Capybara microvirus Cap1_SP_161

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.08

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W4G3|A0A4P8W4G3_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_161 OX=2585397 PE=4 SV=1
MM1 pKa = 7.31NLYY4 pKa = 10.34VLYY7 pKa = 10.45DD8 pKa = 3.69KK9 pKa = 10.37EE10 pKa = 4.1AHH12 pKa = 6.41IVQCPYY18 pKa = 10.24PQPLEE23 pKa = 3.84NDD25 pKa = 4.03TIARR29 pKa = 11.84RR30 pKa = 11.84WWKK33 pKa = 10.46KK34 pKa = 6.75STEE37 pKa = 4.13SLVDD41 pKa = 3.17VMGILPSMISLYY53 pKa = 10.91CVGIWNKK60 pKa = 7.95EE61 pKa = 4.02TGEE64 pKa = 3.87ITPCFDD70 pKa = 3.09EE71 pKa = 4.49VAVISSDD78 pKa = 3.73DD79 pKa = 3.28

Molecular weight: 9.07 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W5A4|A0A4P8W5A4_9VIRU Major capsid protein OS=Capybara microvirus Cap1_SP_161 OX=2585397 PE=3 SV=1
MM1 pKa = 7.36ICSSPKK7 pKa = 10.27LVYY10 pKa = 10.59LKK12 pKa = 10.07NNCSIRR18 pKa = 11.84VPCGHH23 pKa = 7.46CINCRR28 pKa = 11.84IQKK31 pKa = 10.05SSDD34 pKa = 2.37WATRR38 pKa = 11.84ICLEE42 pKa = 4.61LPFWDD47 pKa = 3.87SNIFTTLTYY56 pKa = 10.98DD57 pKa = 4.2DD58 pKa = 4.92DD59 pKa = 5.97HH60 pKa = 8.43IPSDD64 pKa = 3.59WSIHH68 pKa = 6.67KK69 pKa = 10.47DD70 pKa = 3.26DD71 pKa = 4.14LQKK74 pKa = 10.67FFKK77 pKa = 10.37RR78 pKa = 11.84LRR80 pKa = 11.84RR81 pKa = 11.84EE82 pKa = 3.26IEE84 pKa = 3.99YY85 pKa = 10.11NAKK88 pKa = 10.61SNGLEE93 pKa = 4.12VPKK96 pKa = 10.26IAYY99 pKa = 7.62FASGEE104 pKa = 4.14YY105 pKa = 10.02GDD107 pKa = 4.4KK108 pKa = 10.87SMRR111 pKa = 11.84PHH113 pKa = 4.89YY114 pKa = 9.89HH115 pKa = 6.84AIIFGVGLDD124 pKa = 3.56LNNYY128 pKa = 9.04NNEE131 pKa = 4.01LQCYY135 pKa = 9.83YY136 pKa = 10.7SDD138 pKa = 4.68CKK140 pKa = 10.87LIEE143 pKa = 4.46NNWSYY148 pKa = 11.71GNVYY152 pKa = 9.76NGCVSYY158 pKa = 11.29DD159 pKa = 3.49SARR162 pKa = 11.84YY163 pKa = 6.4TADD166 pKa = 3.33YY167 pKa = 11.03VLKK170 pKa = 10.46QYY172 pKa = 10.94SGEE175 pKa = 4.11LKK177 pKa = 10.49QKK179 pKa = 10.5VYY181 pKa = 10.46TDD183 pKa = 3.75NGLEE187 pKa = 4.2TPFCIHH193 pKa = 6.82SNGIGKK199 pKa = 9.68RR200 pKa = 11.84FVEE203 pKa = 5.05VYY205 pKa = 10.05EE206 pKa = 4.1SDD208 pKa = 3.77IIGKK212 pKa = 9.89GYY214 pKa = 10.22IIIRR218 pKa = 11.84GVKK221 pKa = 9.38KK222 pKa = 10.15ALPRR226 pKa = 11.84YY227 pKa = 9.64FYY229 pKa = 10.73DD230 pKa = 3.58ILNKK234 pKa = 9.81KK235 pKa = 8.21YY236 pKa = 9.62RR237 pKa = 11.84WHH239 pKa = 6.01KK240 pKa = 10.77CEE242 pKa = 4.08YY243 pKa = 10.71DD244 pKa = 3.87DD245 pKa = 5.23DD246 pKa = 5.77GKK248 pKa = 10.92MIFGFSYY255 pKa = 10.6FEE257 pKa = 3.97NFQKK261 pKa = 10.65HH262 pKa = 3.91MKK264 pKa = 9.37NYY266 pKa = 9.31KK267 pKa = 10.24GEE269 pKa = 4.06YY270 pKa = 10.05LEE272 pKa = 4.53ADD274 pKa = 3.1QMEE277 pKa = 5.06LFRR280 pKa = 11.84RR281 pKa = 11.84WRR283 pKa = 11.84DD284 pKa = 3.3EE285 pKa = 3.92CKK287 pKa = 10.29EE288 pKa = 4.52LYY290 pKa = 10.63DD291 pKa = 4.86CDD293 pKa = 4.2VSFDD297 pKa = 4.9DD298 pKa = 5.49FLQKK302 pKa = 10.38EE303 pKa = 4.25KK304 pKa = 11.09CDD306 pKa = 4.13FSDD309 pKa = 5.11KK310 pKa = 10.67IEE312 pKa = 4.17QNVARR317 pKa = 11.84NKK319 pKa = 10.46LNEE322 pKa = 3.94HH323 pKa = 6.54KK324 pKa = 10.63KK325 pKa = 10.62IIDD328 pKa = 3.6AQRR331 pKa = 11.84SLII334 pKa = 3.94

Molecular weight: 39.61 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

1425

79

558

285.0

32.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.053 ± 0.72

1.825 ± 0.627

7.509 ± 0.825

5.614 ± 0.556

4.912 ± 0.695

5.895 ± 0.531

1.684 ± 0.398

5.263 ± 0.73

6.877 ± 1.527

8.07 ± 0.531

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.456 ± 0.278

5.895 ± 0.498

3.368 ± 0.955

5.053 ± 1.018

4.07 ± 0.409

9.404 ± 0.718

4.14 ± 0.822

5.965 ± 0.632

1.544 ± 0.307

5.404 ± 0.831
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski