Ordospora colligata OC4

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Microsporidia; Microsporidia incertae sedis; Ordosporidae; Ordospora; Ordospora colligata

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1810 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0B2UIJ9|A0A0B2UIJ9_9MICR Uncharacterized protein OS=Ordospora colligata OC4 OX=1354746 GN=M896_100530 PE=4 SV=1
MM1 pKa = 7.61SSRR4 pKa = 11.84FEE6 pKa = 4.27PEE8 pKa = 3.31YY9 pKa = 10.28EE10 pKa = 4.02AYY12 pKa = 10.26FKK14 pKa = 10.96RR15 pKa = 11.84DD16 pKa = 3.57VVPTDD21 pKa = 3.54YY22 pKa = 11.28NDD24 pKa = 3.46EE25 pKa = 4.29VNDD28 pKa = 3.59YY29 pKa = 10.34PVYY32 pKa = 10.99DD33 pKa = 5.03EE34 pKa = 5.89IDD36 pKa = 3.44MKK38 pKa = 11.23DD39 pKa = 3.59FEE41 pKa = 4.68YY42 pKa = 11.18SSANRR47 pKa = 11.84TFYY50 pKa = 10.89YY51 pKa = 9.86PCPCGDD57 pKa = 3.45RR58 pKa = 11.84FEE60 pKa = 5.74ISLDD64 pKa = 3.43DD65 pKa = 4.06LRR67 pKa = 11.84NGEE70 pKa = 4.31IIARR74 pKa = 11.84CPSCSLLIRR83 pKa = 11.84IVYY86 pKa = 10.12EE87 pKa = 4.06SDD89 pKa = 3.69DD90 pKa = 3.81LQAYY94 pKa = 7.26EE95 pKa = 4.11

Molecular weight: 11.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0B2UHZ0|A0A0B2UHZ0_9MICR Putative ubiquitin-protein ligase OS=Ordospora colligata OC4 OX=1354746 GN=M896_121860 PE=3 SV=1
MM1 pKa = 7.3GAVNYY6 pKa = 10.47LMEE9 pKa = 4.01IHH11 pKa = 6.86RR12 pKa = 11.84RR13 pKa = 11.84KK14 pKa = 10.01QSDD17 pKa = 3.37VMRR20 pKa = 11.84YY21 pKa = 8.17LLRR24 pKa = 11.84IRR26 pKa = 11.84VCEE29 pKa = 3.56YY30 pKa = 9.94RR31 pKa = 11.84QRR33 pKa = 11.84GEE35 pKa = 3.97CFRR38 pKa = 11.84VEE40 pKa = 4.38KK41 pKa = 9.12PTFLDD46 pKa = 3.45RR47 pKa = 11.84ARR49 pKa = 11.84SLGYY53 pKa = 9.52KK54 pKa = 9.99AKK56 pKa = 10.09QGYY59 pKa = 7.86VLYY62 pKa = 10.26VARR65 pKa = 11.84VKK67 pKa = 10.67KK68 pKa = 10.91GNLKK72 pKa = 10.37RR73 pKa = 11.84NYY75 pKa = 9.97HH76 pKa = 5.88NGNTRR81 pKa = 11.84GKK83 pKa = 9.82CVNAGIAQIKK93 pKa = 9.08PSQRR97 pKa = 11.84KK98 pKa = 6.68QVNAEE103 pKa = 3.73MVAGKK108 pKa = 9.87KK109 pKa = 10.04CSNLGVLNSYY119 pKa = 9.43WIGHH123 pKa = 6.23DD124 pKa = 3.22AAYY127 pKa = 9.73KK128 pKa = 8.07YY129 pKa = 11.06YY130 pKa = 10.22EE131 pKa = 4.25VIMVDD136 pKa = 3.26RR137 pKa = 11.84HH138 pKa = 5.88HH139 pKa = 6.0MAIRR143 pKa = 11.84NDD145 pKa = 3.64PKK147 pKa = 10.78INWICRR153 pKa = 11.84PTMKK157 pKa = 10.16HH158 pKa = 5.37RR159 pKa = 11.84EE160 pKa = 4.2CRR162 pKa = 11.84GLTSAAKK169 pKa = 10.06KK170 pKa = 10.52SRR172 pKa = 11.84GLGKK176 pKa = 9.87GVRR179 pKa = 11.84YY180 pKa = 9.77NKK182 pKa = 10.5SKK184 pKa = 10.13GGSMRR189 pKa = 11.84ACWRR193 pKa = 11.84RR194 pKa = 11.84RR195 pKa = 11.84NTLVLQKK202 pKa = 10.7YY203 pKa = 8.28RR204 pKa = 3.68

Molecular weight: 23.82 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1810

0

1810

644518

51

3459

356.1

40.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.821 ± 0.037

2.408 ± 0.029

5.775 ± 0.038

7.969 ± 0.076

4.666 ± 0.042

5.534 ± 0.042

1.986 ± 0.023

7.725 ± 0.049

7.852 ± 0.063

8.549 ± 0.048

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.789 ± 0.033

5.063 ± 0.038

2.591 ± 0.033

2.673 ± 0.031

5.272 ± 0.042

7.395 ± 0.049

4.061 ± 0.044

7.289 ± 0.057

0.698 ± 0.014

3.884 ± 0.033
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski