Amino acid dipepetide frequency for Wuhan insect virus 11

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.352AlaAla: 3.352 ± 0.951
1.006AlaCys: 1.006 ± 0.071
2.682AlaAsp: 2.682 ± 0.85
3.017AlaGlu: 3.017 ± 0.214
3.688AlaPhe: 3.688 ± 0.113
2.682AlaGly: 2.682 ± 0.404
1.341AlaHis: 1.341 ± 0.244
3.688AlaIle: 3.688 ± 1.669
4.023AlaLys: 4.023 ± 0.731
3.688AlaLeu: 3.688 ± 0.113
2.011AlaMet: 2.011 ± 0.456
3.688AlaAsn: 3.688 ± 2.115
3.017AlaPro: 3.017 ± 1.123
3.352AlaGln: 3.352 ± 0.505
3.017AlaArg: 3.017 ± 1.105
5.364AlaSer: 5.364 ± 1.699
3.352AlaThr: 3.352 ± 1.396
3.017AlaVal: 3.017 ± 0.232
0.335AlaTrp: 0.335 ± 0.273
3.352AlaTyr: 3.352 ± 0.386
0.0AlaXaa: 0.0 ± 0.0
Cys
1.006CysAla: 1.006 ± 0.071
0.0CysCys: 0.0 ± 0.0
1.341CysAsp: 1.341 ± 0.689
1.006CysGlu: 1.006 ± 0.374
1.676CysPhe: 1.676 ± 0.416
0.335CysGly: 0.335 ± 0.172
0.0CysHis: 0.0 ± 0.0
1.006CysIle: 1.006 ± 0.071
1.006CysLys: 1.006 ± 0.071
0.335CysLeu: 0.335 ± 0.172
0.67CysMet: 0.67 ± 0.345
0.335CysAsn: 0.335 ± 0.172
0.335CysPro: 0.335 ± 0.172
1.006CysGln: 1.006 ± 0.374
1.341CysArg: 1.341 ± 0.202
0.0CysSer: 0.0 ± 0.0
0.335CysThr: 0.335 ± 0.273
0.335CysVal: 0.335 ± 0.172
0.0CysTrp: 0.0 ± 0.0
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.352AspAla: 3.352 ± 1.396
0.67AspCys: 0.67 ± 0.345
4.693AspAsp: 4.693 ± 0.63
4.023AspGlu: 4.023 ± 1.177
3.017AspPhe: 3.017 ± 0.214
3.017AspGly: 3.017 ± 1.105
0.67AspHis: 0.67 ± 0.345
5.699AspIle: 5.699 ± 0.19
4.358AspLys: 4.358 ± 1.794
6.705AspLeu: 6.705 ± 0.773
0.67AspMet: 0.67 ± 0.345
2.682AspAsn: 2.682 ± 0.404
4.358AspPro: 4.358 ± 0.434
1.341AspGln: 1.341 ± 0.202
1.676AspArg: 1.676 ± 0.862
2.682AspSer: 2.682 ± 0.85
5.364AspThr: 5.364 ± 1.253
3.688AspVal: 3.688 ± 0.333
0.335AspTrp: 0.335 ± 0.172
2.347AspTyr: 2.347 ± 0.315
0.0AspXaa: 0.0 ± 0.0
Glu
5.028GluAla: 5.028 ± 1.248
1.006GluCys: 1.006 ± 0.071
3.688GluAsp: 3.688 ± 0.333
4.693GluGlu: 4.693 ± 1.521
3.352GluPhe: 3.352 ± 1.723
1.341GluGly: 1.341 ± 0.202
1.341GluHis: 1.341 ± 0.202
6.369GluIle: 6.369 ± 1.182
3.352GluLys: 3.352 ± 0.832
4.358GluLeu: 4.358 ± 0.012
1.341GluMet: 1.341 ± 0.244
3.688GluAsn: 3.688 ± 0.113
1.676GluPro: 1.676 ± 0.03
2.347GluGln: 2.347 ± 0.131
3.688GluArg: 3.688 ± 0.333
3.017GluSer: 3.017 ± 0.232
3.688GluThr: 3.688 ± 1.45
4.023GluVal: 4.023 ± 0.731
0.335GluTrp: 0.335 ± 0.172
3.352GluTyr: 3.352 ± 0.059
0.0GluXaa: 0.0 ± 0.0
Phe
1.341PheAla: 1.341 ± 0.648
0.67PheCys: 0.67 ± 0.547
2.347PheAsp: 2.347 ± 0.315
3.017PheGlu: 3.017 ± 0.66
2.011PhePhe: 2.011 ± 0.143
2.682PheGly: 2.682 ± 0.487
1.006PheHis: 1.006 ± 0.82
1.676PheIle: 1.676 ± 0.416
4.023PheLys: 4.023 ± 0.16
3.688PheLeu: 3.688 ± 1.004
1.341PheMet: 1.341 ± 0.202
5.028PheAsn: 5.028 ± 0.802
1.341PhePro: 1.341 ± 0.202
1.341PheGln: 1.341 ± 0.244
3.017PheArg: 3.017 ± 0.232
5.028PheSer: 5.028 ± 1.693
3.017PheThr: 3.017 ± 0.232
3.017PheVal: 3.017 ± 0.66
0.335PheTrp: 0.335 ± 0.172
2.011PheTyr: 2.011 ± 0.143
0.0PheXaa: 0.0 ± 0.0
Gly
3.352GlyAla: 3.352 ± 0.386
0.335GlyCys: 0.335 ± 0.172
5.364GlyAsp: 5.364 ± 1.866
2.682GlyGlu: 2.682 ± 0.487
1.676GlyPhe: 1.676 ± 0.03
2.011GlyGly: 2.011 ± 0.749
0.67GlyHis: 0.67 ± 0.101
4.358GlyIle: 4.358 ± 0.903
3.017GlyLys: 3.017 ± 0.214
2.347GlyLeu: 2.347 ± 0.761
1.006GlyMet: 1.006 ± 0.517
3.017GlyAsn: 3.017 ± 1.123
2.347GlyPro: 2.347 ± 0.131
2.011GlyGln: 2.011 ± 0.588
2.011GlyArg: 2.011 ± 0.749
1.341GlySer: 1.341 ± 0.689
4.358GlyThr: 4.358 ± 0.012
5.028GlyVal: 5.028 ± 1.871
1.341GlyTrp: 1.341 ± 1.093
1.676GlyTyr: 1.676 ± 0.862
0.0GlyXaa: 0.0 ± 0.0
His
0.67HisAla: 0.67 ± 0.547
0.0HisCys: 0.0 ± 0.0
1.676HisAsp: 1.676 ± 0.416
1.006HisGlu: 1.006 ± 0.374
2.011HisPhe: 2.011 ± 0.143
0.67HisGly: 0.67 ± 0.345
0.335HisHis: 0.335 ± 0.172
0.67HisIle: 0.67 ± 0.101
0.67HisLys: 0.67 ± 0.101
1.341HisLeu: 1.341 ± 0.689
1.341HisMet: 1.341 ± 0.244
0.335HisAsn: 0.335 ± 0.172
1.341HisPro: 1.341 ± 0.648
1.006HisGln: 1.006 ± 0.374
0.0HisArg: 0.0 ± 0.0
1.006HisSer: 1.006 ± 0.517
1.341HisThr: 1.341 ± 0.648
2.347HisVal: 2.347 ± 0.315
0.335HisTrp: 0.335 ± 0.172
0.335HisTyr: 0.335 ± 0.172
0.0HisXaa: 0.0 ± 0.0
Ile
4.358IleAla: 4.358 ± 0.879
0.335IleCys: 0.335 ± 0.273
5.028IleAsp: 5.028 ± 0.802
3.688IleGlu: 3.688 ± 1.004
3.017IlePhe: 3.017 ± 0.232
2.682IleGly: 2.682 ± 0.85
1.676IleHis: 1.676 ± 0.475
6.369IleIle: 6.369 ± 0.737
4.693IleLys: 4.693 ± 0.63
5.364IleLeu: 5.364 ± 0.529
0.67IleMet: 0.67 ± 0.101
4.693IleAsn: 4.693 ± 0.707
5.699IlePro: 5.699 ± 1.527
3.017IleGln: 3.017 ± 1.123
2.347IleArg: 2.347 ± 0.761
6.705IleSer: 6.705 ± 0.564
4.358IleThr: 4.358 ± 0.903
3.688IleVal: 3.688 ± 0.333
1.006IleTrp: 1.006 ± 0.071
3.017IleTyr: 3.017 ± 0.66
0.0IleXaa: 0.0 ± 0.0
Lys
4.023LysAla: 4.023 ± 0.16
0.67LysCys: 0.67 ± 0.345
4.023LysAsp: 4.023 ± 0.731
4.023LysGlu: 4.023 ± 1.177
3.352LysPhe: 3.352 ± 0.059
2.347LysGly: 2.347 ± 1.206
1.341LysHis: 1.341 ± 0.689
4.023LysIle: 4.023 ± 1.177
2.682LysLys: 2.682 ± 1.379
6.705LysLeu: 6.705 ± 0.327
1.676LysMet: 1.676 ± 0.416
4.023LysAsn: 4.023 ± 0.16
4.023LysPro: 4.023 ± 0.285
2.011LysGln: 2.011 ± 0.749
2.347LysArg: 2.347 ± 1.206
3.017LysSer: 3.017 ± 0.214
5.364LysThr: 5.364 ± 1.866
7.375LysVal: 7.375 ± 1.563
0.67LysTrp: 0.67 ± 0.101
4.358LysTyr: 4.358 ± 0.434
0.0LysXaa: 0.0 ± 0.0
Leu
3.352LeuAla: 3.352 ± 0.505
1.676LeuCys: 1.676 ± 0.862
4.693LeuAsp: 4.693 ± 0.261
8.046LeuGlu: 8.046 ± 0.321
2.682LeuPhe: 2.682 ± 0.404
4.358LeuGly: 4.358 ± 1.349
1.676LeuHis: 1.676 ± 0.416
3.352LeuIle: 3.352 ± 0.832
7.375LeuLys: 7.375 ± 2.454
6.369LeuLeu: 6.369 ± 1.046
1.676LeuMet: 1.676 ± 0.171
4.693LeuAsn: 4.693 ± 0.261
2.682LeuPro: 2.682 ± 0.042
2.682LeuGln: 2.682 ± 0.404
3.352LeuArg: 3.352 ± 0.505
6.705LeuSer: 6.705 ± 0.327
5.699LeuThr: 5.699 ± 0.19
5.028LeuVal: 5.028 ± 0.802
0.335LeuTrp: 0.335 ± 0.172
1.676LeuTyr: 1.676 ± 0.03
0.0LeuXaa: 0.0 ± 0.0
Met
2.011MetAla: 2.011 ± 0.303
0.335MetCys: 0.335 ± 0.172
2.347MetAsp: 2.347 ± 0.576
2.011MetGlu: 2.011 ± 0.143
0.67MetPhe: 0.67 ± 0.345
1.341MetGly: 1.341 ± 0.244
0.335MetHis: 0.335 ± 0.172
0.67MetIle: 0.67 ± 0.345
1.676MetLys: 1.676 ± 0.416
1.341MetLeu: 1.341 ± 0.689
0.67MetMet: 0.67 ± 0.101
1.341MetAsn: 1.341 ± 0.244
1.341MetPro: 1.341 ± 0.202
3.017MetGln: 3.017 ± 0.232
1.341MetArg: 1.341 ± 0.689
1.676MetSer: 1.676 ± 0.03
1.676MetThr: 1.676 ± 0.416
1.341MetVal: 1.341 ± 0.244
0.335MetTrp: 0.335 ± 0.172
1.006MetTyr: 1.006 ± 0.071
0.0MetXaa: 0.0 ± 0.0
Asn
4.693AsnAla: 4.693 ± 0.707
0.67AsnCys: 0.67 ± 0.345
2.347AsnAsp: 2.347 ± 0.131
3.352AsnGlu: 3.352 ± 0.059
2.011AsnPhe: 2.011 ± 0.143
3.352AsnGly: 3.352 ± 0.386
0.67AsnHis: 0.67 ± 0.101
6.034AsnIle: 6.034 ± 0.909
3.017AsnLys: 3.017 ± 0.66
3.688AsnLeu: 3.688 ± 0.113
2.682AsnMet: 2.682 ± 0.487
2.347AsnAsn: 2.347 ± 0.315
3.352AsnPro: 3.352 ± 0.951
2.347AsnGln: 2.347 ± 0.131
3.017AsnArg: 3.017 ± 0.66
4.023AsnSer: 4.023 ± 1.052
4.693AsnThr: 4.693 ± 0.261
3.017AsnVal: 3.017 ± 0.232
1.676AsnTrp: 1.676 ± 0.921
2.011AsnTyr: 2.011 ± 0.303
0.0AsnXaa: 0.0 ± 0.0
Pro
2.347ProAla: 2.347 ± 1.022
1.006ProCys: 1.006 ± 0.374
2.011ProAsp: 2.011 ± 0.749
1.676ProGlu: 1.676 ± 0.03
2.682ProPhe: 2.682 ± 0.85
2.682ProGly: 2.682 ± 0.404
1.006ProHis: 1.006 ± 0.071
4.358ProIle: 4.358 ± 0.879
1.676ProLys: 1.676 ± 0.03
4.023ProLeu: 4.023 ± 0.16
0.67ProMet: 0.67 ± 0.101
3.017ProAsn: 3.017 ± 0.214
1.006ProPro: 1.006 ± 0.82
3.688ProGln: 3.688 ± 1.224
2.347ProArg: 2.347 ± 0.761
3.017ProSer: 3.017 ± 0.232
4.023ProThr: 4.023 ± 0.606
4.693ProVal: 4.693 ± 1.152
1.006ProTrp: 1.006 ± 0.071
1.006ProTyr: 1.006 ± 0.071
0.0ProXaa: 0.0 ± 0.0
Gln
3.688GlnAla: 3.688 ± 0.778
0.335GlnCys: 0.335 ± 0.273
2.011GlnAsp: 2.011 ± 1.64
2.011GlnGlu: 2.011 ± 0.588
1.341GlnPhe: 1.341 ± 0.244
2.347GlnGly: 2.347 ± 0.576
0.335GlnHis: 0.335 ± 0.172
4.358GlnIle: 4.358 ± 0.879
3.688GlnLys: 3.688 ± 1.224
5.028GlnLeu: 5.028 ± 2.317
0.335GlnMet: 0.335 ± 0.172
3.352GlnAsn: 3.352 ± 0.505
2.347GlnPro: 2.347 ± 0.576
1.676GlnGln: 1.676 ± 0.475
3.352GlnArg: 3.352 ± 0.059
1.006GlnSer: 1.006 ± 0.374
3.352GlnThr: 3.352 ± 0.059
2.347GlnVal: 2.347 ± 0.576
0.335GlnTrp: 0.335 ± 0.172
1.006GlnTyr: 1.006 ± 0.071
0.0GlnXaa: 0.0 ± 0.0
Arg
3.017ArgAla: 3.017 ± 1.123
1.006ArgCys: 1.006 ± 0.071
0.67ArgAsp: 0.67 ± 0.345
3.017ArgGlu: 3.017 ± 1.105
3.017ArgPhe: 3.017 ± 0.232
1.676ArgGly: 1.676 ± 0.416
0.335ArgHis: 0.335 ± 0.172
3.017ArgIle: 3.017 ± 0.232
3.688ArgLys: 3.688 ± 1.004
1.341ArgLeu: 1.341 ± 0.244
1.676ArgMet: 1.676 ± 0.03
3.017ArgAsn: 3.017 ± 0.214
3.352ArgPro: 3.352 ± 0.059
1.676ArgGln: 1.676 ± 0.416
1.341ArgArg: 1.341 ± 0.689
1.341ArgSer: 1.341 ± 0.244
2.347ArgThr: 2.347 ± 0.131
4.358ArgVal: 4.358 ± 0.458
0.335ArgTrp: 0.335 ± 0.172
2.347ArgTyr: 2.347 ± 0.576
0.0ArgXaa: 0.0 ± 0.0
Ser
3.352SerAla: 3.352 ± 0.059
0.67SerCys: 0.67 ± 0.345
3.688SerAsp: 3.688 ± 0.113
3.688SerGlu: 3.688 ± 0.333
1.006SerPhe: 1.006 ± 0.071
7.04SerGly: 7.04 ± 0.499
0.0SerHis: 0.0 ± 0.0
3.688SerIle: 3.688 ± 0.333
4.693SerLys: 4.693 ± 1.076
6.369SerLeu: 6.369 ± 0.291
3.017SerMet: 3.017 ± 1.105
3.688SerAsn: 3.688 ± 0.333
2.011SerPro: 2.011 ± 0.303
2.011SerGln: 2.011 ± 0.303
1.341SerArg: 1.341 ± 0.648
2.682SerSer: 2.682 ± 0.042
3.688SerThr: 3.688 ± 1.669
6.034SerVal: 6.034 ± 0.018
1.341SerTrp: 1.341 ± 0.648
2.682SerTyr: 2.682 ± 0.404
0.0SerXaa: 0.0 ± 0.0
Thr
4.358ThrAla: 4.358 ± 0.879
1.006ThrCys: 1.006 ± 0.071
2.682ThrAsp: 2.682 ± 0.487
3.688ThrGlu: 3.688 ± 0.113
4.023ThrPhe: 4.023 ± 1.177
2.347ThrGly: 2.347 ± 0.576
2.011ThrHis: 2.011 ± 0.303
6.369ThrIle: 6.369 ± 0.6
3.688ThrLys: 3.688 ± 0.559
6.705ThrLeu: 6.705 ± 1.218
1.006ThrMet: 1.006 ± 0.374
4.358ThrAsn: 4.358 ± 0.434
3.688ThrPro: 3.688 ± 0.778
4.358ThrGln: 4.358 ± 1.77
3.017ThrArg: 3.017 ± 0.232
4.693ThrSer: 4.693 ± 0.261
5.699ThrThr: 5.699 ± 1.972
2.347ThrVal: 2.347 ± 1.022
0.335ThrTrp: 0.335 ± 0.172
2.011ThrTyr: 2.011 ± 0.143
0.0ThrXaa: 0.0 ± 0.0
Val
3.688ValAla: 3.688 ± 0.113
0.335ValCys: 0.335 ± 0.273
5.364ValAsp: 5.364 ± 0.975
5.364ValGlu: 5.364 ± 0.362
4.023ValPhe: 4.023 ± 0.285
4.693ValGly: 4.693 ± 1.152
2.682ValHis: 2.682 ± 0.042
4.023ValIle: 4.023 ± 0.285
5.364ValLys: 5.364 ± 0.083
4.693ValLeu: 4.693 ± 0.261
1.006ValMet: 1.006 ± 0.071
3.017ValAsn: 3.017 ± 0.66
2.347ValPro: 2.347 ± 0.576
2.682ValGln: 2.682 ± 0.85
2.011ValArg: 2.011 ± 0.303
7.04ValSer: 7.04 ± 0.392
3.017ValThr: 3.017 ± 0.214
4.358ValVal: 4.358 ± 0.012
1.006ValTrp: 1.006 ± 0.374
2.347ValTyr: 2.347 ± 0.315
0.0ValXaa: 0.0 ± 0.0
Trp
0.67TrpAla: 0.67 ± 0.547
0.335TrpCys: 0.335 ± 0.172
2.011TrpAsp: 2.011 ± 0.749
0.335TrpGlu: 0.335 ± 0.273
1.341TrpPhe: 1.341 ± 0.244
0.335TrpGly: 0.335 ± 0.172
0.67TrpHis: 0.67 ± 0.345
0.67TrpIle: 0.67 ± 0.101
1.341TrpLys: 1.341 ± 0.202
0.67TrpLeu: 0.67 ± 0.101
0.67TrpMet: 0.67 ± 0.101
1.006TrpAsn: 1.006 ± 0.374
0.335TrpPro: 0.335 ± 0.172
0.335TrpGln: 0.335 ± 0.273
0.67TrpArg: 0.67 ± 0.101
0.335TrpSer: 0.335 ± 0.273
0.335TrpThr: 0.335 ± 0.172
0.335TrpVal: 0.335 ± 0.172
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.347TyrAla: 2.347 ± 0.131
0.0TyrCys: 0.0 ± 0.0
2.682TyrAsp: 2.682 ± 0.933
1.341TyrGlu: 1.341 ± 0.648
1.341TyrPhe: 1.341 ± 0.244
2.011TyrGly: 2.011 ± 0.143
0.335TyrHis: 0.335 ± 0.273
2.011TyrIle: 2.011 ± 0.143
4.023TyrLys: 4.023 ± 0.731
3.352TyrLeu: 3.352 ± 0.832
2.011TyrMet: 2.011 ± 0.588
1.676TyrAsn: 1.676 ± 0.862
1.341TyrPro: 1.341 ± 0.244
2.347TyrGln: 2.347 ± 1.022
1.341TyrArg: 1.341 ± 0.202
2.011TyrSer: 2.011 ± 0.143
2.682TyrThr: 2.682 ± 0.404
2.682TyrVal: 2.682 ± 0.85
1.006TyrTrp: 1.006 ± 0.071
1.006TyrTyr: 1.006 ± 0.071
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (2984 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski