Avian endogenous retrovirus EAV-HP

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; unclassified Retroviridae; Avian retroviruses

Average proteome isoelectric point is 6.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9QME4|Q9QME4_9RETR Capsid protein p27 alternate cleaved 1 OS=Avian endogenous retrovirus EAV-HP OX=93465 GN=gag-env PE=4 SV=1
MM1 pKa = 7.51DD2 pKa = 3.54QVIKK6 pKa = 11.12VLVQFCKK13 pKa = 10.34DD14 pKa = 3.45YY15 pKa = 10.9CGKK18 pKa = 8.77STPSRR23 pKa = 11.84KK24 pKa = 9.64EE25 pKa = 3.29IATVLSLLNEE35 pKa = 4.34LGEE38 pKa = 4.52LDD40 pKa = 3.97SPRR43 pKa = 11.84HH44 pKa = 5.37VLDD47 pKa = 3.25SSRR50 pKa = 11.84WDD52 pKa = 3.88LLTLALCQRR61 pKa = 11.84AMASQKK67 pKa = 9.54ATEE70 pKa = 4.09LKK72 pKa = 9.31TWGLMLGALKK82 pKa = 10.37AARR85 pKa = 11.84AEE87 pKa = 4.28HH88 pKa = 6.62KK89 pKa = 10.4LGAVMSGEE97 pKa = 4.28GAPGSGSLEE106 pKa = 3.99FCRR109 pKa = 11.84TGAQTGAQTTANKK122 pKa = 8.47TATEE126 pKa = 4.03RR127 pKa = 11.84EE128 pKa = 4.02EE129 pKa = 5.11DD130 pKa = 3.81CEE132 pKa = 4.09KK133 pKa = 11.23DD134 pKa = 3.44NEE136 pKa = 4.07EE137 pKa = 4.11SQRR140 pKa = 11.84LGGGATTPTAPPNSIALSPPPPYY163 pKa = 9.75PKK165 pKa = 10.11QPLYY169 pKa = 10.29PSLATTSEE177 pKa = 4.08QGAGPSPKK185 pKa = 10.5GKK187 pKa = 10.94GEE189 pKa = 4.02GRR191 pKa = 11.84LKK193 pKa = 10.24LTDD196 pKa = 2.76WGQIKK201 pKa = 10.65EE202 pKa = 4.13EE203 pKa = 4.17VAQKK207 pKa = 11.0GLAATYY213 pKa = 7.06TLPVVVSEE221 pKa = 4.24EE222 pKa = 4.35GGPIWVPLDD231 pKa = 3.54PKK233 pKa = 10.85GVARR237 pKa = 11.84MIEE240 pKa = 4.0AVEE243 pKa = 4.08KK244 pKa = 10.71KK245 pKa = 10.36GLKK248 pKa = 10.22SPLTMNALEE257 pKa = 4.76ALTASGPMLPYY268 pKa = 10.42DD269 pKa = 3.86IEE271 pKa = 4.29NLMRR275 pKa = 11.84MVLKK279 pKa = 10.25PVQYY283 pKa = 9.46TLWRR287 pKa = 11.84EE288 pKa = 3.65EE289 pKa = 3.6WHH291 pKa = 6.43TKK293 pKa = 8.73LKK295 pKa = 10.82QMLITAQGDD304 pKa = 3.58QRR306 pKa = 11.84NPIYY310 pKa = 10.84GSDD313 pKa = 3.3IQRR316 pKa = 11.84LTGNAPGLLTPQAQVCQLRR335 pKa = 11.84PGEE338 pKa = 4.67LIATTDD344 pKa = 3.33AAIDD348 pKa = 3.71AFRR351 pKa = 11.84KK352 pKa = 8.98LARR355 pKa = 11.84SAEE358 pKa = 4.19PTTPWTEE365 pKa = 3.59IAQGPTEE372 pKa = 4.35PFQEE376 pKa = 4.38FADD379 pKa = 4.09RR380 pKa = 11.84LIKK383 pKa = 10.51AVEE386 pKa = 4.38GSDD389 pKa = 4.14LPRR392 pKa = 11.84AVHH395 pKa = 6.35GPVILDD401 pKa = 3.4CLYY404 pKa = 9.95QKK406 pKa = 10.71SSEE409 pKa = 4.17GVQGILRR416 pKa = 11.84AAPGRR421 pKa = 11.84LQTPGEE427 pKa = 4.23AIKK430 pKa = 11.04YY431 pKa = 10.03VLDD434 pKa = 3.71KK435 pKa = 11.27QKK437 pKa = 10.93ACPSVAGEE445 pKa = 3.93VAAAVAGVMMACRR458 pKa = 11.84EE459 pKa = 4.0ADD461 pKa = 3.27HH462 pKa = 7.13RR463 pKa = 11.84SADD466 pKa = 4.1RR467 pKa = 11.84QLGPCFKK474 pKa = 10.3CGQLGHH480 pKa = 6.79IRR482 pKa = 11.84AQCRR486 pKa = 11.84MGTGGGVTCQQCGRR500 pKa = 11.84KK501 pKa = 8.99GHH503 pKa = 6.97AAPQCRR509 pKa = 11.84ARR511 pKa = 11.84RR512 pKa = 11.84PPSQGNNNGRR522 pKa = 11.84QSEE525 pKa = 4.18HH526 pKa = 7.21GDD528 pKa = 3.2IIFRR532 pKa = 11.84PMQAPDD538 pKa = 3.72LSLPMAALSLSTHH551 pKa = 5.67EE552 pKa = 4.5RR553 pKa = 11.84PLVKK557 pKa = 9.99ATISCTNLPPDD568 pKa = 3.61FQGPLSIFVTALIDD582 pKa = 3.44SGADD586 pKa = 3.12VTVVTEE592 pKa = 4.3TEE594 pKa = 4.52WPSSWPAEE602 pKa = 3.89ASQSIMGVGGATPSRR617 pKa = 11.84RR618 pKa = 11.84STNEE622 pKa = 3.19VQAVVINRR630 pKa = 11.84DD631 pKa = 3.11GSLEE635 pKa = 4.02KK636 pKa = 10.12PALLTPLVARR646 pKa = 11.84VPGTLLGRR654 pKa = 11.84DD655 pKa = 4.22FLRR658 pKa = 11.84QIGIPQYY665 pKa = 10.52PLNTFKK671 pKa = 11.1GYY673 pKa = 7.79VTNVTACDD681 pKa = 3.5NDD683 pKa = 3.86ADD685 pKa = 4.53LASQTACLIKK695 pKa = 10.62ALNTTLPWDD704 pKa = 3.93PQEE707 pKa = 4.98LDD709 pKa = 3.12ILGSQMIKK717 pKa = 10.63NGTTRR722 pKa = 11.84TCVTFGSVCYY732 pKa = 10.26KK733 pKa = 10.13EE734 pKa = 4.11NNRR737 pKa = 11.84SIVCHH742 pKa = 6.12NFDD745 pKa = 4.45GNFNGTGGAEE755 pKa = 3.76AEE757 pKa = 4.33LRR759 pKa = 11.84DD760 pKa = 6.41FIAKK764 pKa = 8.57WKK766 pKa = 10.76SDD768 pKa = 3.59DD769 pKa = 3.89LLIRR773 pKa = 11.84PYY775 pKa = 11.07VNQSWTMVSPINVEE789 pKa = 3.83SFSISRR795 pKa = 11.84RR796 pKa = 11.84YY797 pKa = 10.25CGFTSNEE804 pKa = 3.27TRR806 pKa = 11.84YY807 pKa = 10.51YY808 pKa = 10.69RR809 pKa = 11.84GDD811 pKa = 3.31LSNWCGSKK819 pKa = 9.95RR820 pKa = 11.84GKK822 pKa = 9.29WSAGYY827 pKa = 10.99SNGTKK832 pKa = 10.19CSSNTTGCGGNCTTEE847 pKa = 3.69WNYY850 pKa = 10.65YY851 pKa = 10.67AYY853 pKa = 10.44GFTFGKK859 pKa = 9.87QPEE862 pKa = 4.4VLWNNGTAKK871 pKa = 10.58ALPPGIFLICGDD883 pKa = 4.57RR884 pKa = 11.84AWQGIPRR891 pKa = 11.84NALGGPCYY899 pKa = 10.2LGQLTMLSPNFTTWIAYY916 pKa = 8.26GPNITGHH923 pKa = 5.28RR924 pKa = 11.84RR925 pKa = 11.84SRR927 pKa = 11.84RR928 pKa = 11.84SLSRR932 pKa = 11.84LSPDD936 pKa = 4.72CGDD939 pKa = 4.47EE940 pKa = 4.06LQLWSVTARR949 pKa = 11.84IFASFFAPGIAAAQALKK966 pKa = 10.36EE967 pKa = 4.11IEE969 pKa = 5.45RR970 pKa = 11.84LACWSVKK977 pKa = 8.36QANLTSLILNAMLEE991 pKa = 4.4DD992 pKa = 3.82TSSIRR997 pKa = 11.84HH998 pKa = 5.44AVLQNRR1004 pKa = 11.84AAIDD1008 pKa = 3.91FLLLAQGHH1016 pKa = 6.17GCQDD1020 pKa = 3.53VEE1022 pKa = 5.43GMCCFNLSDD1031 pKa = 3.82HH1032 pKa = 6.85SEE1034 pKa = 4.49SIHH1037 pKa = 7.06KK1038 pKa = 10.12ALQAMKK1044 pKa = 10.24EE1045 pKa = 4.04HH1046 pKa = 6.28TEE1048 pKa = 4.11KK1049 pKa = 10.53IRR1051 pKa = 11.84VEE1053 pKa = 4.3DD1054 pKa = 4.65DD1055 pKa = 4.63PIGDD1059 pKa = 3.23WFTRR1063 pKa = 11.84TFGDD1067 pKa = 4.18LGRR1070 pKa = 11.84WLAKK1074 pKa = 9.76GVKK1077 pKa = 8.43TLLFALLVIACLLAIIPCLIKK1098 pKa = 10.73CFQDD1102 pKa = 3.33CLLRR1106 pKa = 11.84TMNQFMDD1113 pKa = 3.64EE1114 pKa = 4.21RR1115 pKa = 11.84IKK1117 pKa = 9.6YY1118 pKa = 9.58HH1119 pKa = 7.53RR1120 pKa = 11.84IRR1122 pKa = 11.84EE1123 pKa = 4.1QLL1125 pKa = 3.3

Molecular weight: 122.62 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9QME4|Q9QME4_9RETR Capsid protein p27 alternate cleaved 1 OS=Avian endogenous retrovirus EAV-HP OX=93465 GN=gag-env PE=4 SV=1
MM1 pKa = 7.51DD2 pKa = 3.54QVIKK6 pKa = 11.12VLVQFCKK13 pKa = 10.34DD14 pKa = 3.45YY15 pKa = 10.9CGKK18 pKa = 8.77STPSRR23 pKa = 11.84KK24 pKa = 9.64EE25 pKa = 3.29IATVLSLLNEE35 pKa = 4.34LGEE38 pKa = 4.52LDD40 pKa = 3.97SPRR43 pKa = 11.84HH44 pKa = 5.37VLDD47 pKa = 3.25SSRR50 pKa = 11.84WDD52 pKa = 3.88LLTLALCQRR61 pKa = 11.84AMASQKK67 pKa = 9.54ATEE70 pKa = 4.09LKK72 pKa = 9.31TWGLMLGALKK82 pKa = 10.37AARR85 pKa = 11.84AEE87 pKa = 4.28HH88 pKa = 6.62KK89 pKa = 10.4LGAVMSGEE97 pKa = 4.28GAPGSGSLEE106 pKa = 3.99FCRR109 pKa = 11.84TGAQTGAQTTANKK122 pKa = 8.47TATEE126 pKa = 4.03RR127 pKa = 11.84EE128 pKa = 4.02EE129 pKa = 5.11DD130 pKa = 3.81CEE132 pKa = 4.09KK133 pKa = 11.23DD134 pKa = 3.44NEE136 pKa = 4.07EE137 pKa = 4.11SQRR140 pKa = 11.84LGGGATTPTAPPNSIALSPPPPYY163 pKa = 9.75PKK165 pKa = 10.11QPLYY169 pKa = 10.29PSLATTSEE177 pKa = 4.08QGAGPSPKK185 pKa = 10.5GKK187 pKa = 10.94GEE189 pKa = 4.02GRR191 pKa = 11.84LKK193 pKa = 10.24LTDD196 pKa = 2.76WGQIKK201 pKa = 10.65EE202 pKa = 4.13EE203 pKa = 4.17VAQKK207 pKa = 11.0GLAATYY213 pKa = 7.06TLPVVVSEE221 pKa = 4.24EE222 pKa = 4.35GGPIWVPLDD231 pKa = 3.54PKK233 pKa = 10.85GVARR237 pKa = 11.84MIEE240 pKa = 4.0AVEE243 pKa = 4.08KK244 pKa = 10.71KK245 pKa = 10.36GLKK248 pKa = 10.22SPLTMNALEE257 pKa = 4.76ALTASGPMLPYY268 pKa = 10.42DD269 pKa = 3.86IEE271 pKa = 4.29NLMRR275 pKa = 11.84MVLKK279 pKa = 10.25PVQYY283 pKa = 9.46TLWRR287 pKa = 11.84EE288 pKa = 3.65EE289 pKa = 3.6WHH291 pKa = 6.43TKK293 pKa = 8.73LKK295 pKa = 10.82QMLITAQGDD304 pKa = 3.58QRR306 pKa = 11.84NPIYY310 pKa = 10.84GSDD313 pKa = 3.3IQRR316 pKa = 11.84LTGNAPGLLTPQAQVCQLRR335 pKa = 11.84PGEE338 pKa = 4.67LIATTDD344 pKa = 3.33AAIDD348 pKa = 3.71AFRR351 pKa = 11.84KK352 pKa = 8.98LARR355 pKa = 11.84SAEE358 pKa = 4.19PTTPWTEE365 pKa = 3.59IAQGPTEE372 pKa = 4.35PFQEE376 pKa = 4.38FADD379 pKa = 4.09RR380 pKa = 11.84LIKK383 pKa = 10.51AVEE386 pKa = 4.38GSDD389 pKa = 4.14LPRR392 pKa = 11.84AVHH395 pKa = 6.35GPVILDD401 pKa = 3.4CLYY404 pKa = 9.95QKK406 pKa = 10.71SSEE409 pKa = 4.17GVQGILRR416 pKa = 11.84AAPGRR421 pKa = 11.84LQTPGEE427 pKa = 4.23AIKK430 pKa = 11.04YY431 pKa = 10.03VLDD434 pKa = 3.71KK435 pKa = 11.27QKK437 pKa = 10.93ACPSVAGEE445 pKa = 3.93VAAAVAGVMMACRR458 pKa = 11.84EE459 pKa = 4.0ADD461 pKa = 3.27HH462 pKa = 7.13RR463 pKa = 11.84SADD466 pKa = 4.1RR467 pKa = 11.84QLGPCFKK474 pKa = 10.3CGQLGHH480 pKa = 6.79IRR482 pKa = 11.84AQCRR486 pKa = 11.84MGTGGGVTCQQCGRR500 pKa = 11.84KK501 pKa = 8.99GHH503 pKa = 6.97AAPQCRR509 pKa = 11.84ARR511 pKa = 11.84RR512 pKa = 11.84PPSQGNNNGRR522 pKa = 11.84QSEE525 pKa = 4.18HH526 pKa = 7.21GDD528 pKa = 3.2IIFRR532 pKa = 11.84PMQAPDD538 pKa = 3.72LSLPMAALSLSTHH551 pKa = 5.67EE552 pKa = 4.5RR553 pKa = 11.84PLVKK557 pKa = 9.99ATISCTNLPPDD568 pKa = 3.61FQGPLSIFVTALIDD582 pKa = 3.44SGADD586 pKa = 3.12VTVVTEE592 pKa = 4.3TEE594 pKa = 4.52WPSSWPAEE602 pKa = 3.89ASQSIMGVGGATPSRR617 pKa = 11.84RR618 pKa = 11.84STNEE622 pKa = 3.19VQAVVINRR630 pKa = 11.84DD631 pKa = 3.11GSLEE635 pKa = 4.02KK636 pKa = 10.12PALLTPLVARR646 pKa = 11.84VPGTLLGRR654 pKa = 11.84DD655 pKa = 4.22FLRR658 pKa = 11.84QIGIPQYY665 pKa = 10.52PLNTFKK671 pKa = 11.1GYY673 pKa = 7.79VTNVTACDD681 pKa = 3.5NDD683 pKa = 3.86ADD685 pKa = 4.53LASQTACLIKK695 pKa = 10.62ALNTTLPWDD704 pKa = 3.93PQEE707 pKa = 4.98LDD709 pKa = 3.12ILGSQMIKK717 pKa = 10.63NGTTRR722 pKa = 11.84TCVTFGSVCYY732 pKa = 10.26KK733 pKa = 10.13EE734 pKa = 4.11NNRR737 pKa = 11.84SIVCHH742 pKa = 6.12NFDD745 pKa = 4.45GNFNGTGGAEE755 pKa = 3.76AEE757 pKa = 4.33LRR759 pKa = 11.84DD760 pKa = 6.41FIAKK764 pKa = 8.57WKK766 pKa = 10.76SDD768 pKa = 3.59DD769 pKa = 3.89LLIRR773 pKa = 11.84PYY775 pKa = 11.07VNQSWTMVSPINVEE789 pKa = 3.83SFSISRR795 pKa = 11.84RR796 pKa = 11.84YY797 pKa = 10.25CGFTSNEE804 pKa = 3.27TRR806 pKa = 11.84YY807 pKa = 10.51YY808 pKa = 10.69RR809 pKa = 11.84GDD811 pKa = 3.31LSNWCGSKK819 pKa = 9.95RR820 pKa = 11.84GKK822 pKa = 9.29WSAGYY827 pKa = 10.99SNGTKK832 pKa = 10.19CSSNTTGCGGNCTTEE847 pKa = 3.69WNYY850 pKa = 10.65YY851 pKa = 10.67AYY853 pKa = 10.44GFTFGKK859 pKa = 9.87QPEE862 pKa = 4.4VLWNNGTAKK871 pKa = 10.58ALPPGIFLICGDD883 pKa = 4.57RR884 pKa = 11.84AWQGIPRR891 pKa = 11.84NALGGPCYY899 pKa = 10.2LGQLTMLSPNFTTWIAYY916 pKa = 8.26GPNITGHH923 pKa = 5.28RR924 pKa = 11.84RR925 pKa = 11.84SRR927 pKa = 11.84RR928 pKa = 11.84SLSRR932 pKa = 11.84LSPDD936 pKa = 4.72CGDD939 pKa = 4.47EE940 pKa = 4.06LQLWSVTARR949 pKa = 11.84IFASFFAPGIAAAQALKK966 pKa = 10.36EE967 pKa = 4.11IEE969 pKa = 5.45RR970 pKa = 11.84LACWSVKK977 pKa = 8.36QANLTSLILNAMLEE991 pKa = 4.4DD992 pKa = 3.82TSSIRR997 pKa = 11.84HH998 pKa = 5.44AVLQNRR1004 pKa = 11.84AAIDD1008 pKa = 3.91FLLLAQGHH1016 pKa = 6.17GCQDD1020 pKa = 3.53VEE1022 pKa = 5.43GMCCFNLSDD1031 pKa = 3.82HH1032 pKa = 6.85SEE1034 pKa = 4.49SIHH1037 pKa = 7.06KK1038 pKa = 10.12ALQAMKK1044 pKa = 10.24EE1045 pKa = 4.04HH1046 pKa = 6.28TEE1048 pKa = 4.11KK1049 pKa = 10.53IRR1051 pKa = 11.84VEE1053 pKa = 4.3DD1054 pKa = 4.65DD1055 pKa = 4.63PIGDD1059 pKa = 3.23WFTRR1063 pKa = 11.84TFGDD1067 pKa = 4.18LGRR1070 pKa = 11.84WLAKK1074 pKa = 9.76GVKK1077 pKa = 8.43TLLFALLVIACLLAIIPCLIKK1098 pKa = 10.73CFQDD1102 pKa = 3.33CLLRR1106 pKa = 11.84TMNQFMDD1113 pKa = 3.64EE1114 pKa = 4.21RR1115 pKa = 11.84IKK1117 pKa = 9.6YY1118 pKa = 9.58HH1119 pKa = 7.53RR1120 pKa = 11.84IRR1122 pKa = 11.84EE1123 pKa = 4.1QLL1125 pKa = 3.3

Molecular weight: 122.62 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

1125

1125

1125

1125.0

122.62

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.244 ± 0.0

3.289 ± 0.0

4.444 ± 0.0

5.422 ± 0.0

2.756 ± 0.0

8.711 ± 0.0

1.511 ± 0.0

4.889 ± 0.0

4.711 ± 0.0

9.956 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.133 ± 0.0

3.733 ± 0.0

6.222 ± 0.0

4.978 ± 0.0

5.867 ± 0.0

6.4 ± 0.0

7.022 ± 0.0

4.711 ± 0.0

1.956 ± 0.0

2.044 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski