Trichoplusia ni cypovirus 15

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Resentoviricetes; Reovirales; Reoviridae; Spinareovirinae; Cypovirus; Cypovirus 15

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9ELS6|Q9ELS6_9REOV Polyhedrin OS=Trichoplusia ni cypovirus 15 OX=134606 PE=1 SV=1
MM1 pKa = 7.76EE2 pKa = 6.72DD3 pKa = 2.98YY4 pKa = 10.32TLRR7 pKa = 11.84EE8 pKa = 4.1RR9 pKa = 11.84EE10 pKa = 3.72QEE12 pKa = 3.69IYY14 pKa = 10.39NRR16 pKa = 11.84QVIKK20 pKa = 10.72RR21 pKa = 11.84PFDD24 pKa = 4.13PDD26 pKa = 3.4SYY28 pKa = 10.66LTADD32 pKa = 3.59LHH34 pKa = 7.54LYY36 pKa = 9.67LKK38 pKa = 10.48NGKK41 pKa = 7.15TLTIHH46 pKa = 6.8IEE48 pKa = 3.89RR49 pKa = 11.84NLFFSHH55 pKa = 6.44EE56 pKa = 4.34FTWEE60 pKa = 4.2EE61 pKa = 3.89ICRR64 pKa = 11.84GAYY67 pKa = 9.43RR68 pKa = 11.84EE69 pKa = 4.6HH70 pKa = 6.63YY71 pKa = 9.92LSNSGPGKK79 pKa = 10.4CDD81 pKa = 3.03TQEE84 pKa = 4.42YY85 pKa = 10.17IDD87 pKa = 5.73GLVADD92 pKa = 3.95NGGRR96 pKa = 11.84STHH99 pKa = 5.78NSSYY103 pKa = 10.79LEE105 pKa = 3.82PVAFQLTLLGNFDD118 pKa = 4.6LGSIHH123 pKa = 7.06LRR125 pKa = 11.84IGDD128 pKa = 3.69YY129 pKa = 11.05LGFRR133 pKa = 11.84DD134 pKa = 4.65GQRR137 pKa = 11.84FPCKK141 pKa = 8.66EE142 pKa = 4.29TIHH145 pKa = 6.06GRR147 pKa = 11.84RR148 pKa = 11.84DD149 pKa = 3.47TIGPFMQGMSGKK161 pKa = 8.34WAKK164 pKa = 10.18EE165 pKa = 4.05DD166 pKa = 4.05YY167 pKa = 9.95IHH169 pKa = 6.87TYY171 pKa = 9.83SGRR174 pKa = 11.84FDD176 pKa = 4.44CKK178 pKa = 9.49TSRR181 pKa = 11.84HH182 pKa = 5.54PSIFLAFMRR191 pKa = 11.84ANQDD195 pKa = 2.95GHH197 pKa = 7.64SSFAPEE203 pKa = 3.86NMRR206 pKa = 11.84NALLYY211 pKa = 11.0SGDD214 pKa = 3.36KK215 pKa = 9.39SPRR218 pKa = 11.84YY219 pKa = 9.26ILMDD223 pKa = 3.76NEE225 pKa = 3.96HH226 pKa = 6.01TLINNFIIPRR236 pKa = 11.84CLPYY240 pKa = 9.86RR241 pKa = 11.84DD242 pKa = 4.24QYY244 pKa = 10.98GKK246 pKa = 10.54DD247 pKa = 3.52YY248 pKa = 11.58

Molecular weight: 28.95 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9ELS6|Q9ELS6_9REOV Polyhedrin OS=Trichoplusia ni cypovirus 15 OX=134606 PE=1 SV=1
MM1 pKa = 7.76EE2 pKa = 6.72DD3 pKa = 2.98YY4 pKa = 10.32TLRR7 pKa = 11.84EE8 pKa = 4.1RR9 pKa = 11.84EE10 pKa = 3.72QEE12 pKa = 3.69IYY14 pKa = 10.39NRR16 pKa = 11.84QVIKK20 pKa = 10.72RR21 pKa = 11.84PFDD24 pKa = 4.13PDD26 pKa = 3.4SYY28 pKa = 10.66LTADD32 pKa = 3.59LHH34 pKa = 7.54LYY36 pKa = 9.67LKK38 pKa = 10.48NGKK41 pKa = 7.15TLTIHH46 pKa = 6.8IEE48 pKa = 3.89RR49 pKa = 11.84NLFFSHH55 pKa = 6.44EE56 pKa = 4.34FTWEE60 pKa = 4.2EE61 pKa = 3.89ICRR64 pKa = 11.84GAYY67 pKa = 9.43RR68 pKa = 11.84EE69 pKa = 4.6HH70 pKa = 6.63YY71 pKa = 9.92LSNSGPGKK79 pKa = 10.4CDD81 pKa = 3.03TQEE84 pKa = 4.42YY85 pKa = 10.17IDD87 pKa = 5.73GLVADD92 pKa = 3.95NGGRR96 pKa = 11.84STHH99 pKa = 5.78NSSYY103 pKa = 10.79LEE105 pKa = 3.82PVAFQLTLLGNFDD118 pKa = 4.6LGSIHH123 pKa = 7.06LRR125 pKa = 11.84IGDD128 pKa = 3.69YY129 pKa = 11.05LGFRR133 pKa = 11.84DD134 pKa = 4.65GQRR137 pKa = 11.84FPCKK141 pKa = 8.66EE142 pKa = 4.29TIHH145 pKa = 6.06GRR147 pKa = 11.84RR148 pKa = 11.84DD149 pKa = 3.47TIGPFMQGMSGKK161 pKa = 8.34WAKK164 pKa = 10.18EE165 pKa = 4.05DD166 pKa = 4.05YY167 pKa = 9.95IHH169 pKa = 6.87TYY171 pKa = 9.83SGRR174 pKa = 11.84FDD176 pKa = 4.44CKK178 pKa = 9.49TSRR181 pKa = 11.84HH182 pKa = 5.54PSIFLAFMRR191 pKa = 11.84ANQDD195 pKa = 2.95GHH197 pKa = 7.64SSFAPEE203 pKa = 3.86NMRR206 pKa = 11.84NALLYY211 pKa = 11.0SGDD214 pKa = 3.36KK215 pKa = 9.39SPRR218 pKa = 11.84YY219 pKa = 9.26ILMDD223 pKa = 3.76NEE225 pKa = 3.96HH226 pKa = 6.01TLINNFIIPRR236 pKa = 11.84CLPYY240 pKa = 9.86RR241 pKa = 11.84DD242 pKa = 4.24QYY244 pKa = 10.98GKK246 pKa = 10.54DD247 pKa = 3.52YY248 pKa = 11.58

Molecular weight: 28.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

248

248

248

248.0

28.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

3.629 ± 0.0

2.016 ± 0.0

7.258 ± 0.0

6.048 ± 0.0

5.645 ± 0.0

8.065 ± 0.0

4.435 ± 0.0

6.452 ± 0.0

4.032 ± 0.0

8.871 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.419 ± 0.0

5.242 ± 0.0

4.435 ± 0.0

3.226 ± 0.0

8.065 ± 0.0

6.452 ± 0.0

5.242 ± 0.0

1.21 ± 0.0

0.806 ± 0.0

6.452 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski