Amino acid dipepetide frequency for Hubei odonate virus 5

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.842AlaAla: 3.842 ± 0.0
2.096AlaCys: 2.096 ± 0.0
2.794AlaAsp: 2.794 ± 0.0
2.445AlaGlu: 2.445 ± 0.0
2.096AlaPhe: 2.096 ± 0.0
4.541AlaGly: 4.541 ± 0.0
0.349AlaHis: 0.349 ± 0.0
2.096AlaIle: 2.096 ± 0.0
3.842AlaLys: 3.842 ± 0.0
4.89AlaLeu: 4.89 ± 0.0
0.699AlaMet: 0.699 ± 0.0
3.493AlaAsn: 3.493 ± 0.0
1.746AlaPro: 1.746 ± 0.0
2.794AlaGln: 2.794 ± 0.0
2.096AlaArg: 2.096 ± 0.0
4.191AlaSer: 4.191 ± 0.0
6.636AlaThr: 6.636 ± 0.0
3.144AlaVal: 3.144 ± 0.0
0.699AlaTrp: 0.699 ± 0.0
3.493AlaTyr: 3.493 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
2.445CysAla: 2.445 ± 0.0
0.349CysCys: 0.349 ± 0.0
1.746CysAsp: 1.746 ± 0.0
0.699CysGlu: 0.699 ± 0.0
0.699CysPhe: 0.699 ± 0.0
1.746CysGly: 1.746 ± 0.0
0.699CysHis: 0.699 ± 0.0
0.699CysIle: 0.699 ± 0.0
0.699CysLys: 0.699 ± 0.0
1.397CysLeu: 1.397 ± 0.0
0.699CysMet: 0.699 ± 0.0
0.699CysAsn: 0.699 ± 0.0
1.048CysPro: 1.048 ± 0.0
0.699CysGln: 0.699 ± 0.0
0.349CysArg: 0.349 ± 0.0
3.144CysSer: 3.144 ± 0.0
1.397CysThr: 1.397 ± 0.0
1.746CysVal: 1.746 ± 0.0
0.0CysTrp: 0.0 ± 0.0
1.746CysTyr: 1.746 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.493AspAla: 3.493 ± 0.0
1.048AspCys: 1.048 ± 0.0
3.144AspAsp: 3.144 ± 0.0
4.191AspGlu: 4.191 ± 0.0
3.842AspPhe: 3.842 ± 0.0
2.096AspGly: 2.096 ± 0.0
1.397AspHis: 1.397 ± 0.0
4.541AspIle: 4.541 ± 0.0
2.794AspLys: 2.794 ± 0.0
4.541AspLeu: 4.541 ± 0.0
0.699AspMet: 0.699 ± 0.0
3.493AspAsn: 3.493 ± 0.0
3.842AspPro: 3.842 ± 0.0
1.048AspGln: 1.048 ± 0.0
1.746AspArg: 1.746 ± 0.0
4.191AspSer: 4.191 ± 0.0
2.794AspThr: 2.794 ± 0.0
1.746AspVal: 1.746 ± 0.0
2.096AspTrp: 2.096 ± 0.0
1.397AspTyr: 1.397 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
3.842GluAla: 3.842 ± 0.0
0.349GluCys: 0.349 ± 0.0
1.746GluAsp: 1.746 ± 0.0
5.938GluGlu: 5.938 ± 0.0
2.794GluPhe: 2.794 ± 0.0
4.541GluGly: 4.541 ± 0.0
0.699GluHis: 0.699 ± 0.0
4.89GluIle: 4.89 ± 0.0
3.144GluLys: 3.144 ± 0.0
5.239GluLeu: 5.239 ± 0.0
1.746GluMet: 1.746 ± 0.0
2.794GluAsn: 2.794 ± 0.0
1.397GluPro: 1.397 ± 0.0
2.445GluGln: 2.445 ± 0.0
3.144GluArg: 3.144 ± 0.0
3.144GluSer: 3.144 ± 0.0
3.144GluThr: 3.144 ± 0.0
4.191GluVal: 4.191 ± 0.0
0.699GluTrp: 0.699 ± 0.0
2.445GluTyr: 2.445 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
3.493PheAla: 3.493 ± 0.0
2.096PheCys: 2.096 ± 0.0
2.794PheAsp: 2.794 ± 0.0
3.144PheGlu: 3.144 ± 0.0
2.445PhePhe: 2.445 ± 0.0
2.794PheGly: 2.794 ± 0.0
0.699PheHis: 0.699 ± 0.0
4.541PheIle: 4.541 ± 0.0
2.794PheLys: 2.794 ± 0.0
5.239PheLeu: 5.239 ± 0.0
0.699PheMet: 0.699 ± 0.0
3.493PheAsn: 3.493 ± 0.0
2.445PhePro: 2.445 ± 0.0
1.048PheGln: 1.048 ± 0.0
0.699PheArg: 0.699 ± 0.0
3.493PheSer: 3.493 ± 0.0
2.096PheThr: 2.096 ± 0.0
4.191PheVal: 4.191 ± 0.0
0.349PheTrp: 0.349 ± 0.0
1.397PheTyr: 1.397 ± 0.0
0.0PheXaa: 0.0 ± 0.0
Gly
3.144GlyAla: 3.144 ± 0.0
0.349GlyCys: 0.349 ± 0.0
3.144GlyAsp: 3.144 ± 0.0
2.445GlyGlu: 2.445 ± 0.0
2.794GlyPhe: 2.794 ± 0.0
1.397GlyGly: 1.397 ± 0.0
1.397GlyHis: 1.397 ± 0.0
4.541GlyIle: 4.541 ± 0.0
3.842GlyLys: 3.842 ± 0.0
4.191GlyLeu: 4.191 ± 0.0
1.397GlyMet: 1.397 ± 0.0
2.794GlyAsn: 2.794 ± 0.0
3.144GlyPro: 3.144 ± 0.0
1.397GlyGln: 1.397 ± 0.0
3.144GlyArg: 3.144 ± 0.0
5.589GlySer: 5.589 ± 0.0
3.493GlyThr: 3.493 ± 0.0
4.89GlyVal: 4.89 ± 0.0
0.349GlyTrp: 0.349 ± 0.0
1.746GlyTyr: 1.746 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
1.048HisAla: 1.048 ± 0.0
0.349HisCys: 0.349 ± 0.0
0.699HisAsp: 0.699 ± 0.0
1.397HisGlu: 1.397 ± 0.0
2.445HisPhe: 2.445 ± 0.0
0.699HisGly: 0.699 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.397HisIle: 1.397 ± 0.0
0.699HisLys: 0.699 ± 0.0
2.096HisLeu: 2.096 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.048HisAsn: 1.048 ± 0.0
1.048HisPro: 1.048 ± 0.0
0.699HisGln: 0.699 ± 0.0
0.0HisArg: 0.0 ± 0.0
0.699HisSer: 0.699 ± 0.0
1.746HisThr: 1.746 ± 0.0
0.0HisVal: 0.0 ± 0.0
0.699HisTrp: 0.699 ± 0.0
1.397HisTyr: 1.397 ± 0.0
0.0HisXaa: 0.0 ± 0.0
Ile
3.493IleAla: 3.493 ± 0.0
1.397IleCys: 1.397 ± 0.0
3.144IleAsp: 3.144 ± 0.0
4.541IleGlu: 4.541 ± 0.0
2.445IlePhe: 2.445 ± 0.0
3.144IleGly: 3.144 ± 0.0
0.699IleHis: 0.699 ± 0.0
2.794IleIle: 2.794 ± 0.0
3.493IleLys: 3.493 ± 0.0
4.89IleLeu: 4.89 ± 0.0
2.445IleMet: 2.445 ± 0.0
3.144IleAsn: 3.144 ± 0.0
5.239IlePro: 5.239 ± 0.0
3.144IleGln: 3.144 ± 0.0
1.397IleArg: 1.397 ± 0.0
6.636IleSer: 6.636 ± 0.0
3.144IleThr: 3.144 ± 0.0
3.493IleVal: 3.493 ± 0.0
0.0IleTrp: 0.0 ± 0.0
1.397IleTyr: 1.397 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
3.144LysAla: 3.144 ± 0.0
1.397LysCys: 1.397 ± 0.0
3.144LysAsp: 3.144 ± 0.0
4.191LysGlu: 4.191 ± 0.0
2.794LysPhe: 2.794 ± 0.0
4.541LysGly: 4.541 ± 0.0
2.096LysHis: 2.096 ± 0.0
3.144LysIle: 3.144 ± 0.0
2.794LysLys: 2.794 ± 0.0
3.842LysLeu: 3.842 ± 0.0
0.699LysMet: 0.699 ± 0.0
3.493LysAsn: 3.493 ± 0.0
2.096LysPro: 2.096 ± 0.0
1.048LysGln: 1.048 ± 0.0
2.445LysArg: 2.445 ± 0.0
3.842LysSer: 3.842 ± 0.0
4.541LysThr: 4.541 ± 0.0
5.239LysVal: 5.239 ± 0.0
1.048LysTrp: 1.048 ± 0.0
2.794LysTyr: 2.794 ± 0.0
0.0LysXaa: 0.0 ± 0.0
Leu
2.445LeuAla: 2.445 ± 0.0
1.746LeuCys: 1.746 ± 0.0
5.239LeuAsp: 5.239 ± 0.0
3.493LeuGlu: 3.493 ± 0.0
3.144LeuPhe: 3.144 ± 0.0
5.239LeuGly: 5.239 ± 0.0
3.493LeuHis: 3.493 ± 0.0
4.191LeuIle: 4.191 ± 0.0
9.78LeuLys: 9.78 ± 0.0
8.034LeuLeu: 8.034 ± 0.0
2.096LeuMet: 2.096 ± 0.0
4.89LeuAsn: 4.89 ± 0.0
4.191LeuPro: 4.191 ± 0.0
2.445LeuGln: 2.445 ± 0.0
2.445LeuArg: 2.445 ± 0.0
9.081LeuSer: 9.081 ± 0.0
5.938LeuThr: 5.938 ± 0.0
6.287LeuVal: 6.287 ± 0.0
1.397LeuTrp: 1.397 ± 0.0
2.445LeuTyr: 2.445 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
1.048MetAla: 1.048 ± 0.0
0.699MetCys: 0.699 ± 0.0
1.397MetAsp: 1.397 ± 0.0
1.397MetGlu: 1.397 ± 0.0
3.144MetPhe: 3.144 ± 0.0
1.397MetGly: 1.397 ± 0.0
0.349MetHis: 0.349 ± 0.0
0.699MetIle: 0.699 ± 0.0
0.699MetLys: 0.699 ± 0.0
2.445MetLeu: 2.445 ± 0.0
0.349MetMet: 0.349 ± 0.0
1.746MetAsn: 1.746 ± 0.0
0.349MetPro: 0.349 ± 0.0
0.0MetGln: 0.0 ± 0.0
2.794MetArg: 2.794 ± 0.0
2.794MetSer: 2.794 ± 0.0
1.397MetThr: 1.397 ± 0.0
1.048MetVal: 1.048 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.699MetTyr: 0.699 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.144AsnAla: 3.144 ± 0.0
0.699AsnCys: 0.699 ± 0.0
4.191AsnAsp: 4.191 ± 0.0
3.842AsnGlu: 3.842 ± 0.0
5.589AsnPhe: 5.589 ± 0.0
2.445AsnGly: 2.445 ± 0.0
0.699AsnHis: 0.699 ± 0.0
2.445AsnIle: 2.445 ± 0.0
1.746AsnLys: 1.746 ± 0.0
5.589AsnLeu: 5.589 ± 0.0
0.699AsnMet: 0.699 ± 0.0
4.191AsnAsn: 4.191 ± 0.0
3.493AsnPro: 3.493 ± 0.0
1.746AsnGln: 1.746 ± 0.0
2.794AsnArg: 2.794 ± 0.0
2.794AsnSer: 2.794 ± 0.0
5.589AsnThr: 5.589 ± 0.0
3.493AsnVal: 3.493 ± 0.0
0.699AsnTrp: 0.699 ± 0.0
1.746AsnTyr: 1.746 ± 0.0
0.0AsnXaa: 0.0 ± 0.0
Pro
1.048ProAla: 1.048 ± 0.0
1.048ProCys: 1.048 ± 0.0
2.096ProAsp: 2.096 ± 0.0
1.048ProGlu: 1.048 ± 0.0
2.096ProPhe: 2.096 ± 0.0
2.096ProGly: 2.096 ± 0.0
1.048ProHis: 1.048 ± 0.0
3.144ProIle: 3.144 ± 0.0
3.493ProLys: 3.493 ± 0.0
4.89ProLeu: 4.89 ± 0.0
0.699ProMet: 0.699 ± 0.0
2.445ProAsn: 2.445 ± 0.0
1.048ProPro: 1.048 ± 0.0
3.493ProGln: 3.493 ± 0.0
2.445ProArg: 2.445 ± 0.0
5.239ProSer: 5.239 ± 0.0
4.89ProThr: 4.89 ± 0.0
1.397ProVal: 1.397 ± 0.0
0.0ProTrp: 0.0 ± 0.0
3.144ProTyr: 3.144 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
2.096GlnAla: 2.096 ± 0.0
1.048GlnCys: 1.048 ± 0.0
1.746GlnAsp: 1.746 ± 0.0
1.397GlnGlu: 1.397 ± 0.0
1.746GlnPhe: 1.746 ± 0.0
0.699GlnGly: 0.699 ± 0.0
0.0GlnHis: 0.0 ± 0.0
2.445GlnIle: 2.445 ± 0.0
2.096GlnLys: 2.096 ± 0.0
3.842GlnLeu: 3.842 ± 0.0
1.746GlnMet: 1.746 ± 0.0
2.445GlnAsn: 2.445 ± 0.0
2.445GlnPro: 2.445 ± 0.0
2.794GlnGln: 2.794 ± 0.0
2.096GlnArg: 2.096 ± 0.0
2.096GlnSer: 2.096 ± 0.0
2.096GlnThr: 2.096 ± 0.0
3.493GlnVal: 3.493 ± 0.0
0.349GlnTrp: 0.349 ± 0.0
1.397GlnTyr: 1.397 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.096ArgAla: 2.096 ± 0.0
1.746ArgCys: 1.746 ± 0.0
1.397ArgAsp: 1.397 ± 0.0
3.842ArgGlu: 3.842 ± 0.0
1.397ArgPhe: 1.397 ± 0.0
2.445ArgGly: 2.445 ± 0.0
1.048ArgHis: 1.048 ± 0.0
2.445ArgIle: 2.445 ± 0.0
2.445ArgLys: 2.445 ± 0.0
3.144ArgLeu: 3.144 ± 0.0
2.096ArgMet: 2.096 ± 0.0
3.144ArgAsn: 3.144 ± 0.0
1.746ArgPro: 1.746 ± 0.0
1.746ArgGln: 1.746 ± 0.0
4.541ArgArg: 4.541 ± 0.0
2.794ArgSer: 2.794 ± 0.0
3.493ArgThr: 3.493 ± 0.0
3.493ArgVal: 3.493 ± 0.0
0.699ArgTrp: 0.699 ± 0.0
0.349ArgTyr: 0.349 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
5.938SerAla: 5.938 ± 0.0
1.746SerCys: 1.746 ± 0.0
6.287SerAsp: 6.287 ± 0.0
3.842SerGlu: 3.842 ± 0.0
3.842SerPhe: 3.842 ± 0.0
3.144SerGly: 3.144 ± 0.0
2.096SerHis: 2.096 ± 0.0
4.89SerIle: 4.89 ± 0.0
4.191SerLys: 4.191 ± 0.0
5.938SerLeu: 5.938 ± 0.0
3.144SerMet: 3.144 ± 0.0
5.589SerAsn: 5.589 ± 0.0
2.794SerPro: 2.794 ± 0.0
3.493SerGln: 3.493 ± 0.0
3.842SerArg: 3.842 ± 0.0
5.938SerSer: 5.938 ± 0.0
4.541SerThr: 4.541 ± 0.0
4.191SerVal: 4.191 ± 0.0
1.048SerTrp: 1.048 ± 0.0
4.89SerTyr: 4.89 ± 0.0
0.0SerXaa: 0.0 ± 0.0
Thr
6.287ThrAla: 6.287 ± 0.0
2.794ThrCys: 2.794 ± 0.0
4.89ThrAsp: 4.89 ± 0.0
2.445ThrGlu: 2.445 ± 0.0
2.794ThrPhe: 2.794 ± 0.0
4.541ThrGly: 4.541 ± 0.0
0.699ThrHis: 0.699 ± 0.0
4.89ThrIle: 4.89 ± 0.0
3.493ThrLys: 3.493 ± 0.0
8.383ThrLeu: 8.383 ± 0.0
1.397ThrMet: 1.397 ± 0.0
3.493ThrAsn: 3.493 ± 0.0
2.096ThrPro: 2.096 ± 0.0
3.842ThrGln: 3.842 ± 0.0
3.493ThrArg: 3.493 ± 0.0
5.239ThrSer: 5.239 ± 0.0
4.89ThrThr: 4.89 ± 0.0
3.493ThrVal: 3.493 ± 0.0
0.699ThrTrp: 0.699 ± 0.0
0.699ThrTyr: 0.699 ± 0.0
0.0ThrXaa: 0.0 ± 0.0
Val
4.89ValAla: 4.89 ± 0.0
0.349ValCys: 0.349 ± 0.0
2.096ValAsp: 2.096 ± 0.0
3.144ValGlu: 3.144 ± 0.0
1.397ValPhe: 1.397 ± 0.0
4.191ValGly: 4.191 ± 0.0
0.0ValHis: 0.0 ± 0.0
2.096ValIle: 2.096 ± 0.0
4.191ValLys: 4.191 ± 0.0
5.589ValLeu: 5.589 ± 0.0
1.746ValMet: 1.746 ± 0.0
2.445ValAsn: 2.445 ± 0.0
4.89ValPro: 4.89 ± 0.0
2.794ValGln: 2.794 ± 0.0
3.493ValArg: 3.493 ± 0.0
6.287ValSer: 6.287 ± 0.0
5.239ValThr: 5.239 ± 0.0
4.541ValVal: 4.541 ± 0.0
0.699ValTrp: 0.699 ± 0.0
2.445ValTyr: 2.445 ± 0.0
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.699TrpCys: 0.699 ± 0.0
0.349TrpAsp: 0.349 ± 0.0
1.048TrpGlu: 1.048 ± 0.0
0.349TrpPhe: 0.349 ± 0.0
0.699TrpGly: 0.699 ± 0.0
0.0TrpHis: 0.0 ± 0.0
1.746TrpIle: 1.746 ± 0.0
0.699TrpLys: 0.699 ± 0.0
2.445TrpLeu: 2.445 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.349TrpAsn: 0.349 ± 0.0
0.699TrpPro: 0.699 ± 0.0
0.349TrpGln: 0.349 ± 0.0
1.746TrpArg: 1.746 ± 0.0
0.349TrpSer: 0.349 ± 0.0
0.349TrpThr: 0.349 ± 0.0
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.699TrpTyr: 0.699 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
1.397TyrAla: 1.397 ± 0.0
0.699TyrCys: 0.699 ± 0.0
2.096TyrAsp: 2.096 ± 0.0
3.842TyrGlu: 3.842 ± 0.0
2.096TyrPhe: 2.096 ± 0.0
2.794TyrGly: 2.794 ± 0.0
0.699TyrHis: 0.699 ± 0.0
2.445TyrIle: 2.445 ± 0.0
1.397TyrLys: 1.397 ± 0.0
1.397TyrLeu: 1.397 ± 0.0
1.048TyrMet: 1.048 ± 0.0
2.445TyrAsn: 2.445 ± 0.0
1.048TyrPro: 1.048 ± 0.0
1.048TyrGln: 1.048 ± 0.0
1.397TyrArg: 1.397 ± 0.0
3.842TyrSer: 3.842 ± 0.0
3.144TyrThr: 3.144 ± 0.0
2.445TyrVal: 2.445 ± 0.0
1.048TyrTrp: 1.048 ± 0.0
0.699TyrTyr: 0.699 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 1 proteins (2864 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski