Po-Circo-like virus 41

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G8E3Y2|G8E3Y2_9CIRC Uncharacterized protein OS=Po-Circo-like virus 41 OX=1105385 PE=4 SV=1
MM1 pKa = 7.21SRR3 pKa = 11.84IRR5 pKa = 11.84GTRR8 pKa = 11.84WCFTINNFTQEE19 pKa = 3.97EE20 pKa = 4.59EE21 pKa = 4.23EE22 pKa = 4.67LVMNMPSTGWVKK34 pKa = 11.3SMIAEE39 pKa = 4.11EE40 pKa = 3.94EE41 pKa = 4.27HH42 pKa = 7.39LFEE45 pKa = 4.66GTPHH49 pKa = 5.35IQGYY53 pKa = 7.13FTTTKK58 pKa = 9.76RR59 pKa = 11.84TDD61 pKa = 3.55FTALTKK67 pKa = 10.19FFNGRR72 pKa = 11.84AHH74 pKa = 7.45LEE76 pKa = 3.88QAKK79 pKa = 10.58GSTRR83 pKa = 11.84DD84 pKa = 2.9NWNYY88 pKa = 9.98CSKK91 pKa = 9.81EE92 pKa = 3.74GNVIVEE98 pKa = 4.73FNRR101 pKa = 11.84PSTVDD106 pKa = 3.48RR107 pKa = 11.84VPHH110 pKa = 6.63RR111 pKa = 11.84AHH113 pKa = 7.43EE114 pKa = 4.36DD115 pKa = 3.71PKK117 pKa = 11.51DD118 pKa = 3.34EE119 pKa = 4.39WADD122 pKa = 4.76LMIQDD127 pKa = 4.9CEE129 pKa = 4.29QMDD132 pKa = 3.84RR133 pKa = 11.84EE134 pKa = 4.71TFRR137 pKa = 11.84SEE139 pKa = 3.96HH140 pKa = 6.63PNFFLNQRR148 pKa = 11.84DD149 pKa = 3.75KK150 pKa = 11.6YY151 pKa = 10.36EE152 pKa = 4.72RR153 pKa = 11.84IHH155 pKa = 7.16NEE157 pKa = 3.34YY158 pKa = 10.2LARR161 pKa = 11.84TTTVFDD167 pKa = 4.51GRR169 pKa = 11.84LHH171 pKa = 7.42DD172 pKa = 4.25KK173 pKa = 10.79NIWIYY178 pKa = 10.8GPPGSGKK185 pKa = 8.61STLARR190 pKa = 11.84SDD192 pKa = 3.45TPIDD196 pKa = 3.87HH197 pKa = 7.38IYY199 pKa = 10.48FKK201 pKa = 10.78PVDD204 pKa = 3.66KK205 pKa = 10.17WWDD208 pKa = 3.37GFDD211 pKa = 3.55PSKK214 pKa = 10.86HH215 pKa = 5.28NRR217 pKa = 11.84IVMDD221 pKa = 4.89DD222 pKa = 4.06YY223 pKa = 11.57PNEE226 pKa = 4.12ATGGAIFTQRR236 pKa = 11.84MKK238 pKa = 10.35IWGDD242 pKa = 2.94RR243 pKa = 11.84TTEE246 pKa = 3.76PRR248 pKa = 11.84PVKK251 pKa = 10.53GGTITVDD258 pKa = 3.2PNIPFIVTSNFPIDD272 pKa = 3.42EE273 pKa = 4.47CFSNDD278 pKa = 2.85VDD280 pKa = 3.75RR281 pKa = 11.84EE282 pKa = 4.28AIHH285 pKa = 7.16RR286 pKa = 11.84RR287 pKa = 11.84FQEE290 pKa = 3.78IYY292 pKa = 10.97LDD294 pKa = 3.97GDD296 pKa = 3.32KK297 pKa = 11.37SKK299 pKa = 11.27LDD301 pKa = 3.21RR302 pKa = 11.84FMHH305 pKa = 6.42LKK307 pKa = 10.61NLINPEE313 pKa = 4.48DD314 pKa = 4.63PLDD317 pKa = 4.58CDD319 pKa = 4.6DD320 pKa = 6.25SIVSDD325 pKa = 3.69

Molecular weight: 38.02 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G8E3Y3|G8E3Y3_9CIRC Uncharacterized protein OS=Po-Circo-like virus 41 OX=1105385 PE=4 SV=1
MM1 pKa = 7.61FGICNRR7 pKa = 11.84GSIIFLMVYY16 pKa = 9.1RR17 pKa = 11.84RR18 pKa = 11.84SYY20 pKa = 8.99RR21 pKa = 11.84RR22 pKa = 11.84SYY24 pKa = 9.49SRR26 pKa = 11.84SYY28 pKa = 10.43SRR30 pKa = 11.84PVQPVRR36 pKa = 11.84YY37 pKa = 9.88SNEE40 pKa = 3.99TYY42 pKa = 10.95NVTFQYY48 pKa = 10.8QWTATPTSATVTMIPASEE66 pKa = 4.12VQGLRR71 pKa = 11.84KK72 pKa = 8.21TKK74 pKa = 10.68NFTLNISQSPTTNAQGVVQSTSSFIYY100 pKa = 10.34ALVYY104 pKa = 10.58VPAGTVAGAITIGNGNAAASLYY126 pKa = 10.35EE127 pKa = 4.05PNQNVICSGVCDD139 pKa = 3.84SSSGQLRR146 pKa = 11.84ISSRR150 pKa = 11.84LARR153 pKa = 11.84NLNSGDD159 pKa = 3.49SVALVLRR166 pKa = 11.84PTYY169 pKa = 8.1TTGTEE174 pKa = 4.24GNITRR179 pKa = 11.84ASVTLNFAIAYY190 pKa = 8.25

Molecular weight: 20.65 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

706

190

325

235.3

26.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.674 ± 1.343

1.7 ± 0.145

5.807 ± 2.37

4.958 ± 1.518

4.958 ± 0.798

6.799 ± 0.879

2.125 ± 1.011

6.799 ± 0.209

3.966 ± 1.08

5.524 ± 0.808

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.125 ± 0.394

6.799 ± 0.591

5.524 ± 0.47

3.399 ± 0.614

5.807 ± 1.533

8.782 ± 2.369

8.074 ± 0.982

5.949 ± 1.096

1.275 ± 0.733

4.958 ± 1.557
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski