Flavobacterium album

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium

Average proteome isoelectric point is 6.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3477 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2S1R006|A0A2S1R006_9FLAO Uncharacterized protein OS=Flavobacterium album OX=2175091 GN=HYN59_12985 PE=4 SV=1
MM1 pKa = 7.71KK2 pKa = 10.35KK3 pKa = 9.89QLLLGAFLMASMFTAKK19 pKa = 10.44AQLSEE24 pKa = 4.47DD25 pKa = 3.9FEE27 pKa = 4.71GTAFPPEE34 pKa = 3.99GWTVEE39 pKa = 4.25TTNPDD44 pKa = 3.39ATWEE48 pKa = 4.07RR49 pKa = 11.84FTGNNSIGGTGSAGVGYY66 pKa = 10.48DD67 pKa = 3.65FDD69 pKa = 4.18QDD71 pKa = 3.28EE72 pKa = 4.68SLISPSFNLAGANPVLTFNILMGYY96 pKa = 6.42TWGVNPNNNYY106 pKa = 10.48DD107 pKa = 3.94VIVSVSNDD115 pKa = 3.11GGTSWDD121 pKa = 3.8QVWDD125 pKa = 4.0EE126 pKa = 4.63SEE128 pKa = 4.87LGVFTDD134 pKa = 3.73YY135 pKa = 11.32DD136 pKa = 4.25IIPVTVQLAAYY147 pKa = 9.48SGDD150 pKa = 3.75DD151 pKa = 3.11IKK153 pKa = 11.22IKK155 pKa = 10.67FEE157 pKa = 4.19YY158 pKa = 10.13VGNDD162 pKa = 3.05GDD164 pKa = 4.34VLIIDD169 pKa = 5.58DD170 pKa = 4.16IAVVACAVPSGFSYY184 pKa = 11.21LDD186 pKa = 3.64PAPSLTAVNIGWDD199 pKa = 3.6APAGSPEE206 pKa = 4.49GYY208 pKa = 9.6QFEE211 pKa = 4.47YY212 pKa = 10.68GPRR215 pKa = 11.84GFTQGGAGSMIINPTLPAANLTDD238 pKa = 5.2LDD240 pKa = 4.37PSTIYY245 pKa = 10.79DD246 pKa = 4.0FYY248 pKa = 11.85VRR250 pKa = 11.84THH252 pKa = 6.78CGGDD256 pKa = 4.56DD257 pKa = 3.46YY258 pKa = 11.7SEE260 pKa = 4.45WIGPVSFATLFDD272 pKa = 4.14AVTPPYY278 pKa = 9.24NTSFEE283 pKa = 4.44EE284 pKa = 4.08NNLDD288 pKa = 3.56FVGWIDD294 pKa = 4.24GTDD297 pKa = 3.34PDD299 pKa = 5.2AGVEE303 pKa = 3.94PWGVNVAVEE312 pKa = 4.36GDD314 pKa = 3.44ATVQDD319 pKa = 4.27GANSLFTFAPTNLDD333 pKa = 3.35SNAWLLSRR341 pKa = 11.84GINLTGGSQVTVSFWARR358 pKa = 11.84NLLGQGATGSASYY371 pKa = 11.32NLTVGNAQNAAAQTTNIATEE391 pKa = 4.2NDD393 pKa = 3.37LSSTTFVQKK402 pKa = 9.79TYY404 pKa = 9.43TFSPATSGVYY414 pKa = 9.56YY415 pKa = 10.36FGINNISPSNPNAQVLLVDD434 pKa = 3.96NFSVTEE440 pKa = 3.79ILGTKK445 pKa = 10.03DD446 pKa = 3.13VLASQLSIFPNPATNVINITNADD469 pKa = 3.99NILVNGVVIADD480 pKa = 3.66LNGRR484 pKa = 11.84TVKK487 pKa = 10.21SAKK490 pKa = 9.71FDD492 pKa = 3.81GVAEE496 pKa = 4.1AQVNISDD503 pKa = 4.77LANGMYY509 pKa = 9.81MMTVSSDD516 pKa = 2.78KK517 pKa = 10.85GTMTKK522 pKa = 10.28KK523 pKa = 9.91IVKK526 pKa = 9.42NN527 pKa = 3.66

Molecular weight: 56.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2S1QYK8|A0A2S1QYK8_9FLAO Lipase OS=Flavobacterium album OX=2175091 GN=HYN59_10350 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSKK10 pKa = 9.13RR11 pKa = 11.84KK12 pKa = 9.48RR13 pKa = 11.84RR14 pKa = 11.84NKK16 pKa = 9.53HH17 pKa = 4.24GFMEE21 pKa = 4.81RR22 pKa = 11.84MASANGRR29 pKa = 11.84KK30 pKa = 9.04VLARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 10.19GRR40 pKa = 11.84HH41 pKa = 5.41KK42 pKa = 10.14LTVSSEE48 pKa = 3.92PRR50 pKa = 11.84HH51 pKa = 5.77KK52 pKa = 10.61KK53 pKa = 9.84

Molecular weight: 6.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3477

0

3477

1167212

26

4638

335.7

37.55

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.572 ± 0.057

0.809 ± 0.016

5.621 ± 0.033

6.199 ± 0.059

4.981 ± 0.036

6.987 ± 0.052

1.747 ± 0.021

7.216 ± 0.047

6.991 ± 0.07

8.773 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.408 ± 0.024

5.685 ± 0.042

3.766 ± 0.031

3.286 ± 0.024

3.637 ± 0.038

6.16 ± 0.043

6.382 ± 0.096

6.464 ± 0.036

1.061 ± 0.013

4.256 ± 0.031
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski