Dialister sp. CAG:486

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae; Dialister; environmental samples

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1926 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|R6A8G7|R6A8G7_9FIRM Uncharacterized protein OS=Dialister sp. CAG:486 OX=1262870 GN=BN678_01231 PE=3 SV=1
MM1 pKa = 7.31TSASVRR7 pKa = 11.84TDD9 pKa = 3.68FYY11 pKa = 10.73QTFNVEE17 pKa = 4.61GFFSTKK23 pKa = 7.58VTFDD27 pKa = 4.31FIISEE32 pKa = 4.35YY33 pKa = 11.0AADD36 pKa = 3.44LCYY39 pKa = 10.29IIFRR43 pKa = 11.84QISDD47 pKa = 3.51ADD49 pKa = 3.59VSINSCFAA57 pKa = 4.03

Molecular weight: 6.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|R6AUQ8|R6AUQ8_9FIRM Signal peptidase I OS=Dialister sp. CAG:486 OX=1262870 GN=BN678_00201 PE=3 SV=1
MM1 pKa = 7.7AKK3 pKa = 7.99MTFQPNNHH11 pKa = 5.63WRR13 pKa = 11.84KK14 pKa = 6.87QTHH17 pKa = 5.61GFRR20 pKa = 11.84ARR22 pKa = 11.84MKK24 pKa = 8.64TKK26 pKa = 10.33AGRR29 pKa = 11.84IVLKK33 pKa = 10.36RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84AKK38 pKa = 9.89GRR40 pKa = 11.84KK41 pKa = 8.67VLSAA45 pKa = 4.05

Molecular weight: 5.35 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1926

0

1926

572162

29

2613

297.1

32.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.071 ± 0.06

1.251 ± 0.023

5.677 ± 0.047

6.929 ± 0.066

4.02 ± 0.044

7.664 ± 0.06

2.281 ± 0.026

6.637 ± 0.049

6.36 ± 0.048

9.374 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.268 ± 0.025

3.257 ± 0.047

3.91 ± 0.04

2.94 ± 0.033

5.018 ± 0.045

5.731 ± 0.041

5.333 ± 0.04

6.777 ± 0.049

1.036 ± 0.022

3.462 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski