Zahedan rhabdovirus

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Rhabdoviridae; Alpharhabdovirinae; Zarhavirus; Zahedan zarhavirus

Average proteome isoelectric point is 6.37

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0R6CHI1|A0A0R6CHI1_9RHAB Putative matrix protein OS=Zahedan rhabdovirus OX=1620507 GN=M PE=4 SV=1
MM1 pKa = 7.62SKK3 pKa = 10.34RR4 pKa = 11.84FRR6 pKa = 11.84VPSYY10 pKa = 10.29DD11 pKa = 3.39PSRR14 pKa = 11.84MVEE17 pKa = 3.99VAKK20 pKa = 10.72AADD23 pKa = 3.29NAYY26 pKa = 9.79EE27 pKa = 4.13NEE29 pKa = 4.0VEE31 pKa = 4.19KK32 pKa = 11.32DD33 pKa = 3.04KK34 pKa = 11.14DD35 pKa = 3.75IPPLTQALSAITLTRR50 pKa = 11.84EE51 pKa = 3.52EE52 pKa = 4.28EE53 pKa = 3.98ARR55 pKa = 11.84LGDD58 pKa = 4.32DD59 pKa = 4.59SYY61 pKa = 12.1LSDD64 pKa = 4.09SDD66 pKa = 5.09LDD68 pKa = 4.62RR69 pKa = 11.84SDD71 pKa = 5.07KK72 pKa = 11.28DD73 pKa = 4.0DD74 pKa = 5.25DD75 pKa = 4.18EE76 pKa = 4.82STPSSCSSHH85 pKa = 6.73RR86 pKa = 11.84FADD89 pKa = 3.76SEE91 pKa = 4.3GAKK94 pKa = 10.03AQFYY98 pKa = 10.84RR99 pKa = 11.84KK100 pKa = 9.42INFDD104 pKa = 3.37RR105 pKa = 11.84GIEE108 pKa = 3.85YY109 pKa = 9.81HH110 pKa = 6.85IPEE113 pKa = 5.69KK114 pKa = 10.24ITTPQDD120 pKa = 3.94AIDD123 pKa = 4.7DD124 pKa = 4.24LLSYY128 pKa = 9.83MEE130 pKa = 5.07DD131 pKa = 2.74MGMIDD136 pKa = 3.91SYY138 pKa = 11.48RR139 pKa = 11.84IDD141 pKa = 3.25FRR143 pKa = 11.84NRR145 pKa = 11.84RR146 pKa = 11.84KK147 pKa = 10.29VSINPRR153 pKa = 11.84STIPVRR159 pKa = 11.84DD160 pKa = 4.29EE161 pKa = 3.67IPEE164 pKa = 3.99EE165 pKa = 4.49RR166 pKa = 11.84FTPPPIKK173 pKa = 10.04MIVQDD178 pKa = 4.29PPKK181 pKa = 10.46ADD183 pKa = 3.04TGAIAKK189 pKa = 7.49STPKK193 pKa = 9.44STPKK197 pKa = 9.97KK198 pKa = 8.98VKK200 pKa = 9.72AKK202 pKa = 10.1KK203 pKa = 10.18VSLPSSGKK211 pKa = 10.19LPVYY215 pKa = 10.2QYY217 pKa = 9.54ITIYY221 pKa = 10.44GKK223 pKa = 10.79KK224 pKa = 10.13LDD226 pKa = 3.88IDD228 pKa = 4.21LNLYY232 pKa = 10.58CGGCDD237 pKa = 4.43LTDD240 pKa = 4.24FDD242 pKa = 6.31DD243 pKa = 3.93KK244 pKa = 11.52KK245 pKa = 10.21KK246 pKa = 9.58WYY248 pKa = 8.78YY249 pKa = 10.44HH250 pKa = 7.07AICSHH255 pKa = 6.77KK256 pKa = 10.46IKK258 pKa = 10.49GIKK261 pKa = 9.62LISIDD266 pKa = 3.73MNN268 pKa = 3.85

Molecular weight: 30.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0R6CHI1|A0A0R6CHI1_9RHAB Putative matrix protein OS=Zahedan rhabdovirus OX=1620507 GN=M PE=4 SV=1
MM1 pKa = 7.55NVITWTKK8 pKa = 10.42GKK10 pKa = 10.32VSQAISKK17 pKa = 10.15RR18 pKa = 11.84GKK20 pKa = 10.41KK21 pKa = 9.78EE22 pKa = 4.21DD23 pKa = 3.84GDD25 pKa = 4.52DD26 pKa = 3.7GAKK29 pKa = 9.91IPSYY33 pKa = 10.94DD34 pKa = 4.12LTPSAPPDD42 pKa = 3.58DD43 pKa = 4.96GYY45 pKa = 11.24QYY47 pKa = 10.22RR48 pKa = 11.84TINVEE53 pKa = 3.82AEE55 pKa = 4.07VDD57 pKa = 3.7VSVCLDD63 pKa = 3.2KK64 pKa = 11.54FEE66 pKa = 4.67TRR68 pKa = 11.84MEE70 pKa = 4.86AIVAPLINLHH80 pKa = 6.09MDD82 pKa = 3.28YY83 pKa = 10.56KK84 pKa = 11.44GEE86 pKa = 3.87GRR88 pKa = 11.84YY89 pKa = 10.2KK90 pKa = 10.61NIWLPLVMVAVFGLKK105 pKa = 10.29LGQRR109 pKa = 11.84SRR111 pKa = 11.84DD112 pKa = 3.35NTVYY116 pKa = 10.57KK117 pKa = 10.67VQFGKK122 pKa = 10.73GLKK125 pKa = 10.23LKK127 pKa = 10.2IKK129 pKa = 9.69SRR131 pKa = 11.84RR132 pKa = 11.84PFEE135 pKa = 4.01MDD137 pKa = 4.88RR138 pKa = 11.84KK139 pKa = 9.97ISWNQFQKK147 pKa = 10.8YY148 pKa = 8.8LCNGLTSEE156 pKa = 4.03WSIRR160 pKa = 11.84CQLEE164 pKa = 4.07YY165 pKa = 10.96TLVDD169 pKa = 3.26YY170 pKa = 11.52SMKK173 pKa = 10.69HH174 pKa = 4.35VDD176 pKa = 5.19KK177 pKa = 11.1EE178 pKa = 3.87LLQYY182 pKa = 10.26LRR184 pKa = 11.84AMRR187 pKa = 11.84VRR189 pKa = 11.84FEE191 pKa = 3.86VDD193 pKa = 2.71EE194 pKa = 4.27NQNLVLIMDD203 pKa = 4.49YY204 pKa = 11.46

Molecular weight: 23.78 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3603

204

2170

720.6

82.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.079 ± 0.785

1.665 ± 0.446

6.384 ± 0.705

6.495 ± 0.236

4.191 ± 0.282

5.828 ± 0.28

2.609 ± 0.382

6.245 ± 0.282

5.773 ± 0.74

9.77 ± 0.987

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.526 ± 0.391

4.33 ± 0.314

4.746 ± 0.495

3.053 ± 0.324

6.328 ± 0.349

6.273 ± 0.578

6.245 ± 0.332

6.273 ± 0.433

1.971 ± 0.341

4.219 ± 0.203
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski