Blueberry latent virus

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Amalgaviridae; Amalgavirus

Average proteome isoelectric point is 8.02

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|D1D8L7|D1D8L7_9VIRU ORF1 OS=Blueberry latent virus OX=430710 PE=4 SV=1
MM1 pKa = 7.66AGASGSILPVEE12 pKa = 4.53TTEE15 pKa = 3.86QTQARR20 pKa = 11.84VSTALAPLTGVLGNIEE36 pKa = 4.36RR37 pKa = 11.84FSVEE41 pKa = 4.54AIINSNLTVDD51 pKa = 4.22IFLKK55 pKa = 10.66AIKK58 pKa = 10.41SLVAYY63 pKa = 8.55AQQDD67 pKa = 3.29ILEE70 pKa = 5.05NIASAANTAGAIQHH84 pKa = 6.25VINMTPKK91 pKa = 10.74DD92 pKa = 4.03LFDD95 pKa = 4.26LSRR98 pKa = 11.84WVKK101 pKa = 8.75TAAGMEE107 pKa = 4.72AISKK111 pKa = 8.38ITTQRR116 pKa = 11.84RR117 pKa = 11.84LLRR120 pKa = 11.84QGGAGRR126 pKa = 11.84SASQVAWVNLFTQQQADD143 pKa = 3.72YY144 pKa = 9.9AQEE147 pKa = 4.49KK148 pKa = 8.31KK149 pKa = 10.77RR150 pKa = 11.84KK151 pKa = 4.9MTRR154 pKa = 11.84FEE156 pKa = 4.48RR157 pKa = 11.84KK158 pKa = 9.47RR159 pKa = 11.84EE160 pKa = 3.94DD161 pKa = 3.94LKK163 pKa = 11.55LQLAQLDD170 pKa = 3.95TDD172 pKa = 3.97EE173 pKa = 4.53AASMEE178 pKa = 4.23RR179 pKa = 11.84LAAKK183 pKa = 10.49YY184 pKa = 6.87PTQVALPATMEE195 pKa = 4.28TEE197 pKa = 4.48LVAACWAAYY206 pKa = 10.04VADD209 pKa = 4.1CDD211 pKa = 4.02RR212 pKa = 11.84RR213 pKa = 11.84GITPSAKK220 pKa = 9.39TNASLTEE227 pKa = 4.02AVKK230 pKa = 10.39HH231 pKa = 5.0YY232 pKa = 9.93SANVRR237 pKa = 11.84DD238 pKa = 4.35QILTTYY244 pKa = 10.46CEE246 pKa = 4.19QEE248 pKa = 4.16NVQADD253 pKa = 3.88LTRR256 pKa = 11.84YY257 pKa = 9.62ARR259 pKa = 11.84EE260 pKa = 4.22KK261 pKa = 9.76IQSFRR266 pKa = 11.84DD267 pKa = 3.25SGNQGGVTRR276 pKa = 11.84VRR278 pKa = 11.84NLYY281 pKa = 8.73TAATGAAIDD290 pKa = 4.1IPPPRR295 pKa = 11.84AQEE298 pKa = 4.32VPHH301 pKa = 5.63EE302 pKa = 4.41TGPVRR307 pKa = 11.84DD308 pKa = 5.31PIAQTGEE315 pKa = 3.91AQLQAVAHH323 pKa = 5.26QALTGVVIEE332 pKa = 4.94ADD334 pKa = 3.38PDD336 pKa = 3.72RR337 pKa = 11.84AQGEE341 pKa = 4.32ASSGDD346 pKa = 3.54SDD348 pKa = 3.68RR349 pKa = 11.84ASAASTEE356 pKa = 4.42STRR359 pKa = 11.84RR360 pKa = 11.84LQPDD364 pKa = 3.07RR365 pKa = 11.84RR366 pKa = 11.84VKK368 pKa = 10.54KK369 pKa = 10.11PRR371 pKa = 11.84TTGRR375 pKa = 3.22

Molecular weight: 40.75 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|D1D8L7|D1D8L7_9VIRU ORF1 OS=Blueberry latent virus OX=430710 PE=4 SV=1
MM1 pKa = 7.66AGASGSILPVEE12 pKa = 4.53TTEE15 pKa = 3.86QTQARR20 pKa = 11.84VSTALAPLTGVLGNIEE36 pKa = 4.36RR37 pKa = 11.84FSVEE41 pKa = 4.54AIINSNLTVDD51 pKa = 4.22IFLKK55 pKa = 10.66AIKK58 pKa = 10.41SLVAYY63 pKa = 8.55AQQDD67 pKa = 3.29ILEE70 pKa = 5.05NIASAANTAGAIQHH84 pKa = 6.25VINMTPKK91 pKa = 10.74DD92 pKa = 4.03LFDD95 pKa = 4.26LSRR98 pKa = 11.84WVKK101 pKa = 8.75TAAGMEE107 pKa = 4.72AISKK111 pKa = 8.38ITTQRR116 pKa = 11.84RR117 pKa = 11.84LLRR120 pKa = 11.84QGGAGRR126 pKa = 11.84SASQVAWVNLFTQQQADD143 pKa = 3.72YY144 pKa = 9.9AQEE147 pKa = 4.49KK148 pKa = 8.31KK149 pKa = 10.77RR150 pKa = 11.84KK151 pKa = 4.9MTRR154 pKa = 11.84FEE156 pKa = 4.48RR157 pKa = 11.84KK158 pKa = 9.47RR159 pKa = 11.84EE160 pKa = 3.94DD161 pKa = 3.94LKK163 pKa = 11.55LQLAQLDD170 pKa = 3.95TDD172 pKa = 3.97EE173 pKa = 4.53AASMEE178 pKa = 4.23RR179 pKa = 11.84LAAKK183 pKa = 10.49YY184 pKa = 6.87PTQVALPATMEE195 pKa = 4.28TEE197 pKa = 4.48LVAACWAAYY206 pKa = 10.04VADD209 pKa = 4.1CDD211 pKa = 4.02RR212 pKa = 11.84RR213 pKa = 11.84GITPSAKK220 pKa = 9.39TNASLTEE227 pKa = 4.02AVKK230 pKa = 10.39HH231 pKa = 5.0YY232 pKa = 9.93SANVRR237 pKa = 11.84DD238 pKa = 4.35QILTTYY244 pKa = 10.46CEE246 pKa = 4.19QEE248 pKa = 4.16NVQADD253 pKa = 3.88LTRR256 pKa = 11.84YY257 pKa = 9.62ARR259 pKa = 11.84EE260 pKa = 4.22KK261 pKa = 9.76IQSFRR266 pKa = 11.84DD267 pKa = 3.22SGNQEE272 pKa = 3.83EE273 pKa = 5.02SPVLEE278 pKa = 3.71ISIRR282 pKa = 11.84QQLEE286 pKa = 3.44QRR288 pKa = 11.84LISLPLEE295 pKa = 3.72LRR297 pKa = 11.84KK298 pKa = 9.56FHH300 pKa = 6.23MKK302 pKa = 9.46QVPFGIPLHH311 pKa = 5.86KK312 pKa = 9.89RR313 pKa = 11.84GRR315 pKa = 11.84PSCKK319 pKa = 9.47PLLTKK324 pKa = 10.81LSPEE328 pKa = 3.76LLLRR332 pKa = 11.84RR333 pKa = 11.84TQIGHH338 pKa = 5.99RR339 pKa = 11.84EE340 pKa = 3.93KK341 pKa = 10.61PPLGIRR347 pKa = 11.84TEE349 pKa = 4.27LAQPPLKK356 pKa = 10.68ALEE359 pKa = 4.45DD360 pKa = 3.84CSRR363 pKa = 11.84IGVLRR368 pKa = 11.84SLAPQADD375 pKa = 3.54KK376 pKa = 11.16LIPRR380 pKa = 11.84SRR382 pKa = 11.84SKK384 pKa = 10.47WEE386 pKa = 3.71AGVRR390 pKa = 11.84KK391 pKa = 9.86IIGGGEE397 pKa = 3.78LKK399 pKa = 10.69DD400 pKa = 3.3WFKK403 pKa = 11.45AKK405 pKa = 10.43SMYY408 pKa = 10.28RR409 pKa = 11.84GGGNLFDD416 pKa = 4.73ALRR419 pKa = 11.84LLSACDD425 pKa = 4.44DD426 pKa = 3.76YY427 pKa = 12.06DD428 pKa = 4.5GYY430 pKa = 9.88TRR432 pKa = 11.84LKK434 pKa = 10.61GNYY437 pKa = 7.94SVEE440 pKa = 3.97AARR443 pKa = 11.84EE444 pKa = 3.99KK445 pKa = 11.03LLLPSGLRR453 pKa = 11.84VPDD456 pKa = 3.76GVGCVHH462 pKa = 6.7MKK464 pKa = 10.44NFNDD468 pKa = 3.75EE469 pKa = 4.0ASAGPLCRR477 pKa = 11.84AFGIRR482 pKa = 11.84RR483 pKa = 11.84KK484 pKa = 10.3AGLKK488 pKa = 10.13SRR490 pKa = 11.84LEE492 pKa = 3.76QFAWEE497 pKa = 4.35IYY499 pKa = 10.51DD500 pKa = 4.39GIGNGDD506 pKa = 4.43LDD508 pKa = 4.92LGAIPPFLARR518 pKa = 11.84VGYY521 pKa = 7.7RR522 pKa = 11.84TKK524 pKa = 10.93LVTGEE529 pKa = 3.54KK530 pKa = 10.46AMRR533 pKa = 11.84KK534 pKa = 9.19ISTGDD539 pKa = 3.42SIGRR543 pKa = 11.84AIMMLDD549 pKa = 3.38AYY551 pKa = 8.96EE552 pKa = 4.1QAFSSPIFNVISDD565 pKa = 4.33AVTHH569 pKa = 6.16LHH571 pKa = 6.87SDD573 pKa = 3.51PTSGWRR579 pKa = 11.84NYY581 pKa = 10.47LIRR584 pKa = 11.84ASSDD588 pKa = 2.41WGKK591 pKa = 9.81MYY593 pKa = 11.07KK594 pKa = 9.73EE595 pKa = 3.68MRR597 pKa = 11.84KK598 pKa = 9.92AKK600 pKa = 10.44VVVEE604 pKa = 4.07LDD606 pKa = 2.85WKK608 pKa = 10.89KK609 pKa = 10.72FDD611 pKa = 3.81RR612 pKa = 11.84EE613 pKa = 3.9RR614 pKa = 11.84PADD617 pKa = 4.26HH618 pKa = 6.97ISFFIDD624 pKa = 3.93VILSCFAPRR633 pKa = 11.84TTRR636 pKa = 11.84EE637 pKa = 3.79EE638 pKa = 4.25KK639 pKa = 10.96LLGAYY644 pKa = 8.84RR645 pKa = 11.84RR646 pKa = 11.84AMEE649 pKa = 4.06NALLHH654 pKa = 6.1RR655 pKa = 11.84VLVTDD660 pKa = 4.23DD661 pKa = 4.3GGVLTVDD668 pKa = 3.62GMVPSGSLWTGIIGTGLNILYY689 pKa = 9.92IGYY692 pKa = 9.5ALSDD696 pKa = 3.33IGISPLNYY704 pKa = 9.42VPKK707 pKa = 10.68CAGDD711 pKa = 3.85DD712 pKa = 3.48NLTFFSRR719 pKa = 11.84DD720 pKa = 3.29YY721 pKa = 11.43GDD723 pKa = 4.02AAFKK727 pKa = 10.57RR728 pKa = 11.84LRR730 pKa = 11.84VKK732 pKa = 10.62LNEE735 pKa = 3.97MFRR738 pKa = 11.84ANIDD742 pKa = 3.42EE743 pKa = 4.22EE744 pKa = 4.61DD745 pKa = 4.58FIIHH749 pKa = 6.76RR750 pKa = 11.84PPFFVTKK757 pKa = 9.76AQAVFPPGTDD767 pKa = 3.19LSKK770 pKa = 10.48GTSSILNQCKK780 pKa = 8.03WVQFEE785 pKa = 4.36GEE787 pKa = 4.24IIIDD791 pKa = 3.53EE792 pKa = 4.39AMGLSHH798 pKa = 6.75RR799 pKa = 11.84WEE801 pKa = 3.9YY802 pKa = 11.05RR803 pKa = 11.84FQGKK807 pKa = 8.83PKK809 pKa = 10.29FLANYY814 pKa = 7.33WLPDD818 pKa = 3.23GRR820 pKa = 11.84SIRR823 pKa = 11.84PATDD827 pKa = 2.85SLEE830 pKa = 3.94RR831 pKa = 11.84LLYY834 pKa = 10.2PEE836 pKa = 5.48GLHH839 pKa = 5.74QTIEE843 pKa = 4.28DD844 pKa = 3.8YY845 pKa = 11.61EE846 pKa = 4.37MAVLAMVVDD855 pKa = 4.46NPWNSHH861 pKa = 4.71NVNHH865 pKa = 5.89MMHH868 pKa = 7.24RR869 pKa = 11.84FCIVQQIKK877 pKa = 8.69RR878 pKa = 11.84QSMVGIKK885 pKa = 10.4AEE887 pKa = 3.92DD888 pKa = 3.55VMWYY892 pKa = 10.21SKK894 pKa = 11.02LRR896 pKa = 11.84GKK898 pKa = 10.17EE899 pKa = 4.08GEE901 pKa = 4.55GIPYY905 pKa = 8.99PQVAYY910 pKa = 9.51WRR912 pKa = 11.84RR913 pKa = 11.84QEE915 pKa = 4.27KK916 pKa = 10.11KK917 pKa = 10.1VFMEE921 pKa = 5.15EE922 pKa = 3.55IPEE925 pKa = 3.86LMGYY929 pKa = 9.07IKK931 pKa = 10.65KK932 pKa = 9.86FQTFLSGVSTLYY944 pKa = 11.02SRR946 pKa = 11.84DD947 pKa = 3.37SAGGIDD953 pKa = 3.19AWMFMSILRR962 pKa = 11.84GEE964 pKa = 4.29RR965 pKa = 11.84DD966 pKa = 3.05VGAGQFGNDD975 pKa = 3.05IIEE978 pKa = 3.96WCKK981 pKa = 10.34FLNKK985 pKa = 10.12NPLTSGLRR993 pKa = 11.84AAKK996 pKa = 10.09RR997 pKa = 11.84FRR999 pKa = 11.84GEE1001 pKa = 3.83VRR1003 pKa = 11.84SEE1005 pKa = 3.83EE1006 pKa = 4.46ASTQVAQRR1014 pKa = 11.84WVEE1017 pKa = 3.97MISTVRR1023 pKa = 11.84EE1024 pKa = 3.87RR1025 pKa = 11.84LRR1027 pKa = 11.84NPLLGSPRR1035 pKa = 11.84SFALWVSDD1043 pKa = 3.39MYY1045 pKa = 11.63AEE1047 pKa = 4.26NVFSNVSS1054 pKa = 3.02

Molecular weight: 118.69 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1429

375

1054

714.5

79.72

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.357 ± 2.341

1.12 ± 0.164

5.318 ± 0.008

6.298 ± 0.084

3.289 ± 0.864

6.648 ± 0.673

1.4 ± 0.17

5.808 ± 0.379

5.388 ± 0.574

8.957 ± 0.899

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.519 ± 0.47

3.359 ± 0.081

4.269 ± 0.137

4.899 ± 1.177

7.838 ± 0.083

6.578 ± 0.227

5.738 ± 1.566

5.878 ± 0.267

1.61 ± 0.414

2.729 ± 0.305
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski