Arthrobacter psychrolactophilus

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Arthrobacter

Average proteome isoelectric point is 6.12

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3412 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2V5IM65|A0A2V5IM65_9MICC N-acetyltransferase OS=Arthrobacter psychrolactophilus OX=92442 GN=CVS30_16880 PE=4 SV=1
MM1 pKa = 7.65TDD3 pKa = 3.17LRR5 pKa = 11.84SVGMLVAVLTLGLTSCAADD24 pKa = 3.28SASEE28 pKa = 4.14VTAVTEE34 pKa = 4.02EE35 pKa = 3.99TAAFALLPPAGIPDD49 pKa = 3.77YY50 pKa = 10.73QLGGSYY56 pKa = 10.73VPIADD61 pKa = 3.51VEE63 pKa = 4.37IVVRR67 pKa = 11.84DD68 pKa = 3.82RR69 pKa = 11.84LSTPDD74 pKa = 3.35PGRR77 pKa = 11.84YY78 pKa = 8.94SICYY82 pKa = 9.22INGFQTQPAEE92 pKa = 4.14LEE94 pKa = 4.03LWPEE98 pKa = 3.89NTLLTDD104 pKa = 3.66EE105 pKa = 5.42SGLVMDD111 pKa = 5.91PDD113 pKa = 3.89WPDD116 pKa = 3.0EE117 pKa = 4.06ALLDD121 pKa = 3.64TSTNEE126 pKa = 3.57KK127 pKa = 9.96RR128 pKa = 11.84VQILAVLKK136 pKa = 10.05PWIQNCATAGYY147 pKa = 10.12AAVEE151 pKa = 3.98FDD153 pKa = 4.33NLDD156 pKa = 3.29SYY158 pKa = 11.42TRR160 pKa = 11.84TDD162 pKa = 3.37GALTKK167 pKa = 10.53ADD169 pKa = 3.96NLEE172 pKa = 4.15LATDD176 pKa = 4.23LVAFTHH182 pKa = 6.44AKK184 pKa = 9.81GLAAGQKK191 pKa = 9.43NAAEE195 pKa = 4.59DD196 pKa = 3.58AAEE199 pKa = 4.34LQSQASFDD207 pKa = 3.77FAVSEE212 pKa = 4.1EE213 pKa = 4.01CAAYY217 pKa = 10.02DD218 pKa = 3.58EE219 pKa = 5.15CSLYY223 pKa = 10.37TGVYY227 pKa = 8.66RR228 pKa = 11.84EE229 pKa = 3.82QVIDD233 pKa = 4.75IEE235 pKa = 4.6YY236 pKa = 9.79TDD238 pKa = 3.44QLPRR242 pKa = 11.84SFASMCADD250 pKa = 3.14AGVPSSMILRR260 pKa = 11.84DD261 pKa = 3.66RR262 pKa = 11.84DD263 pKa = 3.67LVTPAEE269 pKa = 4.49DD270 pKa = 4.48GYY272 pKa = 11.37HH273 pKa = 6.62FEE275 pKa = 4.47RR276 pKa = 11.84CTT278 pKa = 3.35

Molecular weight: 30.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2V5IR90|A0A2V5IR90_9MICC Rhamnulokinase OS=Arthrobacter psychrolactophilus OX=92442 GN=CVS30_06960 PE=4 SV=1
MM1 pKa = 7.28GSVVKK6 pKa = 10.44KK7 pKa = 9.48RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.32RR11 pKa = 11.84MSKK14 pKa = 9.94KK15 pKa = 9.5KK16 pKa = 9.79HH17 pKa = 5.45RR18 pKa = 11.84KK19 pKa = 6.15QLRR22 pKa = 11.84KK23 pKa = 7.92TRR25 pKa = 11.84HH26 pKa = 3.43QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3412

0

3412

1124869

32

2033

329.7

35.34

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.696 ± 0.058

0.599 ± 0.011

5.361 ± 0.037

5.602 ± 0.039

3.326 ± 0.026

8.582 ± 0.033

2.096 ± 0.018

4.842 ± 0.033

3.074 ± 0.03

10.409 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.188 ± 0.018

2.762 ± 0.022

5.11 ± 0.029

3.206 ± 0.024

5.769 ± 0.036

6.426 ± 0.034

6.155 ± 0.043

8.26 ± 0.036

1.462 ± 0.02

2.076 ± 0.019
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski