Hazenella coriacea

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Hazenella

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2870 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4R3L6K5|A0A4R3L6K5_9BACL tRNA (guanine-N(7)-)-methyltransferase OS=Hazenella coriacea OX=1179467 GN=trmB PE=3 SV=1
MM1 pKa = 7.62LIIFQFQDD9 pKa = 2.69GCNWYY14 pKa = 10.02DD15 pKa = 3.37EE16 pKa = 4.35YY17 pKa = 11.51MNDD20 pKa = 5.36LLPQSIIIGDD30 pKa = 3.7DD31 pKa = 3.33SGSGKK36 pKa = 9.82IVLVVDD42 pKa = 3.83PEE44 pKa = 4.51YY45 pKa = 11.09KK46 pKa = 10.18GVYY49 pKa = 8.73YY50 pKa = 9.86WDD52 pKa = 3.23HH53 pKa = 6.54TYY55 pKa = 11.4DD56 pKa = 4.31FEE58 pKa = 4.76QLSDD62 pKa = 3.7EE63 pKa = 4.28EE64 pKa = 4.31NTYY67 pKa = 10.77KK68 pKa = 10.47IADD71 pKa = 3.65SFQRR75 pKa = 11.84FIDD78 pKa = 3.98GLKK81 pKa = 10.66NPP83 pKa = 4.71

Molecular weight: 9.77 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4R3L6L7|A0A4R3L6L7_9BACL Proline iminopeptidase OS=Hazenella coriacea OX=1179467 GN=EDD58_10552 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.61RR3 pKa = 11.84TFQPSNRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.7NVHH16 pKa = 5.13GFRR19 pKa = 11.84ARR21 pKa = 11.84MSTKK25 pKa = 9.18NGRR28 pKa = 11.84RR29 pKa = 11.84ILSARR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84KK37 pKa = 8.85GRR39 pKa = 11.84KK40 pKa = 8.75VLSAA44 pKa = 4.05

Molecular weight: 5.27 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2870

0

2870

845007

30

5540

294.4

33.23

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.459 ± 0.042

0.834 ± 0.014

4.899 ± 0.033

7.327 ± 0.056

4.228 ± 0.034

6.78 ± 0.044

2.429 ± 0.026

7.452 ± 0.044

6.247 ± 0.043

10.205 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.732 ± 0.019

3.602 ± 0.031

4.077 ± 0.027

4.958 ± 0.037

4.723 ± 0.038

6.127 ± 0.039

5.209 ± 0.027

7.101 ± 0.036

1.288 ± 0.022

3.323 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski