Oxalobacteraceae bacterium CAVE-383

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; unclassified Oxalobacteraceae

Average proteome isoelectric point is 6.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3601 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    

Protein with the lowest isoelectric point:
>tr|A0A4V1QP88|A0A4V1QP88_9BURK Uncharacterized protein OS=Oxalobacteraceae bacterium CAVE-383 OX=2478672 GN=D9O50_16250 PE=4 SV=1
MM1 pKa = 7.99PDD3 pKa = 3.09ANGDD7 pKa = 3.65FVAPVAKK14 pKa = 10.26SAIEE18 pKa = 3.88KK19 pKa = 9.2VQVVDD24 pKa = 3.26VDD26 pKa = 3.73MVLQLKK32 pKa = 10.46DD33 pKa = 3.42GTSMVLAGGAISAMDD48 pKa = 3.94ASHH51 pKa = 6.73TEE53 pKa = 4.04VKK55 pKa = 10.66FSDD58 pKa = 3.75GLQGLSKK65 pKa = 10.86LFDD68 pKa = 3.95LVGTIAIPKK77 pKa = 9.21LDD79 pKa = 5.54PILSSLQGHH88 pKa = 6.81PNSEE92 pKa = 4.23GQGAGANANQPAATEE107 pKa = 4.38SAGLTASVTSQIVNQLTQIVQANAQSVTIKK137 pKa = 10.05TVDD140 pKa = 3.46PSAKK144 pKa = 10.04VAVLSQSTKK153 pKa = 10.14TGDD156 pKa = 3.31VDD158 pKa = 4.27SQPLQHH164 pKa = 6.68TEE166 pKa = 3.75PPIPPEE172 pKa = 4.05RR173 pKa = 11.84PGVIPQEE180 pKa = 4.48HH181 pKa = 7.27IIGPDD186 pKa = 3.41APAMALSLVNLTTITQIGNVLYY208 pKa = 10.84GSGGTPASATDD219 pKa = 3.67AGNNAQFASQVINAPANATEE239 pKa = 3.89IHH241 pKa = 6.62AGANIPTNDD250 pKa = 3.85FIKK253 pKa = 10.95VVDD256 pKa = 3.52ITLTGNGIAQSIEE269 pKa = 4.05IKK271 pKa = 10.46GVPAGMSIANGTDD284 pKa = 2.73LGGGVWSIPVVSGQRR299 pKa = 11.84DD300 pKa = 3.3YY301 pKa = 11.54AIQIEE306 pKa = 5.01YY307 pKa = 7.51TTVPANPQTPIHH319 pKa = 5.6QQFSMEE325 pKa = 4.16FDD327 pKa = 3.5VTMTTADD334 pKa = 4.13GIVNLSQVKK343 pKa = 9.12QFVVKK348 pKa = 10.48DD349 pKa = 3.75VNSANDD355 pKa = 3.48LTFIDD360 pKa = 4.33STTGEE365 pKa = 4.33SVYY368 pKa = 10.87VLPAQGNSHH377 pKa = 6.54IVHH380 pKa = 6.81AGDD383 pKa = 4.06AGVTIIGSNANDD395 pKa = 3.67FLFGGAGADD404 pKa = 3.93TINGGTGNTYY414 pKa = 10.9LEE416 pKa = 4.67GGGGADD422 pKa = 3.76HH423 pKa = 7.24LNGGVGGINTAGYY436 pKa = 7.45TLSATGVTVDD446 pKa = 4.39LVAGTGTGGDD456 pKa = 3.64AQGDD460 pKa = 4.14TLTNIQNVIGSTHH473 pKa = 6.43NDD475 pKa = 3.12IIVASAAANNINGGGHH491 pKa = 6.9DD492 pKa = 4.75SIGGDD497 pKa = 3.41TVSYY501 pKa = 10.05AGSGTGVIIDD511 pKa = 4.34LAAGTGTGGNAAGDD525 pKa = 4.1KK526 pKa = 9.93LTGIQNVIGSDD537 pKa = 3.47HH538 pKa = 7.18NDD540 pKa = 3.01TFFGSSEE547 pKa = 3.84GNAFDD552 pKa = 5.82GGLHH556 pKa = 6.82DD557 pKa = 5.95LNGANTVSYY566 pKa = 11.49ANDD569 pKa = 3.56TSGTGAIVNLATGHH583 pKa = 6.25GSGAAAGDD591 pKa = 3.93SYY593 pKa = 12.19VNIQNIIGTAFNDD606 pKa = 3.84TFIDD610 pKa = 4.04GAGANRR616 pKa = 11.84YY617 pKa = 9.71DD618 pKa = 3.92GGVGGNDD625 pKa = 2.9TVDD628 pKa = 3.44YY629 pKa = 10.15SNAGAGVTVNFVTGHH644 pKa = 5.87GAGDD648 pKa = 3.42IAEE651 pKa = 4.72GDD653 pKa = 3.71TFVNVQNVIGSNFDD667 pKa = 3.73DD668 pKa = 4.35VFTAGIDD675 pKa = 3.59SKK677 pKa = 11.45NFNGGAGFDD686 pKa = 3.58TVRR689 pKa = 11.84YY690 pKa = 9.62DD691 pKa = 3.3SAASGIIIDD700 pKa = 5.32AINNVGRR707 pKa = 11.84GAAAGNTYY715 pKa = 9.99TGIEE719 pKa = 4.12AFVGGGSDD727 pKa = 4.4DD728 pKa = 3.81MFIASADD735 pKa = 3.53ANSFNGGAAGSDD747 pKa = 3.17TVDD750 pKa = 3.4YY751 pKa = 10.71SNSNAAVTVDD761 pKa = 3.59LFFTRR766 pKa = 11.84GQGTSGGYY774 pKa = 9.59AQGDD778 pKa = 3.9VLVNIANVIGSAGDD792 pKa = 3.93DD793 pKa = 3.38LFLANSVQNSFEE805 pKa = 4.25GGGGNNTVSYY815 pKa = 9.08EE816 pKa = 4.11HH817 pKa = 7.01SSSADD822 pKa = 3.29STGVIVDD829 pKa = 4.43LSATDD834 pKa = 4.09GSGTSGNYY842 pKa = 10.37ALGDD846 pKa = 3.56KK847 pKa = 10.41FSNIQNVIGSAFNDD861 pKa = 3.61TFVASSVANVFTGGGGIDD879 pKa = 3.3TVSYY883 pKa = 10.93AKK885 pKa = 9.38STSADD890 pKa = 2.89GVTGVTVDD898 pKa = 3.98LSTVDD903 pKa = 3.54GLGGAGHH910 pKa = 6.28GHH912 pKa = 6.3GNYY915 pKa = 10.31AEE917 pKa = 5.05GDD919 pKa = 3.87TIINVQNAIGSIYY932 pKa = 10.42NDD934 pKa = 3.62TFIGGAVANTFTGGGGSDD952 pKa = 3.24TVSYY956 pKa = 10.73AGSTAVTVDD965 pKa = 3.53LVNGVGVGGNAEE977 pKa = 3.76GDD979 pKa = 3.59KK980 pKa = 10.83YY981 pKa = 11.43INVQNVIGGDD991 pKa = 3.6ADD993 pKa = 3.73DD994 pKa = 4.96TIIDD998 pKa = 3.7NLAANTIDD1006 pKa = 3.67GGTVSLHH1013 pKa = 5.73NRR1015 pKa = 11.84VSYY1018 pKa = 11.03ANSVSSPGVAAGVTVDD1034 pKa = 3.87LTATDD1039 pKa = 3.9GTGTSGGYY1047 pKa = 8.32ATGDD1051 pKa = 3.44KK1052 pKa = 10.67LSNIQDD1058 pKa = 3.95LTGSAADD1065 pKa = 3.74DD1066 pKa = 3.78TFVASLAANNLDD1078 pKa = 4.01GGASTAASHH1087 pKa = 6.53NRR1089 pKa = 11.84VSYY1092 pKa = 10.64DD1093 pKa = 3.05KK1094 pKa = 11.33SVDD1097 pKa = 3.36GSGAAAGVTVDD1108 pKa = 4.14LVNGVGTGGYY1118 pKa = 9.85AQGDD1122 pKa = 4.23TYY1124 pKa = 12.03ANIQDD1129 pKa = 3.94VTGSKK1134 pKa = 10.71ADD1136 pKa = 3.85DD1137 pKa = 4.89LIIDD1141 pKa = 4.02SAAANTIDD1149 pKa = 3.89GGTGSLHH1156 pKa = 5.46NTVSYY1161 pKa = 11.04ANSVTSTGAAAGVTINLNLADD1182 pKa = 4.09GSGNSGGYY1190 pKa = 10.1AVGDD1194 pKa = 3.6KK1195 pKa = 10.84LSNIQNLVGSQADD1208 pKa = 3.68DD1209 pKa = 3.69TFVASAAANFLDD1221 pKa = 4.29GGTGSLHH1228 pKa = 6.2NRR1230 pKa = 11.84VDD1232 pKa = 3.65YY1233 pKa = 10.82SASVDD1238 pKa = 3.44AGNAAAAVTVDD1249 pKa = 3.51LSGNTGTGGYY1259 pKa = 9.86AQGDD1263 pKa = 4.23TYY1265 pKa = 12.03ANIQDD1270 pKa = 3.99VTGSGADD1277 pKa = 3.58DD1278 pKa = 4.44LFIASTAANNFDD1290 pKa = 4.1GGVSTAASHH1299 pKa = 6.26NRR1301 pKa = 11.84VSYY1304 pKa = 9.14SQSGTGVVVDD1314 pKa = 5.11LSVTNGNGTSGGAAGDD1330 pKa = 3.81TFVNIQDD1337 pKa = 3.54ITGSNQNDD1345 pKa = 3.68TFVASTAANNFDD1357 pKa = 4.2GGTGSDD1363 pKa = 3.23TVSYY1367 pKa = 11.16ARR1369 pKa = 11.84VTGGVGVTVDD1379 pKa = 3.79LTAGGALTGGAAAGDD1394 pKa = 4.25TYY1396 pKa = 11.4TSIEE1400 pKa = 4.1NVIGSANNDD1409 pKa = 3.42LFIDD1413 pKa = 4.27GGGAVPNAYY1422 pKa = 9.04TGGGGVDD1429 pKa = 3.98RR1430 pKa = 11.84ISYY1433 pKa = 9.98DD1434 pKa = 3.13NSAAGVNVDD1443 pKa = 5.32FGTGLNMGTGTGSYY1457 pKa = 10.27AQGDD1461 pKa = 4.55TYY1463 pKa = 11.68VGIQNVTGSKK1473 pKa = 10.41FDD1475 pKa = 4.8DD1476 pKa = 3.83NFTASTTVSAATANAFDD1493 pKa = 4.71GNTGTLHH1500 pKa = 6.6NRR1502 pKa = 11.84VLYY1505 pKa = 9.57TGTGTGVTVNLSNIIVNGVAAGSGGGGAAGDD1536 pKa = 4.07TYY1538 pKa = 11.97ANIQDD1543 pKa = 3.64ITGTTSDD1550 pKa = 3.94DD1551 pKa = 4.06RR1552 pKa = 11.84IIASAAANNIDD1563 pKa = 3.84GGTGSLHH1570 pKa = 6.23NRR1572 pKa = 11.84VDD1574 pKa = 3.61YY1575 pKa = 8.84TASVDD1580 pKa = 3.98AGNAPAGVTVDD1591 pKa = 3.81LSGNTGTGGYY1601 pKa = 9.86AQGDD1605 pKa = 4.23TYY1607 pKa = 12.03ANIQDD1612 pKa = 3.99VTGSGADD1619 pKa = 3.54DD1620 pKa = 4.48LFIASAAANNFDD1632 pKa = 4.37GGVSTAASHH1641 pKa = 6.35NRR1643 pKa = 11.84VSYY1646 pKa = 9.8LQSATGVVVDD1656 pKa = 5.88LSVTDD1661 pKa = 3.86GTGTSGGAAGDD1672 pKa = 3.81TFVNIQDD1679 pKa = 3.54ITGSNQNDD1687 pKa = 3.68TFVASTAANNFDD1699 pKa = 4.2GGTGSDD1705 pKa = 3.23TVSYY1709 pKa = 11.16ARR1711 pKa = 11.84VTGGVGVTVDD1721 pKa = 3.79LTAGGALTGGAAAGDD1736 pKa = 4.25TYY1738 pKa = 11.4TSIEE1742 pKa = 4.1NVIGSANNDD1751 pKa = 3.42LFIDD1755 pKa = 4.27GGGAVPNAYY1764 pKa = 9.04TGGGGVDD1771 pKa = 3.98RR1772 pKa = 11.84ISYY1775 pKa = 9.98DD1776 pKa = 3.13NSAAGVNVDD1785 pKa = 5.32FGTGLNMGTGTGSYY1799 pKa = 10.27AQGDD1803 pKa = 4.55TYY1805 pKa = 11.68VGIQNVTGSKK1815 pKa = 10.41FDD1817 pKa = 4.8DD1818 pKa = 3.83NFTASTTVSAATANAFDD1835 pKa = 4.71GNTGTLHH1842 pKa = 6.6NRR1844 pKa = 11.84VLYY1847 pKa = 9.57TGTGTGVTVNLSNIIVNGVAAGSGGGGAAGDD1878 pKa = 4.07TYY1880 pKa = 11.97ANIQDD1885 pKa = 3.63ITGTASDD1892 pKa = 3.94DD1893 pKa = 4.08TIVASSAANNIDD1905 pKa = 3.59GGASTAASHH1914 pKa = 6.51NRR1916 pKa = 11.84VDD1918 pKa = 3.81YY1919 pKa = 10.74SASVDD1924 pKa = 3.41AGNVAVGVTVDD1935 pKa = 4.22LLNSVGTGGYY1945 pKa = 9.91AQGDD1949 pKa = 4.23TYY1951 pKa = 12.03ANIQDD1956 pKa = 3.87VTGSGAADD1964 pKa = 3.44TFVASAAANKK1974 pKa = 9.8FDD1976 pKa = 4.37GGAGSDD1982 pKa = 3.46TVDD1985 pKa = 3.43YY1986 pKa = 9.08STSTAIIVNLSALTQNTLAAGTGSGGLAAGDD2017 pKa = 3.55TYY2019 pKa = 11.62TNIEE2023 pKa = 4.31NIKK2026 pKa = 10.44GGAGNDD2032 pKa = 3.23LFYY2035 pKa = 11.24AGTAANAFTGGGGIDD2050 pKa = 3.37TVSYY2054 pKa = 10.7VSSTNGVTASLIANAVGSGGDD2075 pKa = 3.34AAGDD2079 pKa = 3.73TFSGITNLTGSAQNDD2094 pKa = 4.13TLTGLAAGGSTLNGGAGSDD2113 pKa = 3.72TLNATGDD2120 pKa = 3.55NNIFIGGAGGDD2131 pKa = 3.56TMTGNGGLNNTADD2144 pKa = 3.99YY2145 pKa = 8.94TGSGAVVVDD2154 pKa = 4.7LFFTDD2159 pKa = 3.84GTGTSGGDD2167 pKa = 3.18ATGDD2171 pKa = 3.54KK2172 pKa = 10.91LSGIQNVKK2180 pKa = 10.54GSGGNDD2186 pKa = 2.75TFFANSVANVFTGNGGTDD2204 pKa = 3.22TVSYY2208 pKa = 10.21SHH2210 pKa = 6.41STTTVIASLLAGVGGTSGDD2229 pKa = 3.71ATGDD2233 pKa = 3.45TYY2235 pKa = 11.84NAITNLTGGSGDD2247 pKa = 3.71DD2248 pKa = 3.55TLTGLLAGGSTLVGNAGNDD2267 pKa = 3.21RR2268 pKa = 11.84LIATGGNNVLMGGAGADD2285 pKa = 3.39NMSATGANNTASYY2298 pKa = 10.77AGSTNGNIIVDD2309 pKa = 4.08LTKK2312 pKa = 10.46TDD2314 pKa = 3.48GTGTSGGDD2322 pKa = 3.13AAGDD2326 pKa = 3.51ILSGIQNVIGGLGDD2340 pKa = 3.87DD2341 pKa = 5.44KK2342 pKa = 11.46FILDD2346 pKa = 4.01HH2347 pKa = 6.38NANIIDD2353 pKa = 4.39GGNGSNTVSYY2363 pKa = 10.38EE2364 pKa = 3.75HH2365 pKa = 6.86EE2366 pKa = 4.04TTINVTVDD2374 pKa = 3.23LSGTGIANGDD2384 pKa = 4.08GLFGAQDD2391 pKa = 3.71TLTNIQNAIGGGGNDD2406 pKa = 3.55IFLAGNAHH2414 pKa = 6.11NFFDD2418 pKa = 4.65GGGGVDD2424 pKa = 3.42TVSYY2428 pKa = 11.06ANNNGAHH2435 pKa = 6.39GAAIAANTAGVTVDD2449 pKa = 4.01FHH2451 pKa = 8.68GNIGSGNWAAGDD2463 pKa = 3.57TYY2465 pKa = 11.41TNIEE2469 pKa = 4.18NVIGTTGNDD2478 pKa = 3.28TFIDD2482 pKa = 3.89AGDD2485 pKa = 4.12GVHH2488 pKa = 7.04NIYY2491 pKa = 10.97NGGANGAGSNDD2502 pKa = 3.25TVSYY2506 pKa = 10.51QFSATGGALTLSIDD2520 pKa = 3.68GTHH2523 pKa = 6.83ANAGNAAGDD2532 pKa = 3.79VFTNIANLTGSDD2544 pKa = 3.65TVNSEE2549 pKa = 3.55LWGDD2553 pKa = 3.65GNANILTAMGSTNTNILHH2571 pKa = 6.24GNGGGAGTDD2580 pKa = 3.47VLDD2583 pKa = 4.56GRR2585 pKa = 11.84LGGHH2589 pKa = 5.58NTLIAGDD2596 pKa = 3.93TGSTTVDD2603 pKa = 2.95INASADD2609 pKa = 3.51PNHH2612 pKa = 7.02AGGSILGTNIDD2623 pKa = 4.02QIVGSTTGAVTVKK2636 pKa = 9.84MFNLTTALDD2645 pKa = 3.52ISSFSATATVGGPKK2659 pKa = 9.71VSHH2662 pKa = 6.31ITTLDD2667 pKa = 3.38LSGDD2671 pKa = 3.79GVGTQISISANDD2683 pKa = 3.79VIALGNNHH2691 pKa = 5.69QLSVRR2696 pKa = 11.84MDD2698 pKa = 3.69GNDD2701 pKa = 3.85SINLVLQAGEE2711 pKa = 4.02HH2712 pKa = 6.03SVLFGNGDD2720 pKa = 3.66YY2721 pKa = 11.57AFFDD2725 pKa = 3.99ANNVEE2730 pKa = 4.59LARR2733 pKa = 11.84IHH2735 pKa = 6.33QLTT2738 pKa = 3.51

Molecular weight:
267.76 kDa
Isoelectric point according different methods:






Protein with the highest isoelectric point:
>tr|A0A4V1QQH5|A0A4V1QQH5_9BURK Extracellular solute-binding protein OS=Oxalobacteraceae bacterium CAVE-383 OX=2478672 GN=D9O50_02575 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.36RR3 pKa = 11.84TYY5 pKa = 9.97QPSVVRR11 pKa = 11.84RR12 pKa = 11.84KK13 pKa = 8.57RR14 pKa = 11.84THH16 pKa = 5.79GFRR19 pKa = 11.84ARR21 pKa = 11.84MATRR25 pKa = 11.84GGRR28 pKa = 11.84AVINARR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.58GRR39 pKa = 11.84KK40 pKa = 8.75RR41 pKa = 11.84LAVV44 pKa = 3.41

Molecular weight:
5.12 kDa
Isoelectric point according different methods:






Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3601

0

3601

1228013

29

6384

341.0

37.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.389 ± 0.059

0.885 ± 0.014

5.499 ± 0.039

5.149 ± 0.034

3.701 ± 0.024

8.015 ± 0.053

2.179 ± 0.019

5.544 ± 0.029

3.948 ± 0.036

10.449 ± 0.055

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.68 ± 0.022

3.246 ± 0.042

4.915 ± 0.04

3.948 ± 0.027

6.178 ± 0.052

5.638 ± 0.032

5.008 ± 0.059

6.916 ± 0.033

1.228 ± 0.015

2.484 ± 0.018

Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski