Sanguibacteroides justesenii

Taxonomy: cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides

Average proteome isoelectric point is 6.64

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2587 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C3NCV7|A0A0C3NCV7_9PORP Uncharacterized protein OS=Sanguibacteroides justesenii OX=1547597 GN=BA92_11030 PE=4 SV=1
MM1 pKa = 7.57EE2 pKa = 4.96ATTLSAARR10 pKa = 11.84VYY12 pKa = 10.74VGTYY16 pKa = 9.3GKK18 pKa = 10.57YY19 pKa = 9.55NAGSLFGEE27 pKa = 4.2WLDD30 pKa = 4.65LSDD33 pKa = 4.74YY34 pKa = 10.89SDD36 pKa = 3.83KK37 pKa = 11.69EE38 pKa = 4.08EE39 pKa = 5.23FYY41 pKa = 10.83DD42 pKa = 4.63ACRR45 pKa = 11.84EE46 pKa = 4.06LHH48 pKa = 6.7KK49 pKa = 11.06DD50 pKa = 3.35EE51 pKa = 4.97EE52 pKa = 4.59DD53 pKa = 3.7AEE55 pKa = 5.3FMFQDD60 pKa = 3.7WEE62 pKa = 4.34NVPEE66 pKa = 3.97NLIGEE71 pKa = 4.47SWLSEE76 pKa = 3.86NFFALRR82 pKa = 11.84DD83 pKa = 3.79AVEE86 pKa = 4.52DD87 pKa = 4.18LGDD90 pKa = 3.76TEE92 pKa = 4.54QEE94 pKa = 5.05AFFVWCNYY102 pKa = 9.32KK103 pKa = 10.32SHH105 pKa = 7.73DD106 pKa = 4.59LGEE109 pKa = 4.33EE110 pKa = 3.98DD111 pKa = 5.6ADD113 pKa = 4.0DD114 pKa = 3.91LVRR117 pKa = 11.84DD118 pKa = 4.71FRR120 pKa = 11.84DD121 pKa = 3.81EE122 pKa = 4.08YY123 pKa = 10.55QGQYY127 pKa = 11.06DD128 pKa = 3.94DD129 pKa = 5.56EE130 pKa = 5.07EE131 pKa = 5.7DD132 pKa = 3.22FAYY135 pKa = 10.08EE136 pKa = 4.43IIEE139 pKa = 4.11EE140 pKa = 4.66CYY142 pKa = 10.66DD143 pKa = 3.52LPEE146 pKa = 4.02FAKK149 pKa = 10.18TYY151 pKa = 10.62FDD153 pKa = 3.75YY154 pKa = 11.44EE155 pKa = 4.0KK156 pKa = 10.43FARR159 pKa = 11.84DD160 pKa = 5.04LFMCDD165 pKa = 2.56YY166 pKa = 10.58WMDD169 pKa = 3.26EE170 pKa = 4.02GFVFRR175 pKa = 11.84AAA177 pKa = 3.78

Molecular weight: 21.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C3N9K5|A0A0C3N9K5_9PORP YhcH/YjgK/YiaL family protein OS=Sanguibacteroides justesenii OX=1547597 GN=BA92_14290 PE=4 SV=1
MM1 pKa = 7.67IGRR4 pKa = 11.84IFILDD9 pKa = 4.04GKK11 pKa = 9.86VLDD14 pKa = 4.02YY15 pKa = 11.6GRR17 pKa = 11.84FALLLHH23 pKa = 6.71SYY25 pKa = 10.55RR26 pKa = 11.84RR27 pKa = 11.84MKK29 pKa = 10.37RR30 pKa = 11.84ICALLSVDD38 pKa = 3.63VLILGRR44 pKa = 11.84YY45 pKa = 9.07IIGKK49 pKa = 9.17RR50 pKa = 11.84RR51 pKa = 11.84NLCLDD56 pKa = 3.14YY57 pKa = 10.75RR58 pKa = 11.84RR59 pKa = 11.84SKK61 pKa = 10.92AGSNNEE67 pKa = 3.77

Molecular weight: 7.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2587

0

2587

944104

58

2245

364.9

41.37

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.413 ± 0.047

1.116 ± 0.018

5.293 ± 0.031

6.919 ± 0.047

4.871 ± 0.035

6.8 ± 0.038

1.735 ± 0.019

7.541 ± 0.037

6.931 ± 0.044

9.438 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.648 ± 0.022

4.871 ± 0.038

3.677 ± 0.023

3.133 ± 0.027

4.986 ± 0.036

6.002 ± 0.034

5.313 ± 0.031

6.746 ± 0.036

1.149 ± 0.015

4.421 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski