Oceanotoga teriensis

Taxonomy: cellular organisms; Bacteria; Thermotogae; Thermotogae; Petrotogales; Petrotogaceae; Oceanotoga

Average proteome isoelectric point is 6.77

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2638 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A316D2T6|A0A316D2T6_9BACT Putative MATE family efflux protein OS=Oceanotoga teriensis OX=515440 GN=C7380_10770 PE=4 SV=1
MM1 pKa = 7.58SKK3 pKa = 10.72RR4 pKa = 11.84LTVLLFIIFTFILSFGSSYY23 pKa = 11.06TMNSFDD29 pKa = 3.81SSEE32 pKa = 4.09LNRR35 pKa = 11.84INSAMSTDD43 pKa = 3.41KK44 pKa = 11.57GNFSLNVAKK53 pKa = 10.62VIYY56 pKa = 10.21DD57 pKa = 3.63FYY59 pKa = 11.5NFDD62 pKa = 3.61WAGNEE67 pKa = 3.7YY68 pKa = 10.8LLRR71 pKa = 11.84DD72 pKa = 4.24LEE74 pKa = 5.72DD75 pKa = 3.16IMNLYY80 pKa = 10.62SEE82 pKa = 5.93DD83 pKa = 3.73IYY85 pKa = 11.66SEE87 pKa = 4.9DD88 pKa = 3.93FDD90 pKa = 6.24SEE92 pKa = 4.51FDD94 pKa = 4.46DD95 pKa = 4.29EE96 pKa = 6.17DD97 pKa = 4.02YY98 pKa = 11.52LEE100 pKa = 4.27KK101 pKa = 11.01LEE103 pKa = 5.12EE104 pKa = 4.14FFKK107 pKa = 10.97SLKK110 pKa = 10.8SSDD113 pKa = 4.12VYY115 pKa = 11.84DD116 pKa = 4.07LMVSIKK122 pKa = 10.9DD123 pKa = 3.55EE124 pKa = 4.86LKK126 pKa = 11.18DD127 pKa = 3.52LDD129 pKa = 4.26EE130 pKa = 5.22NKK132 pKa = 10.6DD133 pKa = 3.64SLVFLSKK140 pKa = 10.31EE141 pKa = 4.01AYY143 pKa = 9.94DD144 pKa = 4.76DD145 pKa = 3.78FVKK148 pKa = 10.89FINVDD153 pKa = 3.08SDD155 pKa = 3.97PYY157 pKa = 10.58FVEE160 pKa = 4.5FDD162 pKa = 3.84YY163 pKa = 10.1EE164 pKa = 4.63TVGNFAFDD172 pKa = 3.56YY173 pKa = 7.9RR174 pKa = 11.84TLKK177 pKa = 10.66ILDD180 pKa = 3.32ILANTFVYY188 pKa = 10.5MNDD191 pKa = 3.45NPSMLEE197 pKa = 3.83YY198 pKa = 10.15YY199 pKa = 10.76HH200 pKa = 6.74NFFSYY205 pKa = 10.76FEE207 pKa = 4.44SDD209 pKa = 3.36PDD211 pKa = 3.71EE212 pKa = 4.62EE213 pKa = 4.73DD214 pKa = 4.48LIRR217 pKa = 11.84PEE219 pKa = 4.2ANSVFSQMEE228 pKa = 4.07YY229 pKa = 10.9VEE231 pKa = 5.02PEE233 pKa = 4.04DD234 pKa = 5.65FEE236 pKa = 4.92PLLKK240 pKa = 10.6KK241 pKa = 10.48LAAVDD246 pKa = 5.07GDD248 pKa = 4.45SEE250 pKa = 4.64WISLRR255 pKa = 11.84DD256 pKa = 3.33IFIPEE261 pKa = 4.06ILILPPSYY269 pKa = 10.92EE270 pKa = 3.98YY271 pKa = 9.84FTISDD276 pKa = 3.59YY277 pKa = 11.96AMRR280 pKa = 11.84GMLLIDD286 pKa = 4.62DD287 pKa = 5.45FEE289 pKa = 4.77TSDD292 pKa = 3.58LFVNKK297 pKa = 9.78RR298 pKa = 11.84YY299 pKa = 10.37ADD301 pKa = 3.62LVDD304 pKa = 3.91YY305 pKa = 10.3FMNTSEE311 pKa = 5.21ADD313 pKa = 3.51DD314 pKa = 3.77FVYY317 pKa = 10.79YY318 pKa = 9.41YY319 pKa = 11.04YY320 pKa = 9.94PDD322 pKa = 3.29SYY324 pKa = 11.24GIKK327 pKa = 10.05EE328 pKa = 4.61DD329 pKa = 3.39FDD331 pKa = 4.25KK332 pKa = 11.34VLKK335 pKa = 10.32EE336 pKa = 4.13NYY338 pKa = 9.02NFRR341 pKa = 11.84YY342 pKa = 10.14ANPILGFLNVSFDD355 pKa = 3.77EE356 pKa = 4.73FLMEE360 pKa = 5.33EE361 pKa = 4.19DD362 pKa = 4.52LEE364 pKa = 5.43DD365 pKa = 3.53IVSEE369 pKa = 4.2FWMSINGVKK378 pKa = 10.26VYY380 pKa = 10.74NFRR383 pKa = 11.84DD384 pKa = 3.96FVEE387 pKa = 4.52EE388 pKa = 3.87FLNSYY393 pKa = 9.93KK394 pKa = 10.98DD395 pKa = 3.44VMNFKK400 pKa = 10.52FRR402 pKa = 11.84MMFNIDD408 pKa = 3.12MSTGYY413 pKa = 9.88EE414 pKa = 4.0EE415 pKa = 4.54PGEE418 pKa = 4.16VVEE421 pKa = 4.6PLVLGLDD428 pKa = 3.52MNMTFNYY435 pKa = 8.81PAYY438 pKa = 9.51KK439 pKa = 10.64DD440 pKa = 3.83PFDD443 pKa = 3.82VGAMNLRR450 pKa = 11.84FKK452 pKa = 11.11PEE454 pKa = 3.41IFNVVMSEE462 pKa = 4.04FAKK465 pKa = 10.87LEE467 pKa = 3.67QGYY470 pKa = 9.88FNISEE475 pKa = 4.13IVSNISEE482 pKa = 4.19YY483 pKa = 10.78TDD485 pKa = 3.61FLKK488 pKa = 11.09VEE490 pKa = 4.14NNDD493 pKa = 3.22LVFYY497 pKa = 10.73LNVDD501 pKa = 3.48NYY503 pKa = 10.17FDD505 pKa = 4.48SEE507 pKa = 4.11ISFVNFMSDD516 pKa = 4.36DD517 pKa = 3.58IVNLLSMFLMTAMSSDD533 pKa = 3.55YY534 pKa = 11.31NYY536 pKa = 11.59

Molecular weight: 63.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A316D0Q2|A0A316D0Q2_9BACT 3D (Asp-Asp-Asp) domain-containing protein OS=Oceanotoga teriensis OX=515440 GN=C7380_10290 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 9.91QPSRR9 pKa = 11.84IKK11 pKa = 10.52RR12 pKa = 11.84KK13 pKa = 7.89RR14 pKa = 11.84THH16 pKa = 6.05GFLVRR21 pKa = 11.84KK22 pKa = 7.06RR23 pKa = 11.84TKK25 pKa = 10.3AGSSVLRR32 pKa = 11.84RR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.65GRR39 pKa = 11.84KK40 pKa = 8.66RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight: 5.29 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2638

0

2638

858968

26

1762

325.6

37.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.394 ± 0.047

0.641 ± 0.014

5.608 ± 0.037

7.409 ± 0.051

5.524 ± 0.045

5.579 ± 0.048

1.243 ± 0.018

11.443 ± 0.062

10.147 ± 0.062

9.038 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.532 ± 0.021

7.348 ± 0.056

2.805 ± 0.024

2.15 ± 0.025

2.768 ± 0.027

6.512 ± 0.038

4.439 ± 0.032

5.044 ± 0.042

0.754 ± 0.015

4.622 ± 0.036
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski