Haloarcula hispanica pleomorphic virus 3

Taxonomy: Viruses; Monodnaviria; Trapavirae; Saleviricota; Huolimaviricetes; Haloruvirales; Pleolipoviridae; Betapleolipovirus; Betapleolipovirus HHPV3

Average proteome isoelectric point is 4.99

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 17 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1C8V5Y3|A0A1C8V5Y3_9VIRU Uncharacterized protein OS=Haloarcula hispanica pleomorphic virus 3 OX=1879051 PE=4 SV=1
MM1 pKa = 7.5AALAASPTMFGKK13 pKa = 9.89IDD15 pKa = 3.83IEE17 pKa = 4.21DD18 pKa = 3.8ALAGVIFTASAFVTNGIASISLLGYY43 pKa = 10.45DD44 pKa = 4.29LAASVFTVQGTSIDD58 pKa = 3.82LAFLLSLVALAMAYY72 pKa = 7.68ATNRR76 pKa = 11.84VNEE79 pKa = 4.26SRR81 pKa = 11.84NKK83 pKa = 10.3NYY85 pKa = 9.95QLDD88 pKa = 3.87TDD90 pKa = 4.62LVDD93 pKa = 3.32IAKK96 pKa = 10.58GSATVEE102 pKa = 4.21TYY104 pKa = 10.68LALGTLVIVLFTGLNILGAQDD125 pKa = 3.35IVVGSAAIGLTVVAVEE141 pKa = 3.67AAGYY145 pKa = 9.17YY146 pKa = 9.57VISYY150 pKa = 10.2LGG152 pKa = 3.24

Molecular weight: 15.63 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1C8V5Z2|A0A1C8V5Z2_9VIRU Uncharacterized protein OS=Haloarcula hispanica pleomorphic virus 3 OX=1879051 PE=4 SV=1
MM1 pKa = 7.34SRR3 pKa = 11.84SHH5 pKa = 6.95KK6 pKa = 10.07ANHH9 pKa = 6.33YY10 pKa = 6.72GTLVEE15 pKa = 4.69RR16 pKa = 11.84KK17 pKa = 8.94AAEE20 pKa = 4.35RR21 pKa = 11.84YY22 pKa = 10.16DD23 pKa = 4.4LDD25 pKa = 4.39LDD27 pKa = 3.64RR28 pKa = 11.84CSWHH32 pKa = 6.96DD33 pKa = 3.52AKK35 pKa = 11.02RR36 pKa = 11.84PDD38 pKa = 3.58GTPVEE43 pKa = 4.88IKK45 pKa = 10.56SAMHH49 pKa = 6.22RR50 pKa = 11.84HH51 pKa = 6.43ADD53 pKa = 3.76GQPGTFKK60 pKa = 11.04LYY62 pKa = 10.68DD63 pKa = 3.6RR64 pKa = 11.84YY65 pKa = 10.45HH66 pKa = 6.13RR67 pKa = 11.84RR68 pKa = 11.84LRR70 pKa = 11.84AEE72 pKa = 4.05NGWYY76 pKa = 10.3AFGVYY81 pKa = 8.82RR82 pKa = 11.84VRR84 pKa = 11.84GRR86 pKa = 11.84GIEE89 pKa = 3.94VLEE92 pKa = 3.82WEE94 pKa = 4.51IRR96 pKa = 11.84HH97 pKa = 6.05SSRR100 pKa = 11.84LPKK103 pKa = 10.15LDD105 pKa = 2.95WHH107 pKa = 6.83GGGIHH112 pKa = 7.4RR113 pKa = 11.84DD114 pKa = 3.22AKK116 pKa = 8.96QAKK119 pKa = 9.19IPVSEE124 pKa = 4.2LRR126 pKa = 11.84YY127 pKa = 10.11

Molecular weight: 14.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

17

0

17

3367

47

613

198.1

22.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.554 ± 0.698

0.743 ± 0.179

7.692 ± 0.45

8.108 ± 0.698

2.465 ± 0.287

7.722 ± 0.469

2.138 ± 0.36

5.227 ± 0.576

4.039 ± 0.352

7.069 ± 0.432

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.782 ± 0.16

3.713 ± 0.55

4.544 ± 0.423

4.514 ± 0.504

6.207 ± 0.888

6.118 ± 0.711

6.801 ± 0.706

6.742 ± 0.438

1.544 ± 0.27

4.277 ± 0.337
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski