Alternaria alternata chrysovirus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Duplornaviricota; Chrymotiviricetes; Ghabrivirales; Chrysoviridae; Betachrysovirus; Alternaria alternata chrysovirus

Average proteome isoelectric point is 6.66

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2Z5X7B8|A0A2Z5X7B8_9VIRU Uncharacterized protein OS=Alternaria alternata chrysovirus 1 OX=2066695 PE=4 SV=1
MM1 pKa = 7.96ADD3 pKa = 3.24QSEE6 pKa = 4.8DD7 pKa = 3.75LPPSYY12 pKa = 11.15SLTPNTTSSSPSARR26 pKa = 11.84PFEE29 pKa = 4.61RR30 pKa = 11.84MMEE33 pKa = 4.16ALTVRR38 pKa = 11.84SAAVTTWSEE47 pKa = 3.95QVEE50 pKa = 4.37AEE52 pKa = 4.24AEE54 pKa = 3.92EE55 pKa = 4.9GLQQEE60 pKa = 4.72VSVGGTSLKK69 pKa = 10.37LARR72 pKa = 11.84LDD74 pKa = 3.35YY75 pKa = 11.36GMARR79 pKa = 11.84DD80 pKa = 3.77PVPPQEE86 pKa = 3.83RR87 pKa = 11.84LQYY90 pKa = 10.53QRR92 pKa = 11.84GLRR95 pKa = 11.84GTTLLRR101 pKa = 11.84TAASRR106 pKa = 11.84AAVPCSDD113 pKa = 4.08CEE115 pKa = 3.91ISRR118 pKa = 11.84VCAGVPYY125 pKa = 10.39GPGVKK130 pKa = 10.13SLGWTKK136 pKa = 11.04AEE138 pKa = 4.06QKK140 pKa = 10.9ASLVVLDD147 pKa = 5.23TVASMLVRR155 pKa = 11.84GFRR158 pKa = 11.84KK159 pKa = 9.71GVSKK163 pKa = 8.32MTLPKK168 pKa = 10.26GSRR171 pKa = 11.84VTLSEE176 pKa = 3.84WPEE179 pKa = 3.52QNLYY183 pKa = 8.24HH184 pKa = 6.31TEE186 pKa = 3.69VGYY189 pKa = 7.82TWWSAVLVAPSDD201 pKa = 3.75NIIRR205 pKa = 11.84VMMHH209 pKa = 5.95VDD211 pKa = 3.38GTTLLDD217 pKa = 3.24IAGGDD222 pKa = 3.47EE223 pKa = 4.09MLEE226 pKa = 4.08ARR228 pKa = 11.84HH229 pKa = 6.42RR230 pKa = 11.84DD231 pKa = 3.57PDD233 pKa = 3.7LHH235 pKa = 7.88SDD237 pKa = 4.37LLVLLAGVQHH247 pKa = 7.34AILADD252 pKa = 3.76EE253 pKa = 5.02LSASYY258 pKa = 10.71HH259 pKa = 5.97LLQDD263 pKa = 3.53ASLATMRR270 pKa = 11.84QHH272 pKa = 7.28VSTTSAGSTDD282 pKa = 3.18QGGYY286 pKa = 10.67AGGGPNHH293 pKa = 6.68ALWSEE298 pKa = 4.06GEE300 pKa = 4.23YY301 pKa = 10.98LSDD304 pKa = 5.59DD305 pKa = 3.65LVQDD309 pKa = 3.41RR310 pKa = 11.84RR311 pKa = 11.84VPTAYY316 pKa = 10.78YY317 pKa = 10.24DD318 pKa = 3.76ANLDD322 pKa = 3.47LTAYY326 pKa = 9.7GLASAGDD333 pKa = 4.09LPPAVLVALGANGGKK348 pKa = 10.28SITGSVLTLRR358 pKa = 11.84NSSAAGGFFLAVTSATANAKK378 pKa = 9.93PYY380 pKa = 10.84ALEE383 pKa = 4.37KK384 pKa = 10.52SLKK387 pKa = 10.45LGATVRR393 pKa = 11.84DD394 pKa = 4.0GLFSPACVGALCSRR408 pKa = 11.84APGLVGVVVDD418 pKa = 3.8NEE420 pKa = 4.45YY421 pKa = 10.73IAMQTVLVRR430 pKa = 11.84LDD432 pKa = 3.78PEE434 pKa = 4.9DD435 pKa = 4.24PLVLYY440 pKa = 10.76DD441 pKa = 3.84RR442 pKa = 11.84DD443 pKa = 3.64PYY445 pKa = 11.14RR446 pKa = 11.84LYY448 pKa = 10.74EE449 pKa = 4.19YY450 pKa = 10.98VWDD453 pKa = 3.96LCGVMGWRR461 pKa = 11.84IEE463 pKa = 4.03AAAGYY468 pKa = 10.73AMEE471 pKa = 5.06VYY473 pKa = 10.71SGDD476 pKa = 3.38TRR478 pKa = 11.84LGDD481 pKa = 3.31VAVRR485 pKa = 11.84YY486 pKa = 8.63GAAVGPRR493 pKa = 11.84WLRR496 pKa = 11.84LLTLAAIEE504 pKa = 4.09PRR506 pKa = 11.84KK507 pKa = 10.24SRR509 pKa = 11.84WSPEE513 pKa = 3.61LLLDD517 pKa = 3.83YY518 pKa = 10.41GASGLGRR525 pKa = 11.84YY526 pKa = 8.07LLRR529 pKa = 11.84EE530 pKa = 4.15YY531 pKa = 10.64ILAGRR536 pKa = 11.84FAGFKK541 pKa = 10.14SLMMHH546 pKa = 5.65TEE548 pKa = 4.54GYY550 pKa = 9.29FAEE553 pKa = 4.41AAKK556 pKa = 10.59SIASPKK562 pKa = 9.44PNAPAAKK569 pKa = 9.95LPVSYY574 pKa = 11.06VIDD577 pKa = 3.61TEE579 pKa = 4.23YY580 pKa = 10.28LTRR583 pKa = 11.84KK584 pKa = 9.9LPDD587 pKa = 3.32GSIEE591 pKa = 4.16RR592 pKa = 11.84FVYY595 pKa = 10.75ALGLAKK601 pKa = 9.95FYY603 pKa = 10.97AGNYY607 pKa = 8.2VGSALVVDD615 pKa = 4.59QSPEE619 pKa = 3.96LEE621 pKa = 4.77QFIQDD626 pKa = 3.86NEE628 pKa = 4.28HH629 pKa = 6.54LAGTKK634 pKa = 9.33PMRR637 pKa = 11.84MLASIRR643 pKa = 11.84EE644 pKa = 4.25EE645 pKa = 3.72IAPRR649 pKa = 11.84ASLCNGNPSALLAEE663 pKa = 4.41LRR665 pKa = 11.84IAARR669 pKa = 11.84SPEE672 pKa = 3.65VRR674 pKa = 11.84LYY676 pKa = 11.36AKK678 pKa = 10.46GADD681 pKa = 3.69AEE683 pKa = 4.41RR684 pKa = 11.84EE685 pKa = 4.14LLSSKK690 pKa = 10.11LARR693 pKa = 11.84GTRR696 pKa = 11.84LFRR699 pKa = 11.84RR700 pKa = 11.84ANLAAPLRR708 pKa = 11.84VPLHH712 pKa = 6.18EE713 pKa = 5.35LGAMVPRR720 pKa = 11.84YY721 pKa = 9.85EE722 pKa = 4.04EE723 pKa = 3.94LAAKK727 pKa = 9.95HH728 pKa = 6.49DD729 pKa = 4.39WDD731 pKa = 4.86PSHH734 pKa = 6.81NPAKK738 pKa = 10.21EE739 pKa = 3.88CVLFGIEE746 pKa = 4.71AGLGDD751 pKa = 4.53ALPTEE756 pKa = 4.5RR757 pKa = 11.84AVGLDD762 pKa = 3.65DD763 pKa = 5.14MYY765 pKa = 11.58TLLPQMSTQVVV776 pKa = 3.27

Molecular weight: 83.92 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2Z5X7J9|A0A2Z5X7J9_9VIRU Uncharacterized protein OS=Alternaria alternata chrysovirus 1 OX=2066695 PE=4 SV=1
MM1 pKa = 7.05MFWNKK6 pKa = 9.24RR7 pKa = 11.84QAAPGVMGSEE17 pKa = 4.07RR18 pKa = 11.84MKK20 pKa = 10.42VAGLIRR26 pKa = 11.84PATAVSTVPWWFLDD40 pKa = 3.63TPLRR44 pKa = 11.84TEE46 pKa = 4.32ASALCLLLTIWTHH59 pKa = 6.68LRR61 pKa = 11.84GACLAICDD69 pKa = 4.17RR70 pKa = 11.84RR71 pKa = 11.84RR72 pKa = 11.84SSDD75 pKa = 3.1QCSEE79 pKa = 3.73CRR81 pKa = 11.84ACVARR86 pKa = 11.84DD87 pKa = 3.19WRR89 pKa = 11.84HH90 pKa = 4.15TAWRR94 pKa = 11.84HH95 pKa = 4.95LRR97 pKa = 11.84WSLVAAGRR105 pKa = 11.84PDD107 pKa = 3.4ALRR110 pKa = 11.84GVNFGG115 pKa = 3.81

Molecular weight: 13.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3553

115

1117

710.6

77.29

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.468 ± 0.262

1.407 ± 0.219

4.7 ± 0.339

6.445 ± 0.552

2.533 ± 0.422

7.543 ± 0.613

2.336 ± 0.313

2.252 ± 0.054

3.096 ± 0.457

10.667 ± 0.698

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.589 ± 0.108

2.083 ± 0.262

5.545 ± 0.817

3.8 ± 0.405

7.149 ± 0.303

7.656 ± 0.433

4.869 ± 0.314

8.19 ± 0.317

1.52 ± 0.261

3.152 ± 0.419
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski