Kingella oralis ATCC 51147

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella; Kingella oralis

Average proteome isoelectric point is 7.29

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3160 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C4GFZ2|C4GFZ2_9NEIS DNA-directed RNA polymerase subunit omega OS=Kingella oralis ATCC 51147 OX=629741 GN=rpoZ PE=3 SV=1
MM1 pKa = 7.62LALTLADD8 pKa = 4.15ANDD11 pKa = 3.88FVIEE15 pKa = 4.15AEE17 pKa = 4.07LDD19 pKa = 3.43GAEE22 pKa = 4.3YY23 pKa = 10.91ALHH26 pKa = 6.41FAWNDD31 pKa = 3.33EE32 pKa = 3.85NSYY35 pKa = 9.23WALGLEE41 pKa = 4.32NADD44 pKa = 2.86GVMQFEE50 pKa = 4.96GLRR53 pKa = 11.84ICPNVDD59 pKa = 2.46ILAGLRR65 pKa = 11.84YY66 pKa = 9.71LDD68 pKa = 3.8VPQGVLFCDD77 pKa = 4.46GEE79 pKa = 4.33PDD81 pKa = 2.93RR82 pKa = 11.84MAFVDD87 pKa = 4.56EE88 pKa = 4.33RR89 pKa = 11.84AQMIYY94 pKa = 10.78AGADD98 pKa = 3.31DD99 pKa = 4.2VFVV102 pKa = 3.74

Molecular weight: 11.32 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C4GEM8|C4GEM8_9NEIS Uncharacterized protein OS=Kingella oralis ATCC 51147 OX=629741 GN=GCWU000324_00115 PE=4 SV=1
MM1 pKa = 6.97NRR3 pKa = 11.84ARR5 pKa = 11.84GRR7 pKa = 11.84FARR10 pKa = 11.84IGNGRR15 pKa = 11.84GFMPRR20 pKa = 11.84QMLPLLPITSKK31 pKa = 11.08SPAKK35 pKa = 10.05RR36 pKa = 11.84RR37 pKa = 11.84ARR39 pKa = 11.84TSPARR44 pKa = 11.84RR45 pKa = 11.84LILASQLRR53 pKa = 11.84FATQAAGG60 pKa = 3.17

Molecular weight: 6.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3160

0

3160

709645

37

2608

224.6

24.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.568 ± 0.068

1.166 ± 0.019

4.794 ± 0.037

5.311 ± 0.058

4.106 ± 0.04

7.044 ± 0.064

2.519 ± 0.03

5.696 ± 0.033

4.897 ± 0.047

10.047 ± 0.069

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.446 ± 0.026

4.189 ± 0.047

4.638 ± 0.039

5.19 ± 0.049

5.528 ± 0.043

5.337 ± 0.043

5.212 ± 0.05

6.154 ± 0.057

1.322 ± 0.022

2.837 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski