Lactococcus insecticola

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1846 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6A0B7T7|A0A6A0B7T7_9LACT 2 5-diketo-D-gluconic acid reductase OS=Lactococcus insecticola OX=2709158 GN=Hs20B_08120 PE=4 SV=1
MM1 pKa = 7.16NVNVYY6 pKa = 10.52EE7 pKa = 4.31MIKK10 pKa = 10.43DD11 pKa = 3.5DD12 pKa = 3.97KK13 pKa = 10.94FFIGSYY19 pKa = 9.35PNNFAVGRR27 pKa = 11.84WFTVEE32 pKa = 3.89EE33 pKa = 4.25LASKK37 pKa = 10.13DD38 pKa = 2.88WYY40 pKa = 10.33EE41 pKa = 3.9IEE43 pKa = 4.14EE44 pKa = 4.55EE45 pKa = 4.18YY46 pKa = 11.07LEE48 pKa = 4.77KK49 pKa = 11.15YY50 pKa = 10.66NPDD53 pKa = 3.26EE54 pKa = 4.32YY55 pKa = 11.31EE56 pKa = 3.95EE57 pKa = 5.63LEE59 pKa = 4.43LGVFDD64 pKa = 4.93VDD66 pKa = 4.04NEE68 pKa = 4.4SGLWRR73 pKa = 11.84GEE75 pKa = 3.87YY76 pKa = 10.14DD77 pKa = 3.46VSEE80 pKa = 5.43LIDD83 pKa = 3.52KK84 pKa = 10.47LVEE87 pKa = 3.98IFTTEE92 pKa = 4.07YY93 pKa = 10.77YY94 pKa = 10.72DD95 pKa = 3.36VDD97 pKa = 4.24LEE99 pKa = 4.39IFEE102 pKa = 4.31FTQDD106 pKa = 3.57FFDD109 pKa = 3.78EE110 pKa = 4.7MGFSAYY116 pKa = 9.39EE117 pKa = 3.83VAQMVFFGNIKK128 pKa = 9.89SWGDD132 pKa = 3.31EE133 pKa = 4.18YY134 pKa = 10.95IGFTGAGNFEE144 pKa = 5.63SYY146 pKa = 8.91TQSEE150 pKa = 5.0YY151 pKa = 10.69EE152 pKa = 3.93AEE154 pKa = 3.82ALEE157 pKa = 4.15RR158 pKa = 11.84VKK160 pKa = 11.12DD161 pKa = 3.71LGLFF165 pKa = 3.75

Molecular weight: 19.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6A0B990|A0A6A0B990_9LACT Sodium:hydrogen antiporter OS=Lactococcus insecticola OX=2709158 GN=ydiF PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.29QPSKK9 pKa = 10.26RR10 pKa = 11.84KK11 pKa = 8.87RR12 pKa = 11.84QKK14 pKa = 8.05THH16 pKa = 5.1GFRR19 pKa = 11.84KK20 pKa = 10.02RR21 pKa = 11.84MSTKK25 pKa = 9.01NGRR28 pKa = 11.84RR29 pKa = 11.84VVASRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 9.23GRR39 pKa = 11.84AVLSAA44 pKa = 3.96

Molecular weight: 5.26 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1846

0

1846

585584

42

6996

317.2

35.22

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.531 ± 0.083

0.308 ± 0.014

6.689 ± 0.161

6.345 ± 0.074

4.438 ± 0.069

6.371 ± 0.061

1.736 ± 0.031

7.21 ± 0.081

6.923 ± 0.106

9.068 ± 0.095

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.412 ± 0.039

4.785 ± 0.055

3.279 ± 0.042

3.655 ± 0.04

3.72 ± 0.065

6.675 ± 0.246

6.535 ± 0.108

7.053 ± 0.05

0.808 ± 0.021

3.461 ± 0.046
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski