Dragonfly larvae associated circular virus-10

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 7.45

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W5U2Q8|W5U2Q8_9VIRU Putative capsid protein OS=Dragonfly larvae associated circular virus-10 OX=1454022 PE=4 SV=1
MM1 pKa = 7.72PKK3 pKa = 10.08VKK5 pKa = 10.17QGSQGEE11 pKa = 4.38RR12 pKa = 11.84WCFTLNNYY20 pKa = 7.23TEE22 pKa = 4.87KK23 pKa = 10.79DD24 pKa = 3.6VASITEE30 pKa = 4.15KK31 pKa = 10.4LTFSNCVFAKK41 pKa = 9.42VGKK44 pKa = 9.98EE45 pKa = 3.62IGDD48 pKa = 3.45SGTPHH53 pKa = 6.26LQGFIHH59 pKa = 6.22LRR61 pKa = 11.84KK62 pKa = 9.6RR63 pKa = 11.84LRR65 pKa = 11.84LACLKK70 pKa = 10.76KK71 pKa = 10.62LVGDD75 pKa = 4.08RR76 pKa = 11.84AHH78 pKa = 6.95CEE80 pKa = 3.91VARR83 pKa = 11.84GTDD86 pKa = 3.33KK87 pKa = 11.49DD88 pKa = 3.73NEE90 pKa = 4.68SYY92 pKa = 10.6CGKK95 pKa = 10.47DD96 pKa = 2.83SDD98 pKa = 4.25VVLTIGEE105 pKa = 4.24PTIGTTEE112 pKa = 3.8QGGGDD117 pKa = 4.2TIHH120 pKa = 6.98SIARR124 pKa = 11.84RR125 pKa = 11.84IALKK129 pKa = 10.4LSKK132 pKa = 10.22GTDD135 pKa = 2.86ITEE138 pKa = 4.21LQGEE142 pKa = 4.31EE143 pKa = 3.32WKK145 pKa = 10.68AYY147 pKa = 9.19CRR149 pKa = 11.84HH150 pKa = 5.88SKK152 pKa = 10.43VIQEE156 pKa = 4.14LSAALVKK163 pKa = 10.81NKK165 pKa = 10.2NIKK168 pKa = 9.91DD169 pKa = 3.5QAAQMSDD176 pKa = 2.82KK177 pKa = 10.67PLRR180 pKa = 11.84TWQKK184 pKa = 8.35EE185 pKa = 4.06LKK187 pKa = 10.29NAIQTVPDD195 pKa = 3.64DD196 pKa = 4.44RR197 pKa = 11.84KK198 pKa = 11.06VMWYY202 pKa = 9.56CDD204 pKa = 3.57SVGNTGKK211 pKa = 7.88TWFSKK216 pKa = 10.97YY217 pKa = 9.94LVALHH222 pKa = 5.77GAIRR226 pKa = 11.84FEE228 pKa = 4.3NGKK231 pKa = 9.72SADD234 pKa = 2.81IKK236 pKa = 10.1YY237 pKa = 9.96AYY239 pKa = 9.99NGEE242 pKa = 4.14RR243 pKa = 11.84VVVFDD248 pKa = 4.9LSRR251 pKa = 11.84SQVDD255 pKa = 3.12HH256 pKa = 6.69FNYY259 pKa = 10.21EE260 pKa = 4.09VIEE263 pKa = 4.41SIKK266 pKa = 10.44NGLMFSPKK274 pKa = 8.87YY275 pKa = 8.71TSCTKK280 pKa = 9.95MYY282 pKa = 8.29PIPHH286 pKa = 6.39VIVFANWMSDD296 pKa = 3.3EE297 pKa = 4.67SKK299 pKa = 10.9LSADD303 pKa = 2.99RR304 pKa = 11.84WKK306 pKa = 10.5IEE308 pKa = 4.03SLSDD312 pKa = 3.25VSKK315 pKa = 10.81IKK317 pKa = 10.55CEE319 pKa = 4.1KK320 pKa = 10.01EE321 pKa = 3.42DD322 pKa = 3.78DD323 pKa = 4.32VIVNDD328 pKa = 4.1VIVIEE333 pKa = 5.01DD334 pKa = 4.34DD335 pKa = 5.02DD336 pKa = 4.3VQQEE340 pKa = 4.27QIDD343 pKa = 4.44SYY345 pKa = 11.4FSNLFDD351 pKa = 3.43NWGPDD356 pKa = 3.47CVGDD360 pKa = 3.83LDD362 pKa = 4.73EE363 pKa = 4.52YY364 pKa = 11.15QQ365 pKa = 3.36

Molecular weight: 41.34 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W5U2Q8|W5U2Q8_9VIRU Putative capsid protein OS=Dragonfly larvae associated circular virus-10 OX=1454022 PE=4 SV=1
MM1 pKa = 7.18IKK3 pKa = 10.0AYY5 pKa = 10.0RR6 pKa = 11.84VGRR9 pKa = 11.84EE10 pKa = 4.02RR11 pKa = 11.84IATTQLSAVTMAPYY25 pKa = 10.67RR26 pKa = 11.84NLTRR30 pKa = 11.84GRR32 pKa = 11.84YY33 pKa = 6.6SAKK36 pKa = 9.3RR37 pKa = 11.84RR38 pKa = 11.84YY39 pKa = 7.24RR40 pKa = 11.84TRR42 pKa = 11.84RR43 pKa = 11.84VTRR46 pKa = 11.84KK47 pKa = 9.09RR48 pKa = 11.84YY49 pKa = 9.49ARR51 pKa = 11.84TRR53 pKa = 11.84FSKK56 pKa = 10.52RR57 pKa = 11.84RR58 pKa = 11.84FGHH61 pKa = 6.65RR62 pKa = 11.84NRR64 pKa = 11.84SWAMRR69 pKa = 11.84KK70 pKa = 9.69RR71 pKa = 11.84ISNRR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 11.84SGTKK81 pKa = 8.36VLKK84 pKa = 10.3VVHH87 pKa = 6.79RR88 pKa = 11.84WTIDD92 pKa = 2.89KK93 pKa = 10.93SFEE96 pKa = 3.74NGIYY100 pKa = 9.79TDD102 pKa = 4.25CLSMNASDD110 pKa = 4.55VNNLPGWAQLTVLYY124 pKa = 10.55DD125 pKa = 3.07EE126 pKa = 4.9WKK128 pKa = 10.1PGKK131 pKa = 10.19KK132 pKa = 9.77YY133 pKa = 9.87MKK135 pKa = 10.34SFVPFDD141 pKa = 3.32KK142 pKa = 11.4YY143 pKa = 11.25EE144 pKa = 4.29NEE146 pKa = 4.13VSDD149 pKa = 3.79NAEE152 pKa = 4.33LIVRR156 pKa = 11.84WSAYY160 pKa = 10.6DD161 pKa = 3.49PDD163 pKa = 3.99AKK165 pKa = 10.61GRR167 pKa = 11.84KK168 pKa = 7.07FTAARR173 pKa = 11.84AVSDD177 pKa = 3.73MEE179 pKa = 4.78KK180 pKa = 9.23MQNSKK185 pKa = 9.5WKK187 pKa = 10.19LIKK190 pKa = 10.29KK191 pKa = 8.09NQVVSTSYY199 pKa = 11.12QPMFPTRR206 pKa = 11.84TGVNLTGVKK215 pKa = 10.4GVDD218 pKa = 3.6NPWRR222 pKa = 11.84DD223 pKa = 3.53CVASVTSEE231 pKa = 3.68QCQNGVQQVWKK242 pKa = 10.48VNTPTTLVTRR252 pKa = 11.84HH253 pKa = 5.95YY254 pKa = 7.86FTQVYY259 pKa = 7.88YY260 pKa = 10.9FRR262 pKa = 11.84GLRR265 pKa = 11.84IGTQYY270 pKa = 10.39GAQYY274 pKa = 10.81EE275 pKa = 4.55PVTPAFPEE283 pKa = 4.17VVPPLKK289 pKa = 10.57KK290 pKa = 9.22VDD292 pKa = 3.48RR293 pKa = 11.84MRR295 pKa = 11.84TEE297 pKa = 3.5

Molecular weight: 34.83 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

662

297

365

331.0

38.08

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.589 ± 0.315

1.964 ± 0.638

6.495 ± 1.642

5.287 ± 1.059

3.323 ± 0.029

5.891 ± 0.562

1.662 ± 0.436

4.834 ± 1.431

8.761 ± 0.455

5.589 ± 0.811

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.266 ± 0.511

4.683 ± 0.246

3.474 ± 0.829

4.079 ± 0.026

7.553 ± 2.83

6.798 ± 0.493

6.647 ± 1.184

8.459 ± 0.648

2.417 ± 0.185

4.23 ± 0.774
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski