Wenling crustacean virus 13

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Jingchuvirales; Chuviridae; Mivirus; Crustacean mivirus

Average proteome isoelectric point is 6.46

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KNB5|A0A1L3KNB5_9VIRU Putative glycoprotein OS=Wenling crustacean virus 13 OX=1923482 PE=4 SV=1
MM1 pKa = 7.48HH2 pKa = 6.51SHH4 pKa = 5.8VSIVHH9 pKa = 6.49GGHH12 pKa = 5.65EE13 pKa = 4.48AGRR16 pKa = 11.84MTLLPNQCLDD26 pKa = 3.18MHH28 pKa = 7.6KK29 pKa = 11.05NMAYY33 pKa = 8.68QHH35 pKa = 6.56HH36 pKa = 5.81GHH38 pKa = 6.07MVLLDD43 pKa = 4.0GPNTITDD50 pKa = 3.39ATITVAGSVDD60 pKa = 3.31SSGWCEE66 pKa = 3.56GSSFSHH72 pKa = 6.7RR73 pKa = 11.84GSSYY77 pKa = 8.49TSVVVVDD84 pKa = 3.52TLTIKK89 pKa = 10.53VKK91 pKa = 10.65QVDD94 pKa = 4.0ALVQATSGEE103 pKa = 4.1VHH105 pKa = 6.76LPNGVSCLLGSKK117 pKa = 9.98DD118 pKa = 4.33CYY120 pKa = 10.45HH121 pKa = 7.79PIYY124 pKa = 10.75GMAVIDD130 pKa = 3.66EE131 pKa = 4.55TNIGGCGDD139 pKa = 4.14DD140 pKa = 3.31SHH142 pKa = 7.68EE143 pKa = 4.79IIYY146 pKa = 9.15EE147 pKa = 4.13GPIEE151 pKa = 4.17MVSMFGDD158 pKa = 3.2SGEE161 pKa = 4.04DD162 pKa = 2.94EE163 pKa = 4.78RR164 pKa = 11.84YY165 pKa = 9.47FVVEE169 pKa = 3.93TPEE172 pKa = 3.96TVFALKK178 pKa = 10.08RR179 pKa = 11.84GKK181 pKa = 10.07KK182 pKa = 9.31IQVCRR187 pKa = 11.84EE188 pKa = 4.02NAWSTEE194 pKa = 3.88HH195 pKa = 6.96PKK197 pKa = 10.84LIVIPKK203 pKa = 8.78PEE205 pKa = 3.92WGFKK209 pKa = 6.94FTKK212 pKa = 9.93RR213 pKa = 11.84ISGASSVHH221 pKa = 6.77LIPYY225 pKa = 8.99VNSKK229 pKa = 9.83IQFLDD234 pKa = 3.53LKK236 pKa = 10.56VGQNMVRR243 pKa = 11.84TKK245 pKa = 10.84VEE247 pKa = 4.06LLEE250 pKa = 4.34QICEE254 pKa = 3.94NSRR257 pKa = 11.84KK258 pKa = 9.32IVEE261 pKa = 4.15NRR263 pKa = 11.84LMLAKK268 pKa = 10.57LFPHH272 pKa = 5.99QVASLHH278 pKa = 5.21YY279 pKa = 9.42NKK281 pKa = 9.27PGYY284 pKa = 8.53MGRR287 pKa = 11.84VSGEE291 pKa = 3.52ALHH294 pKa = 7.13IIKK297 pKa = 10.14CKK299 pKa = 9.25PVSVSGRR306 pKa = 11.84KK307 pKa = 9.32AEE309 pKa = 4.07GCYY312 pKa = 9.93QGIPVTHH319 pKa = 6.86KK320 pKa = 10.28NEE322 pKa = 3.93SWFLLPITRR331 pKa = 11.84ILSRR335 pKa = 11.84NAVEE339 pKa = 4.65TTCSRR344 pKa = 11.84RR345 pKa = 11.84LPNVYY350 pKa = 10.36LFGDD354 pKa = 3.94SWWEE358 pKa = 3.7LGPEE362 pKa = 4.18PRR364 pKa = 11.84PAQPPKK370 pKa = 10.17TMTVGSLLPQWGRR383 pKa = 11.84TRR385 pKa = 11.84TSPLGFGGLYY395 pKa = 9.94PYY397 pKa = 10.41RR398 pKa = 11.84DD399 pKa = 3.2MMAYY403 pKa = 9.04EE404 pKa = 3.93QALFGPVVTDD414 pKa = 2.94TGIAIMTRR422 pKa = 11.84KK423 pKa = 6.05MTGMASHH430 pKa = 7.86DD431 pKa = 3.73EE432 pKa = 4.53TFSSTKK438 pKa = 10.65LFDD441 pKa = 3.61QDD443 pKa = 5.27DD444 pKa = 3.83MGSFQDD450 pKa = 5.66SLIEE454 pKa = 4.48HH455 pKa = 6.3NWGPLAWMGEE465 pKa = 3.88ILAEE469 pKa = 4.15GAAVIVCIVLILLLLKK485 pKa = 10.68LVVRR489 pKa = 11.84VYY491 pKa = 11.0KK492 pKa = 10.63LWRR495 pKa = 11.84VSGAGPWLLWSILSVFTEE513 pKa = 5.08TYY515 pKa = 9.17TAIKK519 pKa = 10.28FITNLDD525 pKa = 4.34KK526 pKa = 10.93IPCSACHH533 pKa = 6.66PCTCHH538 pKa = 6.22TRR540 pKa = 11.84TDD542 pKa = 3.49STQEE546 pKa = 3.4IDD548 pKa = 3.69SEE550 pKa = 4.2NGRR553 pKa = 11.84LYY555 pKa = 10.38PVFSHH560 pKa = 7.33ADD562 pKa = 3.06IAVTNAEE569 pKa = 4.28VAA571 pKa = 3.53

Molecular weight: 63.33 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KN74|A0A1L3KN74_9VIRU Large structural protein OS=Wenling crustacean virus 13 OX=1923482 PE=4 SV=1
MM1 pKa = 7.96KK2 pKa = 10.15IPQILLKK9 pKa = 10.03HH10 pKa = 5.99PPVLYY15 pKa = 10.29VVVVMAQHH23 pKa = 4.74VHH25 pKa = 5.87LVNGLLDD32 pKa = 3.51KK33 pKa = 11.29AGFWRR38 pKa = 11.84EE39 pKa = 3.71VLKK42 pKa = 11.17QEE44 pKa = 4.2DD45 pKa = 5.1PYY47 pKa = 11.34MKK49 pKa = 10.45LCLRR53 pKa = 11.84HH54 pKa = 6.09CNARR58 pKa = 11.84PWVAPDD64 pKa = 5.22GIRR67 pKa = 11.84KK68 pKa = 8.45WGRR71 pKa = 11.84AMEE74 pKa = 4.38VAWLLSTRR82 pKa = 11.84IVATLRR88 pKa = 11.84VTTPHH93 pKa = 6.9SILVWTMMEE102 pKa = 3.85TLAPQVHH109 pKa = 6.91DD110 pKa = 3.46EE111 pKa = 4.27RR112 pKa = 11.84YY113 pKa = 9.51IPRR116 pKa = 11.84LEE118 pKa = 4.1ANALIVRR125 pKa = 11.84SVYY128 pKa = 10.61NDD130 pKa = 3.17SSFQSLVSNYY140 pKa = 8.97TDD142 pKa = 3.81ANLAQDD148 pKa = 4.27LHH150 pKa = 7.35DD151 pKa = 5.31LSQDD155 pKa = 3.34PDD157 pKa = 3.74FEE159 pKa = 5.3RR160 pKa = 11.84PANDD164 pKa = 3.86DD165 pKa = 3.72GVPTTIAIQFSAVANKK181 pKa = 10.1SAEE184 pKa = 3.95GAMAILWVLAKK195 pKa = 10.43RR196 pKa = 11.84SVNLHH201 pKa = 5.06TRR203 pKa = 11.84PAQVLVHH210 pKa = 5.94TLCALAKK217 pKa = 10.15QGNATQAFVEE227 pKa = 5.05KK228 pKa = 9.19ITQGFVTDD236 pKa = 3.36TGKK239 pKa = 9.74PLNLDD244 pKa = 3.3AEE246 pKa = 4.95GIEE249 pKa = 4.28ACWRR253 pKa = 11.84LIVHH257 pKa = 6.67HH258 pKa = 7.02VDD260 pKa = 3.5DD261 pKa = 5.35SNVEE265 pKa = 4.31AIVSDD270 pKa = 3.78WLAKK274 pKa = 10.29LPHH277 pKa = 6.09EE278 pKa = 4.43ALRR281 pKa = 11.84LRR283 pKa = 11.84ITLQQIPGEE292 pKa = 4.24GLTCITSIIKK302 pKa = 10.36AIQDD306 pKa = 3.38FPGFNWTWVYY316 pKa = 11.5KK317 pKa = 10.25NFPGEE322 pKa = 3.72MTAAGTASIAITNRR336 pKa = 11.84GFYY339 pKa = 10.23GYY341 pKa = 10.55KK342 pKa = 9.73KK343 pKa = 10.44DD344 pKa = 3.76LSLVKK349 pKa = 10.1AANFRR354 pKa = 11.84TVGYY358 pKa = 9.74IAQQLLVRR366 pKa = 11.84AGGEE370 pKa = 4.33GPLRR374 pKa = 11.84AAKK377 pKa = 10.43CFTRR381 pKa = 11.84TPKK384 pKa = 10.61LKK386 pKa = 10.76ALIDD390 pKa = 3.6QMIDD394 pKa = 3.32DD395 pKa = 5.28FIINAVTIPVNPGDD409 pKa = 4.27EE410 pKa = 4.34VPAGIWASIMGYY422 pKa = 8.64SVPPAPQPVLMAGPQPGGGHH442 pKa = 6.9GGGQLPPGGPGPGAPPAPPQPQAGPNVQGGNRR474 pKa = 11.84PP475 pKa = 3.35

Molecular weight: 51.7 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

3224

475

2178

1074.7

121.59

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.669 ± 1.071

2.233 ± 0.272

4.932 ± 0.195

6.234 ± 0.84

3.226 ± 0.153

5.552 ± 1.264

3.35 ± 0.239

6.328 ± 0.009

4.901 ± 0.202

10.205 ± 0.682

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.419 ± 0.294

3.66 ± 0.192

5.18 ± 0.958

3.412 ± 0.457

5.924 ± 0.783

6.886 ± 0.859

5.955 ± 0.23

7.444 ± 0.447

2.171 ± 0.041

3.319 ± 0.407
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski