Klebsiella virus 0507KN21

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Ackermannviridae; Taipeivirus

Average proteome isoelectric point is 5.95

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 154 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S6CGH1|S6CGH1_9CAUD Baseplate wedge subunit OS=Klebsiella virus 0507KN21 OX=2169687 PE=4 SV=1
MM1 pKa = 7.68KK2 pKa = 10.23LNKK5 pKa = 9.49ILLVCALAFSTTACSTLLDD24 pKa = 4.01VPDD27 pKa = 4.4LSGPDD32 pKa = 3.58FTQDD36 pKa = 3.04QAQTKK41 pKa = 8.7MDD43 pKa = 4.05DD44 pKa = 3.43MVKK47 pKa = 10.46AHH49 pKa = 7.14AALQGTTPGPIQTVCNYY66 pKa = 10.46DD67 pKa = 3.73DD68 pKa = 4.68SDD70 pKa = 3.91PTTEE74 pKa = 5.24LYY76 pKa = 10.56HH77 pKa = 6.97CSTFVKK83 pKa = 10.55DD84 pKa = 4.05SMVVLYY90 pKa = 10.14GDD92 pKa = 4.43CQADD96 pKa = 3.94GCKK99 pKa = 9.49ATGYY103 pKa = 11.13DD104 pKa = 4.02KK105 pKa = 11.61VEE107 pKa = 3.94EE108 pKa = 4.53DD109 pKa = 3.61KK110 pKa = 11.58

Molecular weight: 11.91 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S6CLQ2|S6CLQ2_9CAUD Uncharacterized protein OS=Klebsiella virus 0507KN21 OX=2169687 PE=4 SV=1
MM1 pKa = 7.66LGQNEE6 pKa = 4.26HH7 pKa = 6.64VIGFTRR13 pKa = 11.84PTWWSGFWVYY23 pKa = 9.63FWVAVFLVPTFGISLFFLIPTVIRR47 pKa = 11.84NLTTEE52 pKa = 4.07FAVTNKK58 pKa = 10.01RR59 pKa = 11.84VIFKK63 pKa = 9.78TGFIRR68 pKa = 11.84RR69 pKa = 11.84DD70 pKa = 3.26ADD72 pKa = 3.45EE73 pKa = 4.56LRR75 pKa = 11.84LGKK78 pKa = 10.36VEE80 pKa = 4.17TVKK83 pKa = 10.36VDD85 pKa = 3.01QSITGRR91 pKa = 11.84VLRR94 pKa = 11.84FSTISVIGTGGTRR107 pKa = 11.84LVAKK111 pKa = 10.44GCAKK115 pKa = 10.68GNDD118 pKa = 3.86FRR120 pKa = 11.84RR121 pKa = 11.84VIYY124 pKa = 10.25DD125 pKa = 3.17QLDD128 pKa = 3.3NN129 pKa = 4.17

Molecular weight: 14.71 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

154

0

154

45547

100

1616

295.8

33.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.811 ± 0.182

1.085 ± 0.065

6.6 ± 0.134

6.424 ± 0.208

4.365 ± 0.12

6.795 ± 0.236

1.82 ± 0.114

6.233 ± 0.141

6.227 ± 0.188

7.902 ± 0.161

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.845 ± 0.103

5.247 ± 0.121

3.93 ± 0.111

3.798 ± 0.114

4.821 ± 0.132

6.413 ± 0.19

6.0 ± 0.229

7.129 ± 0.128

1.489 ± 0.067

4.066 ± 0.125
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski