Salmon gill poxvirus

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Nucleocytoviricota; Pokkesviricetes; Chitovirales; Poxviridae; Chordopoxvirinae; Salmonpoxvirus; Salmon gillpox virus

Average proteome isoelectric point is 6.43

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 206 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0H4Y1D3|A0A0H4Y1D3_9POXV Uncharacterized protein OS=Salmon gill poxvirus OX=1680908 GN=SGPV181 PE=4 SV=1
MM1 pKa = 7.58SNHH4 pKa = 7.08LYY6 pKa = 10.74LFPDD10 pKa = 3.47YY11 pKa = 10.86TLVDD15 pKa = 4.53DD16 pKa = 4.35NTNPLVDD23 pKa = 3.92VNIVTFDD30 pKa = 3.23KK31 pKa = 10.68EE32 pKa = 4.27AYY34 pKa = 9.28SNKK37 pKa = 10.02QIVLPDD43 pKa = 3.22INFIPDD49 pKa = 3.61IMPIEE54 pKa = 4.29EE55 pKa = 4.28SVKK58 pKa = 10.3FIPLEE63 pKa = 4.33TVFSRR68 pKa = 11.84QYY70 pKa = 10.79NDD72 pKa = 4.55FISEE76 pKa = 4.27EE77 pKa = 4.15IEE79 pKa = 4.39SDD81 pKa = 3.44EE82 pKa = 5.28LDD84 pKa = 3.59YY85 pKa = 11.63DD86 pKa = 4.02SDD88 pKa = 4.08SVQYY92 pKa = 8.28EE93 pKa = 4.13TGEE96 pKa = 3.77YY97 pKa = 10.12DD98 pKa = 3.75YY99 pKa = 10.92EE100 pKa = 4.23NTVNSVGLHH109 pKa = 6.57DD110 pKa = 4.92DD111 pKa = 2.71MWMEE115 pKa = 4.4SDD117 pKa = 4.54HH118 pKa = 7.73DD119 pKa = 4.12SDD121 pKa = 5.21YY122 pKa = 11.79EE123 pKa = 4.06NDD125 pKa = 4.26CEE127 pKa = 5.45DD128 pKa = 3.74SYY130 pKa = 11.8ILQSHH135 pKa = 7.65FIHH138 pKa = 7.33

Molecular weight: 16.24 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0H4XWP4|A0A0H4XWP4_9POXV G1L metaloprotease-like protein OS=Salmon gill poxvirus OX=1680908 GN=SGPV149 PE=3 SV=1
MM1 pKa = 7.71SNRR4 pKa = 11.84KK5 pKa = 8.76HH6 pKa = 6.4DD7 pKa = 4.08RR8 pKa = 11.84PRR10 pKa = 11.84VITSWTSCVIIKK22 pKa = 9.83IRR24 pKa = 11.84YY25 pKa = 7.0QYY27 pKa = 10.53TYY29 pKa = 9.33GLVRR33 pKa = 11.84IVRR36 pKa = 11.84LFCSGLVRR44 pKa = 11.84IVRR47 pKa = 11.84IVRR50 pKa = 11.84NLSSRR55 pKa = 11.84NLSSRR60 pKa = 11.84NLSSRR65 pKa = 11.84NLSSRR70 pKa = 11.84NLSSRR75 pKa = 11.84ILSRR79 pKa = 11.84ILSRR83 pKa = 11.84NLSSRR88 pKa = 11.84NLSSRR93 pKa = 11.84NLSSRR98 pKa = 11.84NLSSRR103 pKa = 11.84NLSSXKK109 pKa = 9.9PQQ111 pKa = 3.24

Molecular weight: 12.74 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

206

0

206

75061

53

2493

364.4

41.86

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

2.896 ± 0.135

1.921 ± 0.095

6.539 ± 0.134

5.705 ± 0.128

4.925 ± 0.112

4.584 ± 0.141

2.417 ± 0.089

7.702 ± 0.181

7.992 ± 0.175

8.5 ± 0.136

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.026 ± 0.072

6.499 ± 0.172

4.109 ± 0.131

2.946 ± 0.086

3.514 ± 0.126

7.57 ± 0.144

7.181 ± 0.133

6.503 ± 0.116

1.298 ± 0.064

4.169 ± 0.096
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski