Dragonfly larvae associated circular virus-4

Taxonomy: Viruses; unclassified viruses; unclassified DNA viruses; unclassified ssDNA viruses

Average proteome isoelectric point is 8.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|W5U2Q0|W5U2Q0_9VIRU Putative capsid protein OS=Dragonfly larvae associated circular virus-4 OX=1454025 PE=4 SV=1
MM1 pKa = 7.41GLLRR5 pKa = 11.84VYY7 pKa = 11.04YY8 pKa = 10.14SGQQARR14 pKa = 11.84RR15 pKa = 11.84LVILAVVWPMVGTTQRR31 pKa = 11.84SRR33 pKa = 11.84GWVFTINNYY42 pKa = 9.24NEE44 pKa = 3.69WDD46 pKa = 3.76FVNISKK52 pKa = 10.88LEE54 pKa = 3.95EE55 pKa = 3.63KK56 pKa = 9.9AQYY59 pKa = 9.9YY60 pKa = 10.08IYY62 pKa = 10.5GKK64 pKa = 10.18EE65 pKa = 4.0RR66 pKa = 11.84GEE68 pKa = 4.16EE69 pKa = 4.33GTPHH73 pKa = 6.15LQGFAYY79 pKa = 9.59FKK81 pKa = 10.79QRR83 pKa = 11.84ISFNGIRR90 pKa = 11.84DD91 pKa = 3.44ILTRR95 pKa = 11.84AHH97 pKa = 6.82VEE99 pKa = 3.61IQRR102 pKa = 11.84GFNAQAIDD110 pKa = 3.65YY111 pKa = 7.88CKK113 pKa = 10.67KK114 pKa = 10.3EE115 pKa = 4.12GEE117 pKa = 4.11FTEE120 pKa = 4.03WGEE123 pKa = 4.03PSRR126 pKa = 11.84GPAGQKK132 pKa = 10.41DD133 pKa = 3.16KK134 pKa = 11.08WKK136 pKa = 10.84DD137 pKa = 3.43VLQLARR143 pKa = 11.84QGKK146 pKa = 6.44VQEE149 pKa = 3.97IEE151 pKa = 3.71EE152 pKa = 4.42RR153 pKa = 11.84YY154 pKa = 8.38PAIFLRR160 pKa = 11.84YY161 pKa = 8.2FQKK164 pKa = 10.69LCGFYY169 pKa = 10.42RR170 pKa = 11.84PEE172 pKa = 3.84HH173 pKa = 6.33SIILEE178 pKa = 4.05NFTNEE183 pKa = 3.8WWWGPTGTGKK193 pKa = 10.34FKK195 pKa = 10.94KK196 pKa = 10.75LNDD199 pKa = 4.79DD200 pKa = 3.67YY201 pKa = 11.21PDD203 pKa = 4.43PYY205 pKa = 10.81EE206 pKa = 5.29KK207 pKa = 10.81SLDD210 pKa = 3.83PWWDD214 pKa = 2.9NYY216 pKa = 8.62QRR218 pKa = 11.84EE219 pKa = 4.44EE220 pKa = 3.77IVAIEE225 pKa = 4.06EE226 pKa = 4.0FEE228 pKa = 4.24PRR230 pKa = 11.84CKK232 pKa = 10.28INSFLLKK239 pKa = 9.96RR240 pKa = 11.84WADD243 pKa = 3.87RR244 pKa = 11.84YY245 pKa = 10.21PFRR248 pKa = 11.84CEE250 pKa = 3.5VKK252 pKa = 10.51GAFLSKK258 pKa = 10.34LRR260 pKa = 11.84PLKK263 pKa = 10.55IIVISNYY270 pKa = 9.75QLDD273 pKa = 3.75EE274 pKa = 4.42CFPNSKK280 pKa = 10.59DD281 pKa = 3.48LDD283 pKa = 3.79PLKK286 pKa = 10.81RR287 pKa = 11.84RR288 pKa = 11.84FKK290 pKa = 10.35EE291 pKa = 3.4IHH293 pKa = 6.05FPP295 pKa = 3.97

Molecular weight: 35.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|W5U2Q0|W5U2Q0_9VIRU Putative capsid protein OS=Dragonfly larvae associated circular virus-4 OX=1454025 PE=4 SV=1
MM1 pKa = 6.82YY2 pKa = 10.24GKK4 pKa = 10.17RR5 pKa = 11.84KK6 pKa = 7.12YY7 pKa = 10.78AKK9 pKa = 9.09YY10 pKa = 10.37ASAFAFRR17 pKa = 11.84RR18 pKa = 11.84NMRR21 pKa = 11.84TRR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84YY26 pKa = 8.61GAPGDD31 pKa = 3.8PSMTSIGNISPTGRR45 pKa = 11.84SIARR49 pKa = 11.84ANRR52 pKa = 11.84SNIGRR57 pKa = 11.84TLTGTTRR64 pKa = 11.84SRR66 pKa = 11.84YY67 pKa = 9.71NSGQGVTQQHH77 pKa = 6.14DD78 pKa = 3.32VRR80 pKa = 11.84LIYY83 pKa = 10.3AKK85 pKa = 10.52KK86 pKa = 10.43RR87 pKa = 11.84MPNYY91 pKa = 9.66KK92 pKa = 9.7KK93 pKa = 10.5KK94 pKa = 8.51PWRR97 pKa = 11.84RR98 pKa = 11.84FVKK101 pKa = 10.14KK102 pKa = 8.76VHH104 pKa = 5.98AVSEE108 pKa = 4.21KK109 pKa = 10.99DD110 pKa = 3.22LGSRR114 pKa = 11.84TALFSNTITYY124 pKa = 10.77NNTVDD129 pKa = 4.94GADD132 pKa = 3.28EE133 pKa = 4.42CLTIGLYY140 pKa = 9.81PLQSTDD146 pKa = 2.59PWLNDD151 pKa = 3.15LNTITSLEE159 pKa = 4.15NQGNPTAAAGGTVDD173 pKa = 4.08PTTKK177 pKa = 10.46FIFQSGVLDD186 pKa = 3.41LTIRR190 pKa = 11.84NATTQTGQLNPDD202 pKa = 3.65QFNAAATQEE211 pKa = 3.7IDD213 pKa = 3.49IYY215 pKa = 11.03EE216 pKa = 4.19IMCRR220 pKa = 11.84ADD222 pKa = 3.84FMQVSGGNKK231 pKa = 9.26INLSQCFEE239 pKa = 4.37EE240 pKa = 5.91GSVITRR246 pKa = 11.84NIANAPGDD254 pKa = 3.52IKK256 pKa = 10.61IANRR260 pKa = 11.84GATPFDD266 pKa = 3.83LPAALSRR273 pKa = 11.84YY274 pKa = 8.13GMKK277 pKa = 9.94IIKK280 pKa = 7.49KK281 pKa = 7.63TKK283 pKa = 8.73YY284 pKa = 9.06FVPGGGTITYY294 pKa = 9.12QIRR297 pKa = 11.84DD298 pKa = 3.64PKK300 pKa = 10.69RR301 pKa = 11.84RR302 pKa = 11.84VSSFRR307 pKa = 11.84DD308 pKa = 3.38LNVEE312 pKa = 3.83GGVNKK317 pKa = 10.2VGWTKK322 pKa = 11.01YY323 pKa = 10.64LYY325 pKa = 10.33INAKK329 pKa = 9.41VIPGFLLGTGPASFVQRR346 pKa = 11.84MQVGVTRR353 pKa = 11.84KK354 pKa = 9.96YY355 pKa = 8.0MYY357 pKa = 10.27KK358 pKa = 9.92VEE360 pKa = 4.35GFNEE364 pKa = 4.13SRR366 pKa = 11.84DD367 pKa = 3.74SYY369 pKa = 10.82STLNSTISAPAA380 pKa = 3.55

Molecular weight: 42.12 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

675

295

380

337.5

38.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.222 ± 1.137

1.185 ± 0.319

4.593 ± 0.096

5.333 ± 2.18

5.037 ± 0.879

8.0 ± 0.764

0.889 ± 0.293

6.667 ± 0.071

6.963 ± 0.522

6.37 ± 0.681

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.63 ± 0.596

5.778 ± 0.859

5.037 ± 0.242

4.444 ± 0.401

7.852 ± 0.035

5.481 ± 1.098

6.519 ± 2.172

4.889 ± 0.302

2.074 ± 1.036

5.037 ± 0.242
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski