Equus caballus papillomavirus 4

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Dyoiotapapillomavirus; Dyoiotapapillomavirus 2

Average proteome isoelectric point is 6.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|K9M9L3|K9M9L3_9PAPI Replication protein E1 OS=Equus caballus papillomavirus 4 OX=1235428 GN=E1 PE=3 SV=1
MM1 pKa = 7.49EE2 pKa = 5.26AQPPLKK8 pKa = 9.7RR9 pKa = 11.84RR10 pKa = 11.84KK11 pKa = 9.12RR12 pKa = 11.84ASVEE16 pKa = 3.41NLYY19 pKa = 10.55RR20 pKa = 11.84SCKK23 pKa = 10.44LGGDD27 pKa = 4.01CPADD31 pKa = 3.24VVPKK35 pKa = 10.92VEE37 pKa = 4.48GDD39 pKa = 3.6TPADD43 pKa = 5.26RR44 pKa = 11.84ILKK47 pKa = 8.66WLSSFLFFGNLGISSTGRR65 pKa = 11.84GVGGFRR71 pKa = 11.84PLGGGAHH78 pKa = 6.3AAEE81 pKa = 5.02GGSVRR86 pKa = 11.84VGTPISTVEE95 pKa = 3.9VGSAVDD101 pKa = 3.55SVGPLEE107 pKa = 4.49LAPIDD112 pKa = 4.07GVTPTSPAVVSMGEE126 pKa = 4.32GVGEE130 pKa = 4.06AVDD133 pKa = 3.74VFAEE137 pKa = 4.22VTPPVGGATIGSEE150 pKa = 4.25VNSAGVGEE158 pKa = 4.11PAILDD163 pKa = 3.4VSAEE167 pKa = 4.2VVPKK171 pKa = 10.42LRR173 pKa = 11.84AAVTSTEE180 pKa = 3.77FHH182 pKa = 6.19NPAFQVEE189 pKa = 4.57FRR191 pKa = 11.84SVGTGEE197 pKa = 4.24TSGSEE202 pKa = 3.52QAYY205 pKa = 8.01WFGHH209 pKa = 5.93AGGHH213 pKa = 5.53AVGEE217 pKa = 4.22AGEE220 pKa = 4.48SIEE223 pKa = 5.84LVDD226 pKa = 5.09LNYY229 pKa = 10.53RR230 pKa = 11.84GPKK233 pKa = 9.02TSTPSAEE240 pKa = 4.37VVSEE244 pKa = 3.52PRR246 pKa = 11.84LWGRR250 pKa = 11.84RR251 pKa = 11.84FQQVRR256 pKa = 11.84VQQPEE261 pKa = 4.5FVTAPQTLVEE271 pKa = 4.94FGFSNPAYY279 pKa = 10.08DD280 pKa = 4.18PEE282 pKa = 6.22GSLLFTYY289 pKa = 10.72NEE291 pKa = 4.41SAPSAAPSSPFQDD304 pKa = 2.45IAYY307 pKa = 9.85LGRR310 pKa = 11.84PEE312 pKa = 3.38ITARR316 pKa = 11.84AGRR319 pKa = 11.84VGVSRR324 pKa = 11.84YY325 pKa = 8.26GRR327 pKa = 11.84RR328 pKa = 11.84ATLHH332 pKa = 5.37TRR334 pKa = 11.84AGTILGGEE342 pKa = 3.88VHH344 pKa = 6.39FRR346 pKa = 11.84YY347 pKa = 10.13DD348 pKa = 3.62FSSIEE353 pKa = 4.11PEE355 pKa = 4.03TLEE358 pKa = 5.51LSDD361 pKa = 5.0LTVQDD366 pKa = 3.86STSLAGLSSVDD377 pKa = 3.81LGSEE381 pKa = 3.97GMSINEE387 pKa = 3.78SWLGEE392 pKa = 3.98DD393 pKa = 3.86EE394 pKa = 4.18QVSFHH399 pKa = 6.28GVLAFSEE406 pKa = 4.72GSEE409 pKa = 4.38AEE411 pKa = 3.81IAPYY415 pKa = 9.29PRR417 pKa = 11.84SVWVRR422 pKa = 11.84LAGEE426 pKa = 4.48GSSFSFWGGEE436 pKa = 3.99NLPGRR441 pKa = 11.84AVFITSLPSPSATPPTSTDD460 pKa = 2.98TAGFSMLDD468 pKa = 3.19PSLLKK473 pKa = 9.83RR474 pKa = 11.84CRR476 pKa = 11.84RR477 pKa = 11.84KK478 pKa = 9.99RR479 pKa = 11.84RR480 pKa = 11.84SCFADD485 pKa = 4.58GIVDD489 pKa = 3.89ARR491 pKa = 11.84QSEE494 pKa = 4.94VLSAPCSCDD503 pKa = 3.8KK504 pKa = 10.78GAQYY508 pKa = 11.55

Molecular weight: 53.51 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|K9M9S8|K9M9S8_9PAPI E4 OS=Equus caballus papillomavirus 4 OX=1235428 PE=4 SV=1
MM1 pKa = 7.69KK2 pKa = 9.39LTSTLLLAAPPTEE15 pKa = 4.38TPRR18 pKa = 11.84TPQTEE23 pKa = 4.37LQGGPPPPLDD33 pKa = 4.17LQPGPQSPAVQLPEE47 pKa = 3.96TLQQFLRR54 pKa = 11.84NSHH57 pKa = 5.36IWGGDD62 pKa = 2.97VWPRR66 pKa = 11.84RR67 pKa = 11.84GGGYY71 pKa = 7.9TRR73 pKa = 11.84QQGTSLLSTQAACLGHH89 pKa = 6.58SGAPPCKK96 pKa = 9.47PGLDD100 pKa = 3.69GGASGEE106 pKa = 4.37WNLPPPPAALRR117 pKa = 11.84ARR119 pKa = 11.84LRR121 pKa = 11.84QTRR124 pKa = 11.84LRR126 pKa = 11.84NRR128 pKa = 11.84RR129 pKa = 11.84RR130 pKa = 11.84LRR132 pKa = 11.84RR133 pKa = 11.84CLEE136 pKa = 3.96LLRR139 pKa = 11.84ADD141 pKa = 4.24LEE143 pKa = 4.22EE144 pKa = 3.91LRR146 pKa = 11.84FWVTVGLLL154 pKa = 3.32

Molecular weight: 16.87 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

2425

85

626

346.4

38.16

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.742 ± 0.605

2.227 ± 0.667

4.742 ± 0.4

6.103 ± 0.499

4.371 ± 0.605

8.619 ± 1.133

1.979 ± 0.271

2.598 ± 0.369

3.629 ± 0.684

8.784 ± 0.827

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.567 ± 0.259

3.216 ± 0.777

7.216 ± 1.009

4.206 ± 0.514

7.258 ± 0.607

7.67 ± 1.028

5.773 ± 0.334

6.515 ± 0.797

1.856 ± 0.232

2.928 ± 0.621
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski