Weissella koreensis (strain KACC 15510)

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Weissella; Weissella koreensis

Average proteome isoelectric point is 6.39

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1346 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F8HXX9|F8HXX9_WEIKK PST family polysaccharide transporter OS=Weissella koreensis (strain KACC 15510) OX=1045854 GN=WKK_00395 PE=4 SV=1
MM1 pKa = 7.07QSYY4 pKa = 10.0AEE6 pKa = 4.32KK7 pKa = 10.39MLDD10 pKa = 3.68EE11 pKa = 5.11LDD13 pKa = 4.12GGQLEE18 pKa = 4.17AAKK21 pKa = 10.48KK22 pKa = 10.51SFALSLRR29 pKa = 11.84HH30 pKa = 7.01DD31 pKa = 4.66DD32 pKa = 5.28DD33 pKa = 3.98EE34 pKa = 5.23TIHH37 pKa = 6.93SLAEE41 pKa = 3.55EE42 pKa = 4.82LYY44 pKa = 11.02ALGFSTNAKK53 pKa = 9.63RR54 pKa = 11.84AYY56 pKa = 9.92QKK58 pKa = 11.32LLDD61 pKa = 4.59KK62 pKa = 11.52YY63 pKa = 10.22PDD65 pKa = 3.47EE66 pKa = 5.06DD67 pKa = 3.73VLRR70 pKa = 11.84TEE72 pKa = 4.41LAEE75 pKa = 3.94ISISEE80 pKa = 4.2DD81 pKa = 3.31QSDD84 pKa = 3.5EE85 pKa = 3.81ALAYY89 pKa = 9.09LIPIQSDD96 pKa = 3.5SEE98 pKa = 4.55AYY100 pKa = 10.63LEE102 pKa = 4.31ALLVYY107 pKa = 10.72ADD109 pKa = 5.11LYY111 pKa = 10.73QSEE114 pKa = 4.65GLLEE118 pKa = 4.09AAEE121 pKa = 4.27NKK123 pKa = 8.78LTEE126 pKa = 4.69AYY128 pKa = 10.14QLAPDD133 pKa = 3.67EE134 pKa = 4.92LVIQFALAEE143 pKa = 4.18FLFEE147 pKa = 4.62LGRR150 pKa = 11.84YY151 pKa = 8.96SEE153 pKa = 5.72AIPFYY158 pKa = 10.9RR159 pKa = 11.84NLIVQGEE166 pKa = 4.39TQISGIDD173 pKa = 3.41LVSRR177 pKa = 11.84IGVAYY182 pKa = 10.56AMLGDD187 pKa = 3.67QNRR190 pKa = 11.84ALGYY194 pKa = 10.44LEE196 pKa = 4.28QIKK199 pKa = 10.23DD200 pKa = 3.51ANLTPEE206 pKa = 3.87VRR208 pKa = 11.84FQLGMLYY215 pKa = 10.78ANDD218 pKa = 3.92EE219 pKa = 4.25EE220 pKa = 4.74TRR222 pKa = 11.84DD223 pKa = 3.45QGIEE227 pKa = 3.93AFEE230 pKa = 4.02KK231 pKa = 10.71LIEE234 pKa = 4.58IDD236 pKa = 3.29PSYY239 pKa = 11.28AGVYY243 pKa = 9.77VPLGQLYY250 pKa = 7.72EE251 pKa = 4.11QKK253 pKa = 10.8QMPKK257 pKa = 9.95DD258 pKa = 3.29ALGIYY263 pKa = 8.9EE264 pKa = 5.05AGLAVDD270 pKa = 4.1QFNEE274 pKa = 3.89AGYY277 pKa = 11.17LNATRR282 pKa = 11.84VAIQLNEE289 pKa = 3.87NDD291 pKa = 3.63QAEE294 pKa = 4.21QLYY297 pKa = 10.5QKK299 pKa = 10.41GLKK302 pKa = 9.54NLPDD306 pKa = 3.82SQNLISNYY314 pKa = 9.6SQMLVDD320 pKa = 3.76TEE322 pKa = 4.47QYY324 pKa = 9.29MEE326 pKa = 4.64QINFLNQYY334 pKa = 9.69VSADD338 pKa = 3.89DD339 pKa = 4.57EE340 pKa = 4.89FEE342 pKa = 5.03LDD344 pKa = 3.94PKK346 pKa = 10.74EE347 pKa = 4.21YY348 pKa = 10.05WNLAQSYY355 pKa = 8.45TEE357 pKa = 3.96LEE359 pKa = 4.29RR360 pKa = 11.84YY361 pKa = 9.34EE362 pKa = 4.41MADD365 pKa = 3.44QYY367 pKa = 10.14WQAAVPFFNEE377 pKa = 3.13NSIFLKK383 pKa = 10.04EE384 pKa = 3.81AIYY387 pKa = 10.13YY388 pKa = 9.66FRR390 pKa = 11.84EE391 pKa = 4.43AGNHH395 pKa = 5.26EE396 pKa = 4.52MLSDD400 pKa = 4.31LLNKK404 pKa = 9.56YY405 pKa = 9.23VQLNPEE411 pKa = 4.54DD412 pKa = 4.94FEE414 pKa = 4.39MAQMEE419 pKa = 4.85SEE421 pKa = 4.26INDD424 pKa = 3.65LL425 pKa = 4.37

Molecular weight: 48.69 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F8I1A0|F8I1A0_WEIKK Alkaline phosphatase superfamily protein OS=Weissella koreensis (strain KACC 15510) OX=1045854 GN=WKK_03885 PE=3 SV=1
MM1 pKa = 7.36KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 9.69QPKK8 pKa = 8.34KK9 pKa = 7.47RR10 pKa = 11.84HH11 pKa = 5.71RR12 pKa = 11.84EE13 pKa = 3.7RR14 pKa = 11.84VHH16 pKa = 6.23GFRR19 pKa = 11.84KK20 pKa = 10.04RR21 pKa = 11.84MSTSNGRR28 pKa = 11.84KK29 pKa = 8.01VLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84QKK37 pKa = 10.39GRR39 pKa = 11.84KK40 pKa = 8.52VLSAA44 pKa = 4.05

Molecular weight: 5.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1346

0

1346

404084

30

2007

300.2

33.61

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.532 ± 0.073

0.185 ± 0.01

5.89 ± 0.07

6.045 ± 0.065

4.256 ± 0.054

6.595 ± 0.073

1.918 ± 0.028

7.841 ± 0.079

6.384 ± 0.075

9.945 ± 0.089

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.936 ± 0.04

5.405 ± 0.07

3.38 ± 0.036

4.72 ± 0.068

3.859 ± 0.053

5.927 ± 0.118

5.728 ± 0.047

6.993 ± 0.055

1.076 ± 0.027

3.388 ± 0.042
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski