>tr|B6VDX7|B6VDX7_THCOV 3C-like proteinase OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=orf1ab PE=3 SV=1 MAMNIAKRSPIVLPQIQPPPLQLFISVAAAEEGHPKDLTHLGDYNLITTKAIPGVPVLNP KTSLTEFEQLFGAQPVLRALRNLVSESRSAEWHNSKQAFVVKAQQLVFSDHVLRAMIRHC PARVSALASLALFNRIVKIDAEDLRNIALDVAAEVTYGGSAGVALVDCKTITLTHKDAYI TLTNECFGVPFTSTLLAQAKVTNGAMAYADYLFYPGATLRMVNGKALPIASKPLVAIIQK VPLLSEDVNLLPDYTQAPNIQVEGAEVSVNGINYLKTTDTPPLYYPRVKGGVLNVALKQQ GTADKKLSVVFHAKPDDVLLAFIQLQDFLNRSSGGFIDVNTEVYEVAPNVNVSIGVSKPG DVVVATAEDYLKCFDDPDVSGLYKVFQTESWAKVQQTFRKLRVKTSAVVQEFLKLLSLIA EKFKSLSTIVDAIVSQLQNLTLDVVARVQTLQISYKAGRLVVDAVGVISKIVQPFCDFVT PFLHKVAGFATYAFGTNMLLCTSRGVFVLQQSAAKIVNKLRYVFTVSPEYAVETTTNKVI YEDSLHPVDDKPSRALEVVDVVVGDTVLQMATDGNAYFPTDGNYASLPAFKAGSDELNIS FICDIFDDDTNAMINETLAGYELNQLVAPRTLTPRDIANLVVNTLVDAITDHYPEKCIDL PEDYQVFSSYDDLPLTNHHIPKHLSLYVQAMESDDGDEDVIIEDDDYQCDTGDDDGGVIP QCWDIPNIDTLLVKLQKNKPVSVEVVPNDTRDTTVTMNISTPDDVAIVEQITESAAIQAE SVQSEPGDQVDQQPVEEINVEQMVQEESEVSTSNDDESTQPRVIDTLGEDELLFIPQCDF PEHRPLKAYIYDRKLKNDVIEQSPITSDADSELKSVDSDVIYEEAVCDDDTIITDSTENG EEEQLPATIVNQPLTIDNNIPTVALKQPSPTRVELVVGDLSTIKFDNSVLVNPANPQLTN GGGAARAIAELAGPEYQAHCNKIAPINGVVTTEAYNAKTLGVACILHVVPPKGTDHDVQE QLYNAYRSILTEPAHYVIPLLGAGIYGCNPVHSLDAFKKACPPDIGRVTLVTKDVNHLQL WDALNRVVVRTTKDFDQITTQALTPQGVLDANLFDGDKFVQEPQPDCVYLAVDDVVQTKA KDLGLSLSQYCSYLKMCHHKWATVRTNGILHLKQKDNNCFISAAINLFQVTHYKLRPVID ELYQEYVNGNPNRLVAWIYASINQNIGEMGCPQQVTSLLVSNANSKFFGTVHCCKTYFTH DGVIANVKDFDLLQPKVYCMRCESWTTFTPEQVEGVVVLGNTIGPAPTHAICFGNAHCWY TNGRKAINGYDINANVVVVYHKFQMMKTQVVVSAPLSTSNNFDVLKVQDIPEDSPLNSDP PAVEAAVKSVTKCEVHDNPTYLDLLDVWVRKPKHILVKSWSVIGKPLFKTGKVILLSGKY LLKIYNYLCSIGVIDTTAKLSIGLACKCVKRVLPSTLTITRTVKGLFYSFRTIIFACAPF LLLPAVASILSSSYQLGVYLYAKTGTPCAAYMNEDHTDYQSFCAGDLTCLVCFNGMDSLH LYKHLHVSQKVYETFDYTPYALALVLLLANTTLVICTMLCVFLFNIYKFTVPYYGVVTLD YQNTLTFVFVVYYMWCVIRFFRHLARGCKTPTCSICSKLRISPTIIVDTIVQGRKYPSIV HTNAGFKICPEHNFYCKNCTGENPDTFIPTEAIESLSRVTKLSVKPTAPAYLLARDVECQ TDAIVARATHGGQSMVCISKYSDVRTVDALLKPTPLFSYTPDVIIAADFDNAGSLKTAKE LAVVLSMDLKRTIFIIDQSYSMPVDNYTEVVSRMEKYYTFQKITPTGDIFMDVKTATHGQ ATDSAINAAILAVQKGLDFTIDDPNHILPHYAFEFSNLAVEDQSILIETGCAKGKLKGTN VGVILAANLVERLSQSAIRVISNAASRNGVTCSVTPSTMVLRGNIATQPLQRIKAGSAAK HSITTFVVCLIALYALAYGMATLAVYVYQPIYPTVMSDIPTSGFYVIRDGVLDNIRSTDT CFSNKFVSFDAYLQADYVNSHNCPVVVGVADVATKSIPGIPAGVIHRDSGILHIYEQSLY DRLQRQSMVQEALGLKTRALFNIGYRTVVGYTRSDVVVGASYMHSPSLFNAKCTYLEYQD KRHLYCFDKVDREHKLYADVIPHVEYKAVDFNGELVPFKIPEQLLLYPHIVRYTSNYYCR MGHCFKTNPGVCVSFTDEFPYSENVQPGVYCADSGFQLLTNFIIGTVTGVHIFTSTAALL GSTCFILLCVFAILAFQRLFKEYTTFVLHTLIIAGVNIIGIALVYKFTALAIVYYAIYLY CILTFVPIKRNIALFYFAVVLVPHISNMQLLAIAVVFVCYLCYSYVRVVSKTAGKFSSFL GASKATFVIDNDKYVMLRDLAGSEYDSYLASYNKYKYFSGTASDKDYDKVCMAFLAKALS SFRDGGGSQLYTPPQLAVVQSIKTKLQAGIKILLHPSGVVERCMVSVTYNGSALNGIWLN NVVYCPRHVFGKFKGEQWQHIASIADCRDFCVVCPTQGIQLTVQSVKMVGAILQLTVHTN NTATPDYEFVRLTPGSSMTIACAYDGVVRNVYHVVLQTNNLIYASFLNGACGSVGYTLKG KTLCLHYMHHLEFNNQTHGGTDLHGVFYGPYVDEEIAQQQTTFQYYTDNVVAQLYAHLLT VDASPRWLAQAEVSETDFNAWASNNSFANFPCEPANMSYILGLAQTSRVSIGRVLNTIIQ LTLNRNGSLIMGKPDFECDWTPEMVYNQAPITLQSGIVQRTSMWLLHFLFNTLLAVLAML HVLPTELYPLGLPVVTVFSSIITVTVKHSVVFTTTFLLPAFLMFVAKAPTLWIPNTYLRS LYEWVFGLTMSERLTCYTVGVYIVVYCLIALNYTLRCVRYRATSYVSIFMQCVQYAYVVH IVYRLLTQAWTDKLLFTAFSLLTSHPLLAVCGWWLAGKFPVPFLLPDLAIQIVAYIVIGY ILCVRFGLLWILNKFTTLPIGTYNYMVSIEQLKYMMAIKMGPPRNVFEVLVANLRLLGLG GNRNIAISTVQNKILDAKAAAVVVANLLDKAGVTNKHSVCKKIVKLHNDTLKATTYEEAE LSLVKLLTHIIEFLPTDQVDAYLADTVKVQALNQYLDHLLENKLVLQAVVDANINLDSYR IYKEADAIYKKSVDMDEPLQIQKKKLKAVNIAKAEWEREAASQRKLEKLADAAMKSMYLA ERAEDRRIKLTSGLTAMLYHMLRRLDSDRVKALFECAKQQILPIHAIVGVSNDNLKVIFN DKDSYIQYVDGNTLFYKGQRYTIVKKLSLDNAPIEGTPEEYPIVVETVREGIPQIQNNEL CLRNVFTAQAPVFDSNGKESTAKSFYVSRAGRKILVAVTSTKDDLRTVTCHTDNGKTILN LDPPMRFAHVIGGKQHVVYLYFIQNMSSLNRGTIIGHISGTTILQANGTQIEYQENASLL TYLAFAVNPKEAYLKHLADGGNPIRGCIQMIASLGPGFAVTTKPQPNEHQYSYGGASICL YCRAHIPHPGADGRCLYKGRFVQIDKDKEPISFALTHEPCNACQHWVNYDCTCGSALQSS PYLNRVTGSSGARLEPLQHGVTPDVVQRAFHVHNNVNSGIFLSTKTNCSRFKTIRDHLPL PTDKAVELYFVSKQCSQQSFEIEEKCYNLLADNIKSTPETFGVLARTEFFKFDKIPNVNR QNLTKYTLLDLAYALRHLSTSKDVIKEVLMTMCGTPEEWFDEQWYDPIENQTFYREFHKL GSILNRCVINANTFAKACADAGLVGILTPDNQDLLGQIYDFGDFIITQQGNGCVDLASYY SYLMPIMSMTHMLKCECYDSDGNDLVYDGFQYDFTEFKLSLFSKYFTYWDRPYHPNTVDC PDDRCVLHCANFNVLFAMCIPNTAFGNLCSQATVDGHKIIQTVGVHLKELGIVLNQDVTT HMSNINLNTLLRLVGDPTTIASVSDKCLDLRTPCQTLATMSSGITKQSVKPGHFNQHFYK HLLNSDILNQLGIDLRHFYYMQDGEAAITDYSYYRYNTPTMVDIKMFLFCLEVADKYLQP YEGGCLNAQSVVVNNLDKSAGYPFNKLGKARNYYDMTYVEQNQLFEYTKRNVLPTLTQMN LKYAISAKDRARTVAGVSIISTMTNRQYHQKMLKSISLARNQTIVIGTTKFYGGWDNMLR RLMDGINNPILVGWDYPKCDRSMPNMLRIAASCLLARKHTCCTQSQRFYRLANECCQVLS EVVVSGNNLYVKPGGTSSGDATTAYANSVFNILQVVSANVATFLSTSTSNHNSREIASLH RNLYEDIYRGDSNNTSVIEDFYQHLRKYFGLMILSDDGVACIDSEAAASGVVSNLDGFRD ILFYQNNVYMADSKCWTETDMNVGPHEFCSQHTVLAEHEGKPYYLPYPDVSRILGACIFV DDVNKADPVQNLERYISLAIDAYPLTKVDPVKGKVFYLLLDYIRVLAQELQDGILDTFQS MTDMSYVNNFVQEAFYAQMYEQSPTLQASGVCVVCASPTILRCGDCIRRPLLCCVCAYQH VTQTTHKRIIAINNYICSVDNCNEDNVEKLFISGTAIYCENHKPTLCIPIVANGTVFGIY RHTARGSDDIELFNELATSNFDTIEPYRKANRAPLSLMLFAAETIKALEESIKKSYATAT VKDVYDQRFIKLVWEQGKKPPPITKNHIFTGYHFNKNGKTQVGDYILTKTDGNDSYTYRG TSTYRLQTGDVLVLMAHVVTPLSAPPVLAQSTYVRKSLIPDTVGASFYVQHFKSYNEIAL QKVTTVLGPPGTGKSTFAIGLAKYYPNARICYTASSHAAIDALCEKAFKTLPVGQCSRIV PTRTTVECFQGFVVNNTTAQYIFSTINALPDIKCDIVVVDEVSMLTNYELSSVNARLVYN YIVYVGDPYQLPSPRTMLTTGQLSPADYNVVTDIMVHTGADVMLDMCYRCPKEIVETVSK LVYDNKLKAAKPNSRQCYKTIVNFGTSDIAHEGQSAYNEAQLRFALAFRRYKRWENVTFI SPYNAMNVKAAMAGFSTQTVDSSQGSEYDYVIFCVTTDSAHALNMSRLNVALTRAKIGIL VVFRQANELYNSLQFESIDPSLVGQEGVLLMTDRRSTALAKSGSTPMKVQSSEDTTQEVL PEGSSSTRLLCPLFKRCSYEYSGLHPAHALTWHDCGAEYRCDEPLAKLVGVSDGTLVSYK TLVSALGFLPSLKIETYHNMFLTKEACRTYVQSWIGIDVEAAHAVKPNVGTNLPLQIGFS TGKNFSVTPEGIWVNEFGSCTEPVPAKIPPGEQFRHLKRDMRQARPWKVVRNEIATHLAE VAPYTDHICFVTWAHQLELATMRYFVKIGTEESCFCGRRACFTNETEFTCKAHRALSVPS CDYVYNPFLIDVATWGFSGRLSTNHDEVCTYHSNAHVASADATMTVCLAIHELFRSVDWD LEFPVTPEQSQLNKACRLVQANYLNILLTTTKATVVHDIGNPKGIPTVRRAGVKYHFYDQ APIVKHVQKLKYKPEMEARFMEGLTMFWNCNVDTYPANALVCRYDTHRQKHLIGPNGSAL YINKHAFLTPEMHTYATHKLTLAPLIYYSTTDCSSEQPIVVSYRDCVTRCNTGTTICPTH ALEYQEFINAYNLMARHGFNVYIPRNVNVYNCWLSFTNLQNLENLAYNCYYKNCNAHVDG QLDVVINNNAVYAKVENNLVKLFDNRTNLPVSTAFEHYTNRHTKALPTTQLLAGLGVTAT RNFTIWVDDDTVFQHTVNVSTYTDCDPNLHVVLCDDRYGTDWSQFNQMPNAVFLTKTKVK KTVPFICTALTLNGVAIDGDELYIYYRKDNQLINFTTILTQGRVVDKFIPKTPMEKDFLE MNSEDFINSYELQGLGVEHIIYGEDNTPVIGGTHALISLVRNKFSFELVNHIYNPVQNCV VTSQNASSKEVCTLLDITLDDYINIIKSAHANFETKSKVFSVNIDCQNVKFMLWHDEQVQ TCYPIVQSLTNGYQMPSVYKTLVCDLEPCDIPNYHAYVPRVPGVVKNVLKYRQLFNYIIK KDRLAVPHNMTVLHLGAASIEGTAPGTDVIKHMLPEGTVIIDLDIREFTSDANQIIISDY RTYMPPHHIDAIFSDMYCGDDIHFFDNLIRIVKERLALGGSLFVKITEHSYSPELYALAG HFDDYQLFCTAVNASSSESFLCCFNYLGSVKENVNGHMLHAAYIRWRNEIALTPTYSPLA DNAAVVCKLKATPIISAKELEKKPILKYLVASGRLLVRPPECRELY >tr|B6VDX8|B6VDX8_THCOV Spike glycoprotein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=S PE=4 SV=1 MQRVILICFITLASAARLVDRVFDALTFPNAHQYLRDTRQIQPRWLPSAEEPKSDGKGHF TQNVHRFAFLTNGSSPVDQIIRTTQPLLLRCPQWFGYNGSGNWVLKFNFSESNYCNDGYN YNGNKVVSHIRLIGAFLASPSVDYVFTLQTTSGSTYYLNCSTSQRPVGFDAEMQRNYCYV KTANYTQFIGILPERVADVTFSREGTFYVNGFGMGSFGQLARITVDKGALATFNHSWAYF VDEADVLLNITDSQIQGIVYCDKDLYDHLRCQQSSFSLTDGFYSTAKYTTNQQRKTIFVT LPKHTYTETISILPNISNPAYPDGSTNGPALGWWVGTMNVLFNNSQTLCVNSSFFMVNIT FKCWLKPHPTKPSDEYKCIGGLPTAQVKLPDWPFAPYYSFSQLCLSSTYQVGYSTFYFQY WNQGTNKRWESKPLFYYTYQTGTQYTYVTKPVISFTDVSELSLYECVDYNIYGVIGSGII QPSNISYLNGLYYTSSAGQLLAFKNSTTFQIYTVQPCDSPGQVIVYNNSFIGAITASNQT ILNFKSRIATPTFYYHTNATSVQGNCNTAPLQFSSIGICPDGSIMQVNTTVDTLPATTII TSGNITIPLNFTISIQAEYLQIQAQHTVVDCQTYVCNGNAKCLQLLQQYSTACSNIEQSL TMSARLDNAETLAMVQTSTQGYHLSKIEQHDNQYNLTAILPNKQGGRSAIEDLLFDKVVT NGLGTVDQDYKECTKGVSLADLACAQYYSGIMVLPGVVDAEKMAMYTASLTGGMFFGGLT AASSIPFSVAVQARLNYVALQTDVLQKNQQILANSFNQAMGNITLAFSSVNDALQQTSEV IQTVANALNKIQDVVNKQGSALNHLTLQLQNNFDAISHSIADIYARLDEVEANQQVDRLI TGRLAALNAYVTQVLTQISQLKAQRQLAQEKINECVKSQSDRFGFCGNGSHLFSITQAAP NGILFLHTVLTPTDRVQVNAIAGICVSDSAFVLREPNLAFFQHDGKWLISPRRLFQPRPA TVADFVQIQSCEVTFYNTTYDELPQLIPDYVDVNQTVSDILANKTDPSLDLKLDIYNQTV LNLSAEVDELFQRAQNLTLIFKQLEQYINNINNTLVDLEWLNRVETYIKWPWWVWLLIVL AIAAFACIVITIFLCTGCCGGCFGCCGGCFGLFSKRKFDSDPTPVSFKLKEW >tr|B6VDX9|B6VDX9_THCOV Small membrane protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=E PE=4 SV=1 MVVEDWSITIPGQYVIAALVILIVCVTLLFINTCLACVKLSYKCFLGARYLVNPIIVYYS KPNPTPEEEFVKIHQFPRNNYV >tr|B6VDY0|B6VDY0_THCOV Membrane protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=M PE=4 SV=1 MSDAQEWQVIVFIIIIWALGVILQGGYATRARLIYIIKLILLWLLQPFTLVVTIWSAVDN GNNKTGAVFIISIIFAVLTFLSWLRYWYDSIRLVIKTHSAWSFSPESRLLAGINDPMGNW RCIPIDHMAPILAPVVKHGKLKLHGQELASGVTVSSVPKSMIVVSPSDTFHYTLKKTIDT DERDFAVLIYQGDRVSNAGLHSITTSDSGNARLYKYL >tr|B6VDY1|B6VDY1_THCOV Nonstructural protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=NS6 PE=4 SV=1 MCNCLYQVKALVEYSKTHGKTDVLELLDPLVKTRCFAYTLVVCINANPVAFSILPRKLLI NGEPLLIEYGNVYGKDFIIRPSLQVILEEEC >tr|B6VDY2|B6VDY2_THCOV Nucleocapsid phosphoprotein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=N PE=4 SV=1 MSAPVVPTTDASWFQVLKAQNKKAIHPQFRGDGVPLNSAIKPQENHGYWLRYNRQKPGGA AIPPSYAFYYTGTGPRGNLKFGEYPPNDSKDTSRITWVKAKGADTSIKPHVAKRNPNNPK HALLPLRFPSGDGPAAGFRVDPFNTRGRQLERAPGPRSMSMDTRPAANQPRKRDQSAPAA VRRKTQHQAPKRTLQKGKTISQVFGHRSRTGANVGSADTEKSGMADPRIMALARYVPGVQ EMLFAGHVDSQFQVNDITLTFTYSITVKENSPDYIRIKDALSTVVNQTYEPPTKPKKEKK PVEQASKNNQQKKKPAKQETAKPDNSADLEWDDAFEIKQDSSA >tr|B6VDY3|B6VDY3_THCOV Nonstructural protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=NS7a PE=4 SV=1 MAEKRTKLTYPLGGSHETYVPSSCCNSIEPCYISTMHPYQPYISESFKLILEEIAECGNT QSPHAFLYYQEPGLKIWKIHWQRGTDCGPGHCITVFQNKEKGSVNWEEQDFTSHSVFTIP LPE >tr|B6VDY4|B6VDY4_THCOV Nonstructural protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=NS7b PE=4 SV=1 MGTSQSSVSVNNQITNIHASEHSSVQTSNSNTSEIQALLQQGLPYLVILLSILLLLQSAF IIHLLRRVRRLKSRLFAAAPLLT >tr|B6VDY5|B6VDY5_THCOV Nonstructural protein OS=Thrush coronavirus HKU12 (isolate Grey-backed thrush/Hong Kong/HKU12-600/2007) OX=572290 GN=NS7c PE=4 SV=1 MFETLYYAELLGPLIDIEVLGFVTFIHYFWHYRPRRCQHVIPQESQSEGAIMQTRAGYSC TESHLDKCQCKKDTYTI