91AGVLIDD34 pKa = 4.37RR35 pKa = 11.84TYY37 pKa = 9.99STNPFAIVDD46 pKa = 3.84DD47 pKa = 4.38TKK49 pKa = 11.2DD50 pKa = 3.02ISLGSFLARR59 pKa = 11.84PTLIDD64 pKa = 3.32TLTWSTSDD72 pKa = 3.28VEE74 pKa = 5.6GVFKK78 pKa = 10.17TIKK81 pKa = 9.81PWFLFLNNTVIKK93 pKa = 10.58KK94 pKa = 10.4KK95 pKa = 10.41LDD97 pKa = 3.07NFAYY101 pKa = 9.71IRR103 pKa = 11.84GNLHH107 pKa = 5.31VKK109 pKa = 9.81VVINATPFQYY119 pKa = 11.37GLMRR123 pKa = 11.84MDD125 pKa = 3.84YY126 pKa = 10.04EE127 pKa = 4.18PLVGNVTSKK136 pKa = 10.0IRR138 pKa = 11.84QPRR141 pKa = 11.84TSDD144 pKa = 2.87VRR146 pKa = 11.84TLFIPHH152 pKa = 6.06SQLPGFFIQPAANSGGEE169 pKa = 3.76IVLPFLYY176 pKa = 9.96PRR178 pKa = 11.84NFLDD182 pKa = 3.44LTSANDD188 pKa = 3.65CNNFGTLYY196 pKa = 10.6YY197 pKa = 10.53LIYY200 pKa = 10.48DD201 pKa = 3.92ALKK204 pKa = 8.98VASSGGSTSVTVRR217 pKa = 11.84TYY219 pKa = 10.52AWMEE223 pKa = 4.05DD224 pKa = 3.41VHH226 pKa = 8.36LMGSTIKK233 pKa = 10.71LALQGKK239 pKa = 9.43DD240 pKa = 3.34EE241 pKa = 4.65YY242 pKa = 11.02DD243 pKa = 3.98DD244 pKa = 4.59KK245 pKa = 11.74DD246 pKa = 3.84GAVSKK251 pKa = 9.78PATAIASAAAMLSSIPVIGPFARR274 pKa = 11.84ATSIGASAVASIAQIFGYY292 pKa = 9.41TNTPVIEE299 pKa = 4.83NIHH302 pKa = 6.05GFQPMNAPMLASAHH316 pKa = 6.59IGTPLQKK323 pKa = 9.97LTLDD327 pKa = 4.18PKK329 pKa = 10.77QEE331 pKa = 3.99LSIDD335 pKa = 3.78PAMHH339 pKa = 7.05GISPHH344 pKa = 7.2DD345 pKa = 3.89EE346 pKa = 4.17LSLKK350 pKa = 10.79SFIGKK355 pKa = 9.59EE356 pKa = 3.93SYY358 pKa = 8.89LTQFTWATSDD368 pKa = 3.69AAGTTIGGMAISPDD382 pKa = 3.37VCQTDD387 pKa = 3.54SLINGTSTIVGYY399 pKa = 10.3RR400 pKa = 11.84FYY402 pKa = 9.64EE403 pKa = 4.31TPLSYY408 pKa = 11.0LSRR411 pKa = 11.84CFFNWRR417 pKa = 11.84GDD419 pKa = 3.21IEE421 pKa = 4.24IRR423 pKa = 11.84LKK425 pKa = 10.3VVCTKK430 pKa = 8.88FHH432 pKa = 6.9KK433 pKa = 10.62GRR435 pKa = 11.84LKK437 pKa = 10.39ISYY440 pKa = 9.98DD441 pKa = 3.38PVGNLSATNPDD452 pKa = 3.37EE453 pKa = 4.18NVVYY457 pKa = 9.99TEE459 pKa = 4.39IFDD462 pKa = 4.08IEE464 pKa = 4.68DD465 pKa = 3.69GADD468 pKa = 3.05IKK470 pKa = 11.11IKK472 pKa = 10.73VPYY475 pKa = 9.03HH476 pKa = 5.8QDD478 pKa = 3.49RR479 pKa = 11.84GWMRR483 pKa = 11.84CGRR486 pKa = 11.84SLQEE490 pKa = 3.56GWGISVPAPRR500 pKa = 11.84FGTDD504 pKa = 2.6NGTLKK509 pKa = 9.31ITVLNSLVAPASGANVAVMIFIKK532 pKa = 10.54GGEE535 pKa = 4.12NFEE538 pKa = 4.31FANPSDD544 pKa = 4.41HH545 pKa = 7.08IGNNSIAQGWTPSFFALQGKK565 pKa = 9.93DD566 pKa = 3.39EE567 pKa = 4.2VDD569 pKa = 3.12KK570 pKa = 11.22VARR573 pKa = 11.84EE574 pKa = 3.97VQFGDD579 pKa = 3.23NTINHH584 pKa = 6.82PNRR587 pKa = 11.84YY588 pKa = 9.58DD589 pKa = 3.4MNFGEE594 pKa = 4.74PVGSLRR600 pKa = 11.84NLLHH604 pKa = 6.66RR605 pKa = 11.84HH606 pKa = 5.7QIVQTIPISTNTSNIYY622 pKa = 8.51NTIVKK627 pKa = 9.38QFNRR631 pKa = 11.84MPTPNGYY638 pKa = 9.51NPNAVTQAARR648 pKa = 11.84IVGAGNTTYY657 pKa = 10.89SYY659 pKa = 11.97GNMPLLNYY667 pKa = 9.99IATCFVAYY675 pKa = 9.93RR676 pKa = 11.84GSVNYY681 pKa = 10.42ALTVSPDD688 pKa = 2.96AYY690 pKa = 10.57GQVADD695 pKa = 4.13IRR697 pKa = 11.84VTRR700 pKa = 11.84NQAPMTGAGDD710 pKa = 2.76AWYY713 pKa = 9.85GVRR716 pKa = 11.84TLAGFTPTDD725 pKa = 3.65SVKK728 pKa = 10.96ANYY731 pKa = 10.21LNWTNNFYY739 pKa = 11.1DD740 pKa = 4.19GLAGTAINSTNTNSSLTFNFPDD762 pKa = 3.4YY763 pKa = 11.32NNYY766 pKa = 9.61NFALADD772 pKa = 3.63YY773 pKa = 9.6PNYY776 pKa = 9.68TFGYY780 pKa = 9.07QADD783 pKa = 4.06GTEE786 pKa = 4.1NQHH789 pKa = 6.63VEE791 pKa = 4.12FSMLLKK797 pKa = 10.59NAAAATNTQSTITMQIAAGAGPDD820 pKa = 3.91FTCLYY825 pKa = 9.26FLCCPTTDD833 pKa = 3.86YY834 pKa = 11.28QIVAPTPVV842 pKa = 2.76

Molecular weight:
92.02 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A1L3KNW7|A0A1L3KNW7_9VIRU Uncharacterized protein OS=Changjiang picorna-like virus 4 OX=1922793 PE=4 SV=1
MM1 pKa = 7.19QARR4 pKa = 11.84KK5 pKa = 9.98SYY7 pKa = 10.37LYY9 pKa = 10.77EE10 pKa = 4.19KK11 pKa = 9.59MQFYY15 pKa = 11.45VNDD18 pKa = 3.61EE19 pKa = 4.11KK20 pKa = 11.59VAMGVGRR27 pKa = 11.84IIEE30 pKa = 4.43CSVSSIMLVTRR41 pKa = 11.84VEE43 pKa = 4.31TPLQFLAWFNLTVASITGRR62 pKa = 11.84AAGEE66 pKa = 4.04YY67 pKa = 8.1IDD69 pKa = 5.73RR70 pKa = 11.84YY71 pKa = 10.22IFGVKK76 pKa = 9.51NRR78 pKa = 11.84EE79 pKa = 3.98DD80 pKa = 3.67PRR82 pKa = 11.84VQGAVEE88 pKa = 4.12DD89 pKa = 4.71FVRR92 pKa = 11.84SARR95 pKa = 11.84TGLINLKK102 pKa = 10.28HH103 pKa = 5.88MSEE106 pKa = 4.33NPVFSRR112 pKa = 11.84IVKK115 pKa = 9.68AYY117 pKa = 9.95KK118 pKa = 9.96FLLVQGFLKK127 pKa = 10.89KK128 pKa = 9.89MGLEE132 pKa = 4.14VNDD135 pKa = 3.8EE136 pKa = 4.17EE137 pKa = 4.92FSKK140 pKa = 11.12FEE142 pKa = 3.76QRR144 pKa = 11.84ALLIEE149 pKa = 4.23YY150 pKa = 10.12SSKK153 pKa = 11.0QEE155 pKa = 4.06FLFHH159 pKa = 6.03MVEE162 pKa = 4.12SMLFLTEE169 pKa = 3.91KK170 pKa = 10.47FFEE173 pKa = 4.18FRR175 pKa = 11.84NTGDD179 pKa = 3.24VSCFMHH185 pKa = 7.01SEE187 pKa = 4.61TIYY190 pKa = 10.97SKK192 pKa = 10.58WSTEE196 pKa = 3.47ADD198 pKa = 3.32KK199 pKa = 11.27LLNLAPFTGNLEE211 pKa = 4.12PHH213 pKa = 5.65GTSYY217 pKa = 10.92FQFRR221 pKa = 11.84SDD223 pKa = 3.89LMSLIEE229 pKa = 4.82KK230 pKa = 10.47GEE232 pKa = 4.18AYY234 pKa = 8.97TKK236 pKa = 10.79YY237 pKa = 10.04ISQSSNVEE245 pKa = 3.47IVAMKK250 pKa = 10.41RR251 pKa = 11.84RR252 pKa = 11.84LNSLRR257 pKa = 11.84ILKK260 pKa = 8.52NTEE263 pKa = 3.41ITRR266 pKa = 11.84KK267 pKa = 9.34AAQQMRR273 pKa = 11.84EE274 pKa = 4.21CPFGVLIHH282 pKa = 6.27GRR284 pKa = 11.84SGQAKK289 pKa = 8.4STFTRR294 pKa = 11.84ILFYY298 pKa = 10.99HH299 pKa = 6.45FGKK302 pKa = 10.69VFGLPIGDD310 pKa = 3.82DD311 pKa = 4.39FIYY314 pKa = 10.38FRR316 pKa = 11.84NPLEE320 pKa = 4.05QWWNGFDD327 pKa = 3.46SSKK330 pKa = 10.0WCIVLDD336 pKa = 5.03DD337 pKa = 4.07IACFRR342 pKa = 11.84SGALSEE348 pKa = 4.46VDD350 pKa = 3.76PSTKK354 pKa = 10.23EE355 pKa = 3.49IIFIQNMTPTMPPQASLEE373 pKa = 4.43DD374 pKa = 3.6KK375 pKa = 11.04GKK377 pKa = 8.57TPILAKK383 pKa = 10.55LVIATTNTDD392 pKa = 3.34HH393 pKa = 7.51LNANDD398 pKa = 4.12FFEE401 pKa = 5.45CPLAVRR407 pKa = 11.84RR408 pKa = 11.84RR409 pKa = 11.84LPFVVTVEE417 pKa = 4.01VKK419 pKa = 10.45PEE421 pKa = 3.64YY422 pKa = 9.48RR423 pKa = 11.84QKK425 pKa = 11.48DD426 pKa = 3.51STFADD431 pKa = 3.61SEE433 pKa = 4.39KK434 pKa = 10.66MNTEE438 pKa = 4.02PGTYY442 pKa = 8.91PDD444 pKa = 3.6FWIITLKK451 pKa = 10.7RR452 pKa = 11.84IVPLMEE458 pKa = 3.96GTRR461 pKa = 11.84EE462 pKa = 3.67RR463 pKa = 11.84ATLEE467 pKa = 4.66KK468 pKa = 10.7VGEE471 pKa = 3.91WSNIYY476 pKa = 10.41EE477 pKa = 4.21FLDD480 pKa = 3.91VYY482 pKa = 10.78TMSIKK487 pKa = 10.59AHH489 pKa = 6.41AASQFKK495 pKa = 10.22AVKK498 pKa = 10.23SNSLVSAVDD507 pKa = 3.73LCAVCYY513 pKa = 9.94RR514 pKa = 11.84PQVACKK520 pKa = 9.71CDD522 pKa = 3.56SFTLQAQEE530 pKa = 4.22FEE532 pKa = 4.88EE533 pKa = 4.41NVTTNWVLPEE543 pKa = 4.06RR544 pKa = 11.84QNSRR548 pKa = 11.84VVRR551 pKa = 11.84YY552 pKa = 9.16CKK554 pKa = 9.53QALVYY559 pKa = 9.84TVDD562 pKa = 3.65QIAEE566 pKa = 4.24LVVRR570 pKa = 11.84ALLFLGCLIVRR581 pKa = 11.84KK582 pKa = 9.98SKK584 pKa = 10.52EE585 pKa = 3.67RR586 pKa = 11.84VLRR589 pKa = 11.84QVNRR593 pKa = 11.84FCSEE597 pKa = 3.41NKK599 pKa = 10.02AIQLAGRR606 pKa = 11.84VATRR610 pKa = 11.84VVKK613 pKa = 10.26PKK615 pKa = 10.74HH616 pKa = 5.17FDD618 pKa = 3.0AYY620 pKa = 9.93ILIGGIMAMCCGSYY634 pKa = 10.37YY635 pKa = 10.79YY636 pKa = 10.36YY637 pKa = 11.06VKK639 pKa = 10.72SQEE642 pKa = 4.32EE643 pKa = 4.31KK644 pKa = 10.34PKK646 pKa = 10.6EE647 pKa = 4.0KK648 pKa = 10.25PKK650 pKa = 10.57QCGLGADD657 pKa = 3.88DD658 pKa = 5.07CKK660 pKa = 10.84CKK662 pKa = 9.99HH663 pKa = 4.84WHH665 pKa = 6.79CDD667 pKa = 3.39YY668 pKa = 11.14EE669 pKa = 4.38EE670 pKa = 4.73CKK672 pKa = 11.03GEE674 pKa = 4.11CTDD677 pKa = 3.37MGGIPKK683 pKa = 10.07HH684 pKa = 5.73YY685 pKa = 9.61VPQGNVMNTTEE696 pKa = 4.28EE697 pKa = 4.28DD698 pKa = 3.65LEE700 pKa = 4.24QSKK703 pKa = 10.97SEE705 pKa = 4.03NVWYY709 pKa = 10.11NDD711 pKa = 2.93SVAITSFDD719 pKa = 3.92LPSSSLSLSGAKK731 pKa = 9.56PEE733 pKa = 3.82KK734 pKa = 10.55LRR736 pKa = 11.84DD737 pKa = 3.46IFHH740 pKa = 7.35KK741 pKa = 9.3NLCYY745 pKa = 10.27ISVRR749 pKa = 11.84TPGVNIKK756 pKa = 10.11SMCGIFLKK764 pKa = 10.99GNTCLVPAHH773 pKa = 6.68IFGNNEE779 pKa = 3.49GEE781 pKa = 4.33VEE783 pKa = 4.24VFLVFQTTSKK793 pKa = 10.81GINSNISFNLDD804 pKa = 3.12LSHH807 pKa = 8.99VYY809 pKa = 9.46MDD811 pKa = 3.8RR812 pKa = 11.84KK813 pKa = 10.42KK814 pKa = 10.77DD815 pKa = 3.39VALFNVYY822 pKa = 10.43SIPPKK827 pKa = 10.35KK828 pKa = 10.42DD829 pKa = 2.81ILKK832 pKa = 9.49FWCEE836 pKa = 3.46KK837 pKa = 10.7DD838 pKa = 3.12ITPSSVHH845 pKa = 4.5YY846 pKa = 10.08LYY848 pKa = 10.74RR849 pKa = 11.84EE850 pKa = 3.9SSGDD854 pKa = 3.14CRR856 pKa = 11.84YY857 pKa = 9.09RR858 pKa = 11.84TIRR861 pKa = 11.84GISDD865 pKa = 2.75WGFYY869 pKa = 10.39DD870 pKa = 3.74VEE872 pKa = 4.56EE873 pKa = 4.57ISATVHH879 pKa = 5.84LHH881 pKa = 5.06TGKK884 pKa = 10.51CEE886 pKa = 3.86HH887 pKa = 6.93EE888 pKa = 4.67SFDD891 pKa = 4.15GLCGAIALANTPKK904 pKa = 10.58GIAIIGIHH912 pKa = 5.03MLGRR916 pKa = 11.84EE917 pKa = 4.71DD918 pKa = 2.97IHH920 pKa = 7.99GYY922 pKa = 9.28NVIGRR927 pKa = 11.84AFIEE931 pKa = 4.11RR932 pKa = 11.84SLSNLSQISPILGGINGGSKK952 pKa = 10.47PMLEE956 pKa = 4.2IQDD959 pKa = 3.97KK960 pKa = 10.53EE961 pKa = 3.99ITLVEE966 pKa = 4.02PHH968 pKa = 6.31FKK970 pKa = 10.87SLVRR974 pKa = 11.84YY975 pKa = 9.65LEE977 pKa = 4.26RR978 pKa = 11.84GTLNVYY984 pKa = 8.29GTVAGFHH991 pKa = 6.29PQPKK995 pKa = 8.7TKK997 pKa = 9.22VKK999 pKa = 10.78KK1000 pKa = 10.06MILCDD1005 pKa = 3.71EE1006 pKa = 4.13FLEE1009 pKa = 4.82YY1010 pKa = 11.48YY1011 pKa = 10.22NVPNNYY1017 pKa = 7.32TAPVMKK1023 pKa = 10.2GWEE1026 pKa = 3.87PWHH1029 pKa = 6.55NNFKK1033 pKa = 11.03EE1034 pKa = 4.24MVEE1037 pKa = 4.22VPTTFDD1043 pKa = 3.38RR1044 pKa = 11.84NILRR1048 pKa = 11.84EE1049 pKa = 4.05CAEE1052 pKa = 4.9GYY1054 pKa = 10.66LEE1056 pKa = 5.45DD1057 pKa = 5.65IIVGLPEE1064 pKa = 3.73NWEE1067 pKa = 4.21GEE1069 pKa = 4.49LVFLSNKK1076 pKa = 9.67AAVNGLPGVQYY1087 pKa = 10.69IDD1089 pKa = 4.08GINRR1093 pKa = 11.84KK1094 pKa = 9.61SSMGFPWNKK1103 pKa = 7.64TKK1105 pKa = 10.63KK1106 pKa = 10.41AFLLDD1111 pKa = 4.11SPDD1114 pKa = 3.22EE1115 pKa = 4.41KK1116 pKa = 11.31YY1117 pKa = 10.81PNGVDD1122 pKa = 3.95FPEE1125 pKa = 4.41EE1126 pKa = 3.22FWEE1129 pKa = 4.18RR1130 pKa = 11.84VNKK1133 pKa = 10.31IEE1135 pKa = 4.26DD1136 pKa = 3.67TYY1138 pKa = 11.89KK1139 pKa = 10.05NLEE1142 pKa = 3.75RR1143 pKa = 11.84AFAIFMGHH1151 pKa = 6.97LKK1153 pKa = 10.78DD1154 pKa = 3.6EE1155 pKa = 4.59AVSKK1159 pKa = 10.65EE1160 pKa = 3.47KK1161 pKa = 10.92ARR1163 pKa = 11.84IKK1165 pKa = 9.57KK1166 pKa = 7.69TRR1168 pKa = 11.84LFTGAPSDD1176 pKa = 3.39WAVVVRR1182 pKa = 11.84KK1183 pKa = 9.46HH1184 pKa = 5.83LLSFVRR1190 pKa = 11.84LVQMNKK1196 pKa = 9.08EE1197 pKa = 4.09VFEE1200 pKa = 4.51ACPGAVCQSVEE1211 pKa = 3.64WEE1213 pKa = 4.26LFYY1216 pKa = 11.09QHH1218 pKa = 6.7LTQHH1222 pKa = 6.01GVDD1225 pKa = 3.88RR1226 pKa = 11.84MIAGDD1231 pKa = 3.73FSKK1234 pKa = 10.51FDD1236 pKa = 3.41KK1237 pKa = 10.92RR1238 pKa = 11.84MSPEE1242 pKa = 4.23FILWAFWIIVEE1253 pKa = 4.19IFKK1256 pKa = 10.91KK1257 pKa = 10.56AGFSDD1262 pKa = 4.34EE1263 pKa = 4.16EE1264 pKa = 4.36VKK1266 pKa = 10.67IIWGIAYY1273 pKa = 9.53DD1274 pKa = 3.8IAYY1277 pKa = 8.36PMCIIKK1283 pKa = 10.55GDD1285 pKa = 3.69LVEE1288 pKa = 5.47FFGTNPSGHH1297 pKa = 7.41PLTVIINSMVNSLYY1311 pKa = 9.94IRR1313 pKa = 11.84YY1314 pKa = 9.41AYY1316 pKa = 10.12RR1317 pKa = 11.84CSNPEE1322 pKa = 3.72KK1323 pKa = 9.87TVKK1326 pKa = 9.43TFKK1329 pKa = 11.01KK1330 pKa = 10.21NVALLTYY1337 pKa = 10.8GDD1339 pKa = 4.82DD1340 pKa = 3.44NTMGVSSEE1348 pKa = 4.09IQWFDD1353 pKa = 2.91HH1354 pKa = 6.36TVIQDD1359 pKa = 3.51QLSKK1363 pKa = 10.78IGVKK1367 pKa = 8.86YY1368 pKa = 9.48TMADD1372 pKa = 3.12KK1373 pKa = 10.84DD1374 pKa = 3.89AEE1376 pKa = 4.46SVPFLNIKK1384 pKa = 10.1DD1385 pKa = 3.34ISFLKK1390 pKa = 10.49RR1391 pKa = 11.84KK1392 pKa = 7.97WVWNEE1397 pKa = 3.72EE1398 pKa = 4.26IGHH1401 pKa = 6.2HH1402 pKa = 6.21LAMLDD1407 pKa = 3.36EE1408 pKa = 4.91DD1409 pKa = 5.2SIIKK1413 pKa = 10.38SLTINTPSDD1422 pKa = 3.53SLDD1425 pKa = 3.41EE1426 pKa = 4.44HH1427 pKa = 8.38AHH1429 pKa = 4.65MCAVISSANSEE1440 pKa = 4.19YY1441 pKa = 10.44FFYY1444 pKa = 10.8GRR1446 pKa = 11.84EE1447 pKa = 3.94VHH1449 pKa = 7.04DD1450 pKa = 3.69KK1451 pKa = 10.63RR1452 pKa = 11.84RR1453 pKa = 11.84EE1454 pKa = 3.82KK1455 pKa = 10.49FLEE1458 pKa = 3.73IMEE1461 pKa = 4.19RR1462 pKa = 11.84RR1463 pKa = 11.84PYY1465 pKa = 9.89TFYY1468 pKa = 10.57ATTYY1472 pKa = 10.65SLPSWDD1478 pKa = 3.99EE1479 pKa = 3.61LKK1481 pKa = 10.88DD1482 pKa = 3.67RR1483 pKa = 11.84YY1484 pKa = 10.58LSASVEE1490 pKa = 4.18IEE1492 pKa = 3.57EE1493 pKa = 4.45SRR1495 pKa = 11.84AKK1497 pKa = 10.01RR1498 pKa = 11.84VRR1500 pKa = 11.84GFGRR1504 pKa = 11.84SRR1506 pKa = 11.84TRR1508 pKa = 11.84NN1509 pKa = 3.22

Molecular weight:
172.9 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

2351

842

1509

1175.5

132.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.635 ± 1.129

1.872 ± 0.445

5.274 ± 0.368

5.997 ± 1.68

5.572 ± 0.192

6.423 ± 0.654

2.084 ± 0.234

6.678 ± 0.051

5.997 ± 1.285

7.444 ± 0.242

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.467 ± 0.183

5.487 ± 0.843

4.594 ± 0.614

2.935 ± 0.217

4.551 ± 0.614

7.018 ± 0.072

6.38 ± 1.402

6.976 ± 0.312

1.531 ± 0.191

4.083 ± 0.172

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski