Aotine betaherpesvirus 1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Cytomegalovirus

Average proteome isoelectric point is 6.87

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 146 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|G8XU82|G8XU82_9BETA Protein A9 OS=Aotine betaherpesvirus 1 OX=50290 GN=A9 PE=4 SV=1
MM1 pKa = 7.9AEE3 pKa = 4.29PGEE6 pKa = 4.09PSEE9 pKa = 4.46PGEE12 pKa = 4.3PNTPLRR18 pKa = 11.84NAEE21 pKa = 4.1PQLDD25 pKa = 4.01FQSPHH30 pKa = 4.36QQGNEE35 pKa = 3.76DD36 pKa = 3.65TEE38 pKa = 4.31PRR40 pKa = 11.84NKK42 pKa = 10.39CPVLLLMLLLLPLFIQILAMIITFILSNQNPIAAGICSVMFLLSAISTAIIICNVLTYY100 pKa = 10.72GYY102 pKa = 10.48FF103 pKa = 3.34

Molecular weight: 11.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|G8XUH6|G8XUH6_9BETA Membrane glycoprotein UL119 OS=Aotine betaherpesvirus 1 OX=50290 GN=UL119 PE=4 SV=1
MM1 pKa = 7.16FSKK4 pKa = 11.11VEE6 pKa = 4.22IIRR9 pKa = 11.84VRR11 pKa = 11.84EE12 pKa = 4.06PIKK15 pKa = 10.99LNSEE19 pKa = 4.15SLAPANKK26 pKa = 9.63RR27 pKa = 11.84KK28 pKa = 9.85RR29 pKa = 11.84NRR31 pKa = 11.84AIVISPQTQGFVKK44 pKa = 10.45IPPDD48 pKa = 3.48NKK50 pKa = 9.99NVNSVRR56 pKa = 11.84IVGSRR61 pKa = 11.84PARR64 pKa = 11.84RR65 pKa = 11.84PSPLQPPQPRR75 pKa = 11.84HH76 pKa = 4.46QQPRR80 pKa = 11.84TYY82 pKa = 10.19PYY84 pKa = 8.21GTSLVRR90 pKa = 11.84RR91 pKa = 11.84RR92 pKa = 11.84RR93 pKa = 11.84IRR95 pKa = 11.84PNGAQHH101 pKa = 7.27LIQRR105 pKa = 11.84YY106 pKa = 6.85GHH108 pKa = 6.46ILEE111 pKa = 4.33EE112 pKa = 4.17LARR115 pKa = 11.84LLQMYY120 pKa = 10.16DD121 pKa = 3.03STAVQLQVNSLCGNSFNQLKK141 pKa = 8.17TAVLKK146 pKa = 10.12LQNVTVLTGMQMATQCLPHH165 pKa = 7.32DD166 pKa = 4.16ARR168 pKa = 11.84AVSTFKK174 pKa = 10.38HH175 pKa = 5.94HH176 pKa = 6.06EE177 pKa = 3.86RR178 pKa = 11.84LGRR181 pKa = 11.84FMDD184 pKa = 3.75NVAPVLPRR192 pKa = 11.84SSCYY196 pKa = 10.79ADD198 pKa = 2.84TGLYY202 pKa = 9.32QMCISGATRR211 pKa = 11.84KK212 pKa = 10.35DD213 pKa = 3.49LVDD216 pKa = 3.4ATTLCISIIDD226 pKa = 3.57QRR228 pKa = 11.84PNVFNINIAKK238 pKa = 10.46LSYY241 pKa = 9.7PSLAGLHH248 pKa = 6.32LGTYY252 pKa = 10.35NEE254 pKa = 4.31FSNTVVAA261 pKa = 5.46

Molecular weight: 29.32 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

146

0

146

56898

60

2158

389.7

43.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.724 ± 0.364

2.54 ± 0.116

4.981 ± 0.13

5.338 ± 0.171

4.123 ± 0.12

5.44 ± 0.181

2.805 ± 0.096

4.425 ± 0.158

3.71 ± 0.159

9.999 ± 0.173

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.332 ± 0.094

3.87 ± 0.175

5.515 ± 0.235

3.573 ± 0.121

6.796 ± 0.19

7.524 ± 0.192

6.84 ± 0.322

7.589 ± 0.221

1.25 ± 0.087

3.626 ± 0.105
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski