Tortoise microvirus 105

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W817|A0A4P8W817_9VIRU Replication initiation protein OS=Tortoise microvirus 105 OX=2583105 PE=4 SV=1
MM1 pKa = 6.74KK2 pKa = 10.32QIVIRR7 pKa = 11.84LIAPQVPSYY16 pKa = 11.0DD17 pKa = 3.47VTVGEE22 pKa = 4.91IIDD25 pKa = 3.94GQFAPVNDD33 pKa = 4.02INQIDD38 pKa = 4.15PKK40 pKa = 10.21LANVLIDD47 pKa = 5.57DD48 pKa = 4.24VTQSDD53 pKa = 3.75ILGGSSYY60 pKa = 10.43IRR62 pKa = 11.84SKK64 pKa = 11.13DD65 pKa = 3.47LSHH68 pKa = 7.46LLGSLYY74 pKa = 10.52ASNMISNVTMFPNFTVIDD92 pKa = 4.83LINYY96 pKa = 8.37EE97 pKa = 4.34SEE99 pKa = 4.19EE100 pKa = 4.23SS101 pKa = 3.4

Molecular weight: 11.13 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8WAB0|A0A4P8WAB0_9VIRU Uncharacterized protein OS=Tortoise microvirus 105 OX=2583105 PE=4 SV=1
MM1 pKa = 7.47ACSHH5 pKa = 7.13PIWIRR10 pKa = 11.84NRR12 pKa = 11.84RR13 pKa = 11.84YY14 pKa = 9.64YY15 pKa = 10.65DD16 pKa = 3.04KK17 pKa = 11.0KK18 pKa = 10.02NPSRR22 pKa = 11.84LGSDD26 pKa = 3.14IQQSALALRR35 pKa = 11.84PWDD38 pKa = 4.19VSRR41 pKa = 11.84QWLMVPCGHH50 pKa = 7.23CDD52 pKa = 3.18DD53 pKa = 4.21CLRR56 pKa = 11.84RR57 pKa = 11.84LRR59 pKa = 11.84NDD61 pKa = 2.4WFVRR65 pKa = 11.84LDD67 pKa = 3.87RR68 pKa = 11.84EE69 pKa = 4.07LAHH72 pKa = 6.49NKK74 pKa = 9.88SINSQAVFITITISPKK90 pKa = 9.13YY91 pKa = 8.64YY92 pKa = 10.39DD93 pKa = 3.5RR94 pKa = 11.84AFSEE98 pKa = 4.41PAWFIRR104 pKa = 11.84KK105 pKa = 7.35WLEE108 pKa = 3.76RR109 pKa = 11.84VRR111 pKa = 11.84HH112 pKa = 4.97KK113 pKa = 10.74VGHH116 pKa = 5.22SFKK119 pKa = 10.69HH120 pKa = 6.15AFFQEE125 pKa = 4.74FGSHH129 pKa = 7.28PEE131 pKa = 4.05TGSEE135 pKa = 3.99PRR137 pKa = 11.84LHH139 pKa = 6.05FHH141 pKa = 6.84GFLFGLDD148 pKa = 3.0ISYY151 pKa = 11.1DD152 pKa = 3.33RR153 pKa = 11.84LRR155 pKa = 11.84AVVGDD160 pKa = 4.83LGFIWVARR168 pKa = 11.84ATQRR172 pKa = 11.84RR173 pKa = 11.84ARR175 pKa = 11.84YY176 pKa = 5.2TVKK179 pKa = 10.85YY180 pKa = 9.67VVKK183 pKa = 10.49QINYY187 pKa = 9.97DD188 pKa = 3.53GNNPKK193 pKa = 10.01LRR195 pKa = 11.84ALLQHH200 pKa = 6.37RR201 pKa = 11.84RR202 pKa = 11.84YY203 pKa = 7.92TRR205 pKa = 11.84KK206 pKa = 9.33FVSAGLGDD214 pKa = 3.79YY215 pKa = 10.6LGNKK219 pKa = 7.4PAPSFHH225 pKa = 6.08IRR227 pKa = 11.84SWSYY231 pKa = 10.81LDD233 pKa = 3.11TSSRR237 pKa = 11.84VNYY240 pKa = 10.12DD241 pKa = 3.17YY242 pKa = 11.23AIPRR246 pKa = 11.84YY247 pKa = 8.56YY248 pKa = 10.49NRR250 pKa = 11.84HH251 pKa = 6.08LKK253 pKa = 10.63PEE255 pKa = 4.32DD256 pKa = 3.36EE257 pKa = 4.46LRR259 pKa = 11.84RR260 pKa = 11.84SVLAADD266 pKa = 4.33TYY268 pKa = 11.94ARR270 pKa = 11.84FSKK273 pKa = 10.74SPLVRR278 pKa = 11.84HH279 pKa = 5.52IVSRR283 pKa = 11.84CVNLFIPEE291 pKa = 4.02ASLSRR296 pKa = 11.84RR297 pKa = 11.84ASYY300 pKa = 8.35TWQLEE305 pKa = 3.93QMNKK309 pKa = 8.88FRR311 pKa = 11.84TAGRR315 pKa = 11.84PLPAFDD321 pKa = 4.95PPTFLTRR328 pKa = 11.84QIVLFWYY335 pKa = 10.21DD336 pKa = 3.47NFKK339 pKa = 11.26LSITT343 pKa = 3.88

Molecular weight: 40.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1666

68

601

238.0

26.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.983 ± 1.423

0.72 ± 0.383

5.882 ± 0.818

3.842 ± 0.742

4.982 ± 0.814

6.242 ± 0.747

1.861 ± 0.57

5.522 ± 1.168

3.962 ± 1.034

7.623 ± 0.527

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.921 ± 0.447

5.642 ± 0.599

4.742 ± 0.729

4.682 ± 0.775

6.423 ± 1.342

8.764 ± 0.859

6.182 ± 1.155

5.942 ± 0.457

1.861 ± 0.371

5.222 ± 0.967
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski