Marixanthomonas sp. HN-E44

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Marixanthomonas; unclassified Marixanthomonas

Average proteome isoelectric point is 6.56

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3068 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U0HX65|A0A2U0HX65_9FLAO Uncharacterized protein OS=Marixanthomonas sp. HN-E44 OX=2174845 GN=DDV96_13620 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 9.05KK3 pKa = 8.31TLLLLITLCCGFCYY17 pKa = 9.6GQNYY21 pKa = 8.91NVSIYY26 pKa = 8.92QQIADD31 pKa = 3.76NKK33 pKa = 9.95GGFNAAIDD41 pKa = 3.59NADD44 pKa = 2.93WFGYY48 pKa = 8.77SVEE51 pKa = 5.08SIGDD55 pKa = 3.77LNGDD59 pKa = 3.77GIEE62 pKa = 4.13DD63 pKa = 3.84VVVGSLKK70 pKa = 10.92DD71 pKa = 3.48DD72 pKa = 4.08DD73 pKa = 5.2GGFNRR78 pKa = 11.84GALYY82 pKa = 10.94VLFLNRR88 pKa = 11.84DD89 pKa = 3.77GEE91 pKa = 4.17VDD93 pKa = 3.76SYY95 pKa = 11.81QKK97 pKa = 10.67ISDD100 pKa = 4.03TEE102 pKa = 4.25GGFQGVLDD110 pKa = 4.27DD111 pKa = 3.86WDD113 pKa = 3.82IFGSSISYY121 pKa = 10.56LGDD124 pKa = 3.18INNDD128 pKa = 2.73GFTEE132 pKa = 3.95IGVGAEE138 pKa = 3.81YY139 pKa = 10.81DD140 pKa = 3.37GDD142 pKa = 3.45GGYY145 pKa = 8.17WHH147 pKa = 6.88GAVWILSLDD156 pKa = 3.61SNGIVQSYY164 pKa = 10.66SKK166 pKa = 10.68ISDD169 pKa = 3.68TEE171 pKa = 4.28GGFLAPLGDD180 pKa = 3.62EE181 pKa = 5.02DD182 pKa = 5.76VFGTDD187 pKa = 2.94IASLGDD193 pKa = 3.71LNGDD197 pKa = 3.58GFGDD201 pKa = 3.38IVVSARR207 pKa = 11.84RR208 pKa = 11.84DD209 pKa = 3.38PDD211 pKa = 3.64GGSDD215 pKa = 3.18RR216 pKa = 11.84GAVYY220 pKa = 10.44ILFLNNDD227 pKa = 3.75LSVNNYY233 pKa = 8.34QKK235 pKa = 10.52ISQTQGNFQGYY246 pKa = 9.68LDD248 pKa = 4.34PGDD251 pKa = 3.93YY252 pKa = 10.8FGGAVANIGDD262 pKa = 3.89IDD264 pKa = 4.88LDD266 pKa = 4.09GVVDD270 pKa = 3.9IAVGAYY276 pKa = 9.72RR277 pKa = 11.84DD278 pKa = 3.93DD279 pKa = 5.58DD280 pKa = 4.26GGIDD284 pKa = 3.38QGAVYY289 pKa = 10.81VLFLNSDD296 pKa = 3.92GSVKK300 pKa = 10.39DD301 pKa = 3.59YY302 pKa = 11.53QKK304 pKa = 10.84ISDD307 pKa = 3.98VYY309 pKa = 11.01GGLEE313 pKa = 3.9TTFNNGMFFGTSIDD327 pKa = 3.48LAYY330 pKa = 10.48DD331 pKa = 3.23INDD334 pKa = 3.46NGLTEE339 pKa = 4.83IIVGAKK345 pKa = 10.16GYY347 pKa = 9.44WNEE350 pKa = 3.93EE351 pKa = 3.68NSEE354 pKa = 3.72IGAFYY359 pKa = 10.51ILEE362 pKa = 4.49LNNNGTVNNSVRR374 pKa = 11.84YY375 pKa = 7.54TKK377 pKa = 10.89GEE379 pKa = 3.85QFFDD383 pKa = 3.67GDD385 pKa = 4.23VVPEE389 pKa = 4.06SSFGFSVSYY398 pKa = 10.93NRR400 pKa = 11.84GLSTNDD406 pKa = 3.57AIVIGAHH413 pKa = 4.59TTGDD417 pKa = 3.07INGFEE422 pKa = 4.44NGSLWILQLGKK433 pKa = 10.05ILSIDD438 pKa = 4.7DD439 pKa = 3.21IDD441 pKa = 4.55GNNEE445 pKa = 3.85QILVYY450 pKa = 9.93PNPTNNSFSLHH461 pKa = 6.62EE462 pKa = 4.81IDD464 pKa = 6.35DD465 pKa = 3.58ILMIQIFDD473 pKa = 3.82SQGKK477 pKa = 9.48EE478 pKa = 3.49IISFKK483 pKa = 10.53DD484 pKa = 2.98IKK486 pKa = 11.2SNNFDD491 pKa = 3.4VSFLPVGVYY500 pKa = 10.18VILIKK505 pKa = 11.01SNNEE509 pKa = 4.18DD510 pKa = 2.91ISSYY514 pKa = 11.46KK515 pKa = 10.35LIKK518 pKa = 10.2NN519 pKa = 3.64

Molecular weight: 56.23 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U0I0V5|A0A2U0I0V5_9FLAO DUF4168 domain-containing protein OS=Marixanthomonas sp. HN-E44 OX=2174845 GN=DDV96_08880 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.59RR3 pKa = 11.84TFQPSKK9 pKa = 9.13RR10 pKa = 11.84KK11 pKa = 9.48RR12 pKa = 11.84RR13 pKa = 11.84NKK15 pKa = 9.49HH16 pKa = 3.94GFRR19 pKa = 11.84EE20 pKa = 4.18RR21 pKa = 11.84MASVNGRR28 pKa = 11.84KK29 pKa = 9.17VLAARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.02GRR39 pKa = 11.84KK40 pKa = 8.12KK41 pKa = 10.62LSVSSEE47 pKa = 4.03TRR49 pKa = 11.84HH50 pKa = 5.96KK51 pKa = 10.68KK52 pKa = 9.8

Molecular weight: 6.18 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3068

0

3068

1006229

24

4048

328.0

36.95

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.701 ± 0.048

0.726 ± 0.018

5.605 ± 0.039

6.92 ± 0.045

5.107 ± 0.038

6.47 ± 0.051

1.797 ± 0.021

7.321 ± 0.045

7.775 ± 0.063

9.221 ± 0.053

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.19 ± 0.028

5.882 ± 0.046

3.555 ± 0.024

3.52 ± 0.027

3.522 ± 0.037

6.109 ± 0.033

6.143 ± 0.067

6.434 ± 0.037

1.01 ± 0.017

3.992 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski