Bat circovirus ZS/China/2011

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Dragonfly associated cyclovirus 4

Average proteome isoelectric point is 7.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G1D7G1|G1D7G1_9CIRC Putative capsid protein OS=Bat circovirus ZS/China/2011 OX=1072162 PE=4 SV=1
MM1 pKa = 7.84PCLQARR7 pKa = 11.84YY8 pKa = 8.35WLLTIPYY15 pKa = 9.12EE16 pKa = 4.19HH17 pKa = 6.85FTPYY21 pKa = 10.66LPPNCAYY28 pKa = 9.81IKK30 pKa = 10.65GQLEE34 pKa = 4.11QGSNTSYY41 pKa = 10.88LHH43 pKa = 5.57WQLVVYY49 pKa = 8.08FSQKK53 pKa = 10.32KK54 pKa = 8.36SLNYY58 pKa = 10.01VKK60 pKa = 10.7LIFGDD65 pKa = 5.23GIHH68 pKa = 6.8CEE70 pKa = 3.95PSKK73 pKa = 11.22SKK75 pKa = 10.7AAEE78 pKa = 3.93EE79 pKa = 4.42YY80 pKa = 9.67VWKK83 pKa = 9.97EE84 pKa = 3.73DD85 pKa = 3.29TSIPGTQFEE94 pKa = 4.78LGKK97 pKa = 10.62NSIKK101 pKa = 10.19RR102 pKa = 11.84DD103 pKa = 3.54STKK106 pKa = 11.07DD107 pKa = 2.47WDD109 pKa = 5.15LIVKK113 pKa = 9.16HH114 pKa = 6.14ARR116 pKa = 11.84EE117 pKa = 4.3GDD119 pKa = 3.63FASIPGDD126 pKa = 3.43VLVRR130 pKa = 11.84CYY132 pKa = 11.49GNLKK136 pKa = 9.9KK137 pKa = 10.4IRR139 pKa = 11.84VDD141 pKa = 3.35SLQPEE146 pKa = 4.59SIVRR150 pKa = 11.84EE151 pKa = 3.69IYY153 pKa = 10.28VYY155 pKa = 10.55YY156 pKa = 10.81GRR158 pKa = 11.84TGAGKK163 pKa = 9.71SRR165 pKa = 11.84RR166 pKa = 11.84AWEE169 pKa = 3.97EE170 pKa = 3.77ATLSAYY176 pKa = 9.81PKK178 pKa = 10.66DD179 pKa = 3.98PNTKK183 pKa = 9.62FWDD186 pKa = 4.78GYY188 pKa = 10.96AGQEE192 pKa = 4.02CVVIDD197 pKa = 4.08EE198 pKa = 4.38FRR200 pKa = 11.84GAISISHH207 pKa = 7.22LLRR210 pKa = 11.84WLDD213 pKa = 3.65RR214 pKa = 11.84YY215 pKa = 9.87PVIVEE220 pKa = 4.16IKK222 pKa = 10.51GSSCVFKK229 pKa = 10.9AKK231 pKa = 10.39KK232 pKa = 9.58IWITSNLSPDD242 pKa = 3.25DD243 pKa = 4.05WYY245 pKa = 10.61PDD247 pKa = 3.23LDD249 pKa = 4.92AEE251 pKa = 4.68TKK253 pKa = 9.62SALRR257 pKa = 11.84RR258 pKa = 11.84RR259 pKa = 11.84FTEE262 pKa = 4.13VVHH265 pKa = 6.78FNN267 pKa = 3.4

Molecular weight: 30.84 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G1D7G1|G1D7G1_9CIRC Putative capsid protein OS=Bat circovirus ZS/China/2011 OX=1072162 PE=4 SV=1
MM1 pKa = 6.47TQVIKK6 pKa = 11.17GMMALTLYY14 pKa = 10.38GINGTNDD21 pKa = 2.78GNTVQGCRR29 pKa = 11.84DD30 pKa = 2.97IYY32 pKa = 10.78RR33 pKa = 11.84IFKK36 pKa = 10.32NDD38 pKa = 3.71PDD40 pKa = 3.92VQQTGVAPGNEE51 pKa = 4.3PYY53 pKa = 10.31NGKK56 pKa = 8.88LQFGSGVLDD65 pKa = 3.23VTIRR69 pKa = 11.84NLSDD73 pKa = 3.67SIEE76 pKa = 4.44AEE78 pKa = 3.74VDD80 pKa = 3.11IYY82 pKa = 10.94TGWFRR87 pKa = 11.84KK88 pKa = 9.86SQDD91 pKa = 2.94NTAVLGSRR99 pKa = 11.84NPVTDD104 pKa = 4.33FSNPSAITPIAPGNTGTQIYY124 pKa = 10.33EE125 pKa = 3.95RR126 pKa = 11.84GTTLFDD132 pKa = 3.25GTTALSKK139 pKa = 9.88TGFHH143 pKa = 6.47IHH145 pKa = 7.04RR146 pKa = 11.84KK147 pKa = 6.68TKK149 pKa = 10.57SILAPTQSMFLQHH162 pKa = 7.26RR163 pKa = 11.84DD164 pKa = 3.8PKK166 pKa = 11.12NHH168 pKa = 6.34MIDD171 pKa = 3.14WVRR174 pKa = 11.84DD175 pKa = 3.62GVVGYY180 pKa = 10.23AKK182 pKa = 10.54KK183 pKa = 10.63GLTYY187 pKa = 11.13GMIIVWKK194 pKa = 9.06PSVLASSEE202 pKa = 4.43AIVPLAVGTTRR213 pKa = 11.84KK214 pKa = 8.13YY215 pKa = 8.63TYY217 pKa = 11.12AVVEE221 pKa = 4.44DD222 pKa = 3.91NLDD225 pKa = 3.77RR226 pKa = 11.84VCKK229 pKa = 10.5NPPLL233 pKa = 4.4

Molecular weight: 25.54 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

500

233

267

250.0

28.19

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.6 ± 0.013

1.6 ± 0.453

6.2 ± 0.145

4.6 ± 1.236

3.4 ± 0.241

7.6 ± 1.124

2.0 ± 0.173

6.8 ± 0.041

6.8 ± 0.745

7.2 ± 0.465

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.4 ± 0.717

4.4 ± 0.982

5.4 ± 0.109

3.4 ± 0.282

5.2 ± 0.292

6.8 ± 0.745

7.0 ± 1.752

7.2 ± 0.582

2.4 ± 0.679

5.0 ± 0.694
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski