Wenyingzhuangia fucanilytica

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Wenyingzhuangia

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2747 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B1Y4Y1|A0A1B1Y4Y1_9FLAO Cyclic nucleotide-binding protein OS=Wenyingzhuangia fucanilytica OX=1790137 GN=AXE80_05665 PE=4 SV=1
MM1 pKa = 7.26KK2 pKa = 9.52TLKK5 pKa = 10.74LITALMFVSFLGFISCQKK23 pKa = 10.67EE24 pKa = 3.42IDD26 pKa = 4.01EE27 pKa = 5.12EE28 pKa = 4.25NGQNPNTNSVNSEE41 pKa = 3.94TAKK44 pKa = 10.62NLQRR48 pKa = 11.84TAMYY52 pKa = 10.27DD53 pKa = 3.3GSFDD57 pKa = 4.29DD58 pKa = 5.88FLDD61 pKa = 4.22GTSCSSVLFPVTVWVNNQKK80 pKa = 10.49IILTNKK86 pKa = 9.8NDD88 pKa = 3.54YY89 pKa = 10.86QLVLNILGEE98 pKa = 4.35VINDD102 pKa = 3.16EE103 pKa = 4.19DD104 pKa = 4.61TITFQFPISVKK115 pKa = 9.92LSNYY119 pKa = 9.4TEE121 pKa = 4.15VQVEE125 pKa = 4.03NQAEE129 pKa = 4.16YY130 pKa = 11.16NAIKK134 pKa = 9.05DD135 pKa = 3.62TCEE138 pKa = 3.32EE139 pKa = 4.09AEE141 pKa = 4.2AEE143 pKa = 4.15KK144 pKa = 11.03EE145 pKa = 4.07NAINCLKK152 pKa = 9.94MNYY155 pKa = 8.86PISILTYY162 pKa = 10.33NISLEE167 pKa = 4.27QTSTTVIEE175 pKa = 4.78SNQEE179 pKa = 3.63LYY181 pKa = 10.63TYY183 pKa = 9.73MSNFNEE189 pKa = 4.36DD190 pKa = 3.04EE191 pKa = 4.3KK192 pKa = 11.42FSIKK196 pKa = 10.68YY197 pKa = 8.91PISATLSNDD206 pKa = 3.25TEE208 pKa = 4.57VNISSDD214 pKa = 3.9AEE216 pKa = 4.34FKK218 pKa = 11.05SHH220 pKa = 7.49ISDD223 pKa = 3.88CLGDD227 pKa = 4.48EE228 pKa = 4.36DD229 pKa = 5.45TMDD232 pKa = 4.91DD233 pKa = 3.73AQEE236 pKa = 4.18DD237 pKa = 4.57AEE239 pKa = 4.31TLEE242 pKa = 4.66NILVEE247 pKa = 4.17GTFRR251 pKa = 11.84VQSYY255 pKa = 10.98INGGVDD261 pKa = 3.35TANTYY266 pKa = 11.37ANYY269 pKa = 9.83TIDD272 pKa = 3.57FANDD276 pKa = 3.66LTCSATNTANALAEE290 pKa = 4.22KK291 pKa = 10.9AEE293 pKa = 4.42GTFSVTSEE301 pKa = 4.02MEE303 pKa = 3.92VFLTLEE309 pKa = 4.42FSSEE313 pKa = 4.18ANFEE317 pKa = 4.46LLNDD321 pKa = 3.35TWTVTNYY328 pKa = 10.09SSSSITLQSTTNTSTALVLNQII350 pKa = 4.41

Molecular weight: 38.99 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B1Y7W9|A0A1B1Y7W9_9FLAO 30S ribosomal protein S12 OS=Wenyingzhuangia fucanilytica OX=1790137 GN=rpsL PE=3 SV=1
MM1 pKa = 7.54SVRR4 pKa = 11.84KK5 pKa = 9.68LKK7 pKa = 10.5PITPGQRR14 pKa = 11.84FRR16 pKa = 11.84VVNGFDD22 pKa = 5.49AITTDD27 pKa = 3.56KK28 pKa = 11.07PEE30 pKa = 4.39KK31 pKa = 10.58SLLAPNKK38 pKa = 10.19RR39 pKa = 11.84SGGRR43 pKa = 11.84NNSGRR48 pKa = 11.84MTMRR52 pKa = 11.84YY53 pKa = 9.71VGGGHH58 pKa = 6.68KK59 pKa = 9.72KK60 pKa = 9.76RR61 pKa = 11.84YY62 pKa = 9.53RR63 pKa = 11.84IIDD66 pKa = 3.52FNRR69 pKa = 11.84DD70 pKa = 3.14KK71 pKa = 11.15FGVEE75 pKa = 3.76ATVKK79 pKa = 9.91TIEE82 pKa = 4.03YY83 pKa = 9.86DD84 pKa = 3.47PNRR87 pKa = 11.84TAFIALVEE95 pKa = 4.25YY96 pKa = 10.5TDD98 pKa = 3.61GEE100 pKa = 4.17KK101 pKa = 10.32RR102 pKa = 11.84YY103 pKa = 10.63VIAQAGLQVGQTIVSNNDD121 pKa = 3.32AITPDD126 pKa = 3.47VGNAMPLANIPLGTTICCIEE146 pKa = 4.14LRR148 pKa = 11.84PGQGAVMARR157 pKa = 11.84SAGSFAQLMAKK168 pKa = 8.96EE169 pKa = 4.42GKK171 pKa = 9.47YY172 pKa = 9.15ATVKK176 pKa = 10.52LPSGEE181 pKa = 4.06TRR183 pKa = 11.84LILLTCIATIGVVSNSDD200 pKa = 3.21HH201 pKa = 6.09QLLVSGKK208 pKa = 9.49AGRR211 pKa = 11.84SRR213 pKa = 11.84WLGRR217 pKa = 11.84RR218 pKa = 11.84PRR220 pKa = 11.84TNAVRR225 pKa = 11.84MNPVDD230 pKa = 3.4HH231 pKa = 7.07PMGGGEE237 pKa = 4.08GRR239 pKa = 11.84SSGGHH244 pKa = 4.7PRR246 pKa = 11.84SRR248 pKa = 11.84NGIPAKK254 pKa = 10.28GYY256 pKa = 7.21KK257 pKa = 8.8TRR259 pKa = 11.84SKK261 pKa = 9.63TKK263 pKa = 10.38ASNKK267 pKa = 9.94YY268 pKa = 8.99ILEE271 pKa = 4.09RR272 pKa = 11.84RR273 pKa = 11.84KK274 pKa = 10.2KK275 pKa = 9.94

Molecular weight: 30.01 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2747

0

2747

1031829

54

2341

375.6

42.38

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.177 ± 0.043

0.756 ± 0.011

5.519 ± 0.032

6.486 ± 0.04

5.026 ± 0.03

6.461 ± 0.041

1.876 ± 0.019

7.883 ± 0.046

8.25 ± 0.05

9.008 ± 0.043

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.103 ± 0.019

6.597 ± 0.05

3.397 ± 0.023

3.353 ± 0.021

3.066 ± 0.025

6.332 ± 0.038

5.983 ± 0.04

6.394 ± 0.037

1.115 ± 0.02

4.218 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski