Bos taurus papillomavirus 23

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Xipapillomavirus; Xipapillomavirus 1

Average proteome isoelectric point is 6.01

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L6KTE6|A0A1L6KTE6_BPV3 Protein E7 OS=Bos taurus papillomavirus 23 OX=2758958 GN=E7 PE=3 SV=1
MM1 pKa = 7.65KK2 pKa = 10.33GQDD5 pKa = 3.22VTLQGIAVEE14 pKa = 4.27LKK16 pKa = 10.45EE17 pKa = 4.22VVSPINLACDD27 pKa = 3.47EE28 pKa = 4.64EE29 pKa = 5.44IEE31 pKa = 4.31TEE33 pKa = 4.36EE34 pKa = 4.12VDD36 pKa = 4.41GPAPYY41 pKa = 10.23AVEE44 pKa = 4.01AVCYY48 pKa = 10.5VCEE51 pKa = 4.0QPLRR55 pKa = 11.84LALVADD61 pKa = 4.3SEE63 pKa = 5.14GILQFHH69 pKa = 6.92HH70 pKa = 7.21LLLEE74 pKa = 4.18NLNLLCASCSRR85 pKa = 11.84EE86 pKa = 4.02VFCNRR91 pKa = 11.84RR92 pKa = 11.84PQRR95 pKa = 11.84NGSS98 pKa = 3.34

Molecular weight: 10.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L6KTE3|A0A1L6KTE3_BPV3 Major capsid protein L1 OS=Bos taurus papillomavirus 23 OX=2758958 GN=L1 PE=3 SV=1
MM1 pKa = 7.79EE2 pKa = 4.97NLQARR7 pKa = 11.84FDD9 pKa = 3.93AVQGQLLEE17 pKa = 4.75IYY19 pKa = 10.15EE20 pKa = 4.16QDD22 pKa = 3.81TNDD25 pKa = 3.62LAVQVTYY32 pKa = 7.74WTLVRR37 pKa = 11.84QEE39 pKa = 3.8QALYY43 pKa = 10.66YY44 pKa = 9.43YY45 pKa = 10.77ARR47 pKa = 11.84QQGITRR53 pKa = 11.84LGLYY57 pKa = 7.98QVPPTRR63 pKa = 11.84VSEE66 pKa = 4.42KK67 pKa = 9.86KK68 pKa = 10.65AKK70 pKa = 10.2DD71 pKa = 3.76AIKK74 pKa = 8.32MTLFLQSLQKK84 pKa = 10.63SEE86 pKa = 4.03FAKK89 pKa = 10.79LSWSLTEE96 pKa = 3.91TSLEE100 pKa = 4.08RR101 pKa = 11.84FLAAPEE107 pKa = 3.93NTFKK111 pKa = 11.01KK112 pKa = 9.98GGQHH116 pKa = 4.2VTVIYY121 pKa = 10.14DD122 pKa = 3.7ANAYY126 pKa = 10.24NAMEE130 pKa = 3.96YY131 pKa = 9.3TLWGEE136 pKa = 3.91IFHH139 pKa = 7.37VDD141 pKa = 4.84EE142 pKa = 4.42TDD144 pKa = 3.05TWHH147 pKa = 7.23KK148 pKa = 10.76SYY150 pKa = 11.63SDD152 pKa = 3.24VDD154 pKa = 3.59YY155 pKa = 11.59DD156 pKa = 4.01GIYY159 pKa = 8.93YY160 pKa = 10.06TDD162 pKa = 3.33VQGNKK167 pKa = 8.55VYY169 pKa = 10.79YY170 pKa = 11.06VNFSDD175 pKa = 5.27DD176 pKa = 3.35AKK178 pKa = 10.63LYY180 pKa = 11.06SKK182 pKa = 10.19MGLWEE187 pKa = 3.75VRR189 pKa = 11.84YY190 pKa = 10.0QNTVLSPPVTSSVPAGSPRR209 pKa = 11.84GRR211 pKa = 11.84HH212 pKa = 5.19GPQTGSSTSGHH223 pKa = 5.65KK224 pKa = 9.39TSLHH228 pKa = 5.47TRR230 pKa = 11.84SQSSEE235 pKa = 3.65SDD237 pKa = 3.32SRR239 pKa = 11.84DD240 pKa = 2.92SRR242 pKa = 11.84GRR244 pKa = 11.84SRR246 pKa = 11.84SSSSSRR252 pKa = 11.84TRR254 pKa = 11.84SRR256 pKa = 11.84SRR258 pKa = 11.84SRR260 pKa = 11.84SRR262 pKa = 11.84SPSGSHH268 pKa = 4.24TRR270 pKa = 11.84EE271 pKa = 3.72RR272 pKa = 11.84TPQLQTGRR280 pKa = 11.84PPGGGRR286 pKa = 11.84GGRR289 pKa = 11.84RR290 pKa = 11.84TGQQRR295 pKa = 11.84DD296 pKa = 3.42RR297 pKa = 11.84RR298 pKa = 11.84RR299 pKa = 11.84PSPPSPGAVGTRR311 pKa = 11.84LRR313 pKa = 11.84TPEE316 pKa = 3.78RR317 pKa = 11.84KK318 pKa = 9.72AKK320 pKa = 9.94GRR322 pKa = 11.84LVQLIEE328 pKa = 4.2EE329 pKa = 4.49ALDD332 pKa = 3.83PPVLLLQGGANTLKK346 pKa = 10.43SFRR349 pKa = 11.84RR350 pKa = 11.84RR351 pKa = 11.84TSKK354 pKa = 10.5SYY356 pKa = 9.4PHH358 pKa = 7.36KK359 pKa = 8.32FTCMSTCWTWASKK372 pKa = 9.22TCTVKK377 pKa = 10.45SGHH380 pKa = 6.37RR381 pKa = 11.84MLIAFQNSEE390 pKa = 3.69QRR392 pKa = 11.84TSFLSTVRR400 pKa = 11.84LPKK403 pKa = 10.63GVTCVKK409 pKa = 10.57GAFDD413 pKa = 3.92SLL415 pKa = 3.89

Molecular weight: 46.79 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

2311

98

612

385.2

43.21

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.798 ± 0.641

1.774 ± 0.503

6.015 ± 0.476

6.447 ± 0.647

4.543 ± 0.501

7.183 ± 0.77

2.207 ± 0.124

4.587 ± 0.707

4.89 ± 0.571

8.481 ± 0.728

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.688 ± 0.245

4.587 ± 0.665

6.664 ± 1.123

4.587 ± 0.534

6.577 ± 0.932

8.005 ± 1.095

6.188 ± 0.782

5.452 ± 0.766

1.341 ± 0.201

2.986 ± 0.359
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski