Capybara microvirus Cap3_SP_389

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4V1FVS8|A0A4V1FVS8_9VIRU Nonstructural protein OS=Capybara microvirus Cap3_SP_389 OX=2585441 PE=4 SV=1
MM1 pKa = 7.07NRR3 pKa = 11.84EE4 pKa = 4.14SNNYY8 pKa = 9.57FSDD11 pKa = 3.55LPYY14 pKa = 10.14IEE16 pKa = 4.71KK17 pKa = 10.15PRR19 pKa = 11.84SKK21 pKa = 10.33FSRR24 pKa = 11.84PQPHH28 pKa = 5.9ITTFKK33 pKa = 10.86NGDD36 pKa = 4.55LIPVYY41 pKa = 9.98IDD43 pKa = 3.17EE44 pKa = 4.58VLPGDD49 pKa = 4.78SMTIDD54 pKa = 3.28VNAVVRR60 pKa = 11.84MMTPIYY66 pKa = 10.2PVMDD70 pKa = 4.1NLILDD75 pKa = 3.89VMAFYY80 pKa = 10.88CPNRR84 pKa = 11.84LLWTHH89 pKa = 4.94WQEE92 pKa = 4.4FLGEE96 pKa = 4.19NKK98 pKa = 8.45LTAWEE103 pKa = 4.19QPVKK107 pKa = 11.25YY108 pKa = 9.57EE109 pKa = 3.87IPQIKK114 pKa = 9.94APEE117 pKa = 4.66GGWKK121 pKa = 10.34AGTIADD127 pKa = 3.79YY128 pKa = 11.15LGIPTYY134 pKa = 11.05VEE136 pKa = 4.0NLSVNAMPFRR146 pKa = 11.84AYY148 pKa = 10.96SLIWNEE154 pKa = 3.58FFRR157 pKa = 11.84DD158 pKa = 3.48EE159 pKa = 4.1NLKK162 pKa = 10.8DD163 pKa = 3.19RR164 pKa = 11.84VMINLDD170 pKa = 3.14DD171 pKa = 3.82ATRR174 pKa = 11.84VGSNGDD180 pKa = 3.63KK181 pKa = 11.19EE182 pKa = 4.25GDD184 pKa = 3.82TYY186 pKa = 11.14VTTAQLGAKK195 pKa = 8.06PLKK198 pKa = 9.47VAKK201 pKa = 8.98THH203 pKa = 7.73DD204 pKa = 4.56YY205 pKa = 7.87FTSALPNTQKK215 pKa = 11.19GEE217 pKa = 3.89AVLIPVISAGTGGLIPVTAGEE238 pKa = 3.97RR239 pKa = 11.84HH240 pKa = 5.91IEE242 pKa = 4.16NGSVTGNGLLWATNQSGLNNWWNVQYY268 pKa = 11.21DD269 pKa = 4.01GLSDD273 pKa = 3.57NKK275 pKa = 9.88TVSTAATGGTIHH287 pKa = 6.84NGPIVPANLYY297 pKa = 11.13ANLEE301 pKa = 4.31DD302 pKa = 4.04SQSLATIGTINEE314 pKa = 4.03LRR316 pKa = 11.84QSFAIQRR323 pKa = 11.84ILEE326 pKa = 4.04AMARR330 pKa = 11.84GGSRR334 pKa = 11.84YY335 pKa = 8.13TEE337 pKa = 3.59ILKK340 pKa = 10.33NIWGVTAPDD349 pKa = 3.5ARR351 pKa = 11.84LQRR354 pKa = 11.84PEE356 pKa = 3.86YY357 pKa = 10.42LGGEE361 pKa = 4.55RR362 pKa = 11.84IPINMDD368 pKa = 2.95QVLQTSASNGNNPLGDD384 pKa = 3.12TGAFSNTGFSTTLVNKK400 pKa = 10.26SFVEE404 pKa = 3.78HH405 pKa = 6.74GYY407 pKa = 10.71VIIVAAARR415 pKa = 11.84IRR417 pKa = 11.84NHH419 pKa = 6.76TYY421 pKa = 9.55QQGLEE426 pKa = 4.24KK427 pKa = 9.25MWSRR431 pKa = 11.84KK432 pKa = 7.37TMYY435 pKa = 10.35DD436 pKa = 3.01FYY438 pKa = 10.36MPQLAYY444 pKa = 10.66LSEE447 pKa = 3.91QAVLNKK453 pKa = 10.13EE454 pKa = 4.09IYY456 pKa = 9.85AQGNRR461 pKa = 11.84EE462 pKa = 4.0DD463 pKa = 4.32EE464 pKa = 4.39EE465 pKa = 4.74VFGYY469 pKa = 7.43QEE471 pKa = 3.15RR472 pKa = 11.84WAEE475 pKa = 3.82YY476 pKa = 8.27RR477 pKa = 11.84YY478 pKa = 10.64KK479 pKa = 10.45PGRR482 pKa = 11.84VSGAMRR488 pKa = 11.84SNYY491 pKa = 9.61PNGSLDD497 pKa = 3.19SWHH500 pKa = 6.46YY501 pKa = 11.42ADD503 pKa = 6.01DD504 pKa = 4.23YY505 pKa = 11.23VSKK508 pKa = 10.74PMLSSEE514 pKa = 4.41WIDD517 pKa = 3.43EE518 pKa = 4.28GTSEE522 pKa = 4.47VDD524 pKa = 3.01RR525 pKa = 11.84TIAIQSEE532 pKa = 4.48LEE534 pKa = 4.13DD535 pKa = 3.4QFLADD540 pKa = 5.28FLFINNSTRR549 pKa = 11.84TMPIYY554 pKa = 10.38SVPGLLDD561 pKa = 3.54HH562 pKa = 6.83YY563 pKa = 11.48

Molecular weight: 63.26 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W8G2|A0A4P8W8G2_9VIRU Lysozyme OS=Capybara microvirus Cap3_SP_389 OX=2585441 PE=3 SV=1
MM1 pKa = 7.5SAIACIKK8 pKa = 9.61PIKK11 pKa = 9.94CWEE14 pKa = 4.04HH15 pKa = 5.92LKK17 pKa = 10.94KK18 pKa = 9.88KK19 pKa = 6.36TAKK22 pKa = 9.31GRR24 pKa = 11.84KK25 pKa = 8.83LISFKK30 pKa = 10.9QPTISDD36 pKa = 3.13IDD38 pKa = 3.48NWNEE42 pKa = 3.46IQIPCGQCIEE52 pKa = 4.09CRR54 pKa = 11.84LRR56 pKa = 11.84YY57 pKa = 8.9SRR59 pKa = 11.84HH60 pKa = 4.07WATRR64 pKa = 11.84LTLEE68 pKa = 4.42KK69 pKa = 10.11KK70 pKa = 7.22YY71 pKa = 10.78HH72 pKa = 6.08KK73 pKa = 10.05YY74 pKa = 10.85SYY76 pKa = 10.37FITLTYY82 pKa = 10.68DD83 pKa = 3.11EE84 pKa = 4.66EE85 pKa = 4.48HH86 pKa = 6.23LHH88 pKa = 5.74RR89 pKa = 11.84VEE91 pKa = 5.78NIDD94 pKa = 3.55TKK96 pKa = 10.4TGEE99 pKa = 4.05IVEE102 pKa = 4.68LSTLVKK108 pKa = 10.46KK109 pKa = 10.78DD110 pKa = 3.17MQDD113 pKa = 2.85FLKK116 pKa = 10.34RR117 pKa = 11.84YY118 pKa = 8.2RR119 pKa = 11.84YY120 pKa = 9.79YY121 pKa = 9.45YY122 pKa = 10.98GKK124 pKa = 10.09IKK126 pKa = 10.42FYY128 pKa = 10.75QCGEE132 pKa = 4.22YY133 pKa = 10.92GEE135 pKa = 4.37QTHH138 pKa = 6.38RR139 pKa = 11.84RR140 pKa = 11.84HH141 pKa = 5.26HH142 pKa = 6.08HH143 pKa = 5.6MIVFQEE149 pKa = 4.27RR150 pKa = 11.84PIEE153 pKa = 3.99PLEE156 pKa = 3.79FLKK159 pKa = 10.74LQKK162 pKa = 10.54DD163 pKa = 3.8NQPLYY168 pKa = 11.05TNLPLQKK175 pKa = 9.5IWGKK179 pKa = 10.76GMITIGEE186 pKa = 4.31VTPEE190 pKa = 3.63SRR192 pKa = 11.84GYY194 pKa = 8.08VARR197 pKa = 11.84YY198 pKa = 8.61VLKK201 pKa = 9.91KK202 pKa = 10.65QKK204 pKa = 10.78GEE206 pKa = 3.81SSNIYY211 pKa = 8.28NTLGILPEE219 pKa = 4.27YY220 pKa = 9.78VTMSNGIGMEE230 pKa = 3.95YY231 pKa = 10.62FKK233 pKa = 11.29DD234 pKa = 3.73NKK236 pKa = 9.2TKK238 pKa = 10.13IYY240 pKa = 10.18QYY242 pKa = 11.47DD243 pKa = 4.0SIILTGMHH251 pKa = 6.65GEE253 pKa = 4.07AKK255 pKa = 9.83KK256 pKa = 10.69VKK258 pKa = 9.4PPRR261 pKa = 11.84AFDD264 pKa = 3.49EE265 pKa = 4.41EE266 pKa = 4.3LAKK269 pKa = 10.98EE270 pKa = 4.01NLSEE274 pKa = 3.95ITSIKK279 pKa = 10.1DD280 pKa = 3.0KK281 pKa = 10.84RR282 pKa = 11.84RR283 pKa = 11.84AAAIRR288 pKa = 11.84GRR290 pKa = 11.84SVKK293 pKa = 9.63EE294 pKa = 3.63AQTEE298 pKa = 4.1NVNWAKK304 pKa = 10.75VEE306 pKa = 3.94SDD308 pKa = 3.55YY309 pKa = 11.55KK310 pKa = 10.2QARR313 pKa = 11.84QKK315 pKa = 10.5ILNKK319 pKa = 10.31RR320 pKa = 11.84EE321 pKa = 3.61VDD323 pKa = 3.71DD324 pKa = 4.16

Molecular weight: 38.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1605

74

563

229.3

26.18

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.854 ± 1.486

0.748 ± 0.334

5.483 ± 0.421

7.975 ± 0.86

3.427 ± 0.43

6.729 ± 0.502

1.62 ± 0.424

7.539 ± 0.74

7.477 ± 1.537

7.04 ± 0.647

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.617 ± 0.327

5.919 ± 0.785

3.614 ± 0.712

3.988 ± 0.214

5.234 ± 0.286

6.231 ± 0.969

6.355 ± 0.463

4.361 ± 0.585

1.807 ± 0.243

4.984 ± 0.425
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski