Tortoise microvirus 63

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.35

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W7L1|A0A4P8W7L1_9VIRU Uncharacterized protein OS=Tortoise microvirus 63 OX=2583169 PE=4 SV=1
MM1 pKa = 7.39YY2 pKa = 10.25SVCLDD7 pKa = 3.75DD8 pKa = 6.42GSIIGCGLGDD18 pKa = 4.33CYY20 pKa = 10.9DD21 pKa = 3.42VHH23 pKa = 8.53LLIPHH28 pKa = 7.04LMMDD32 pKa = 5.36AIDD35 pKa = 3.91NVLNGDD41 pKa = 3.9TMTLQDD47 pKa = 5.69FIRR50 pKa = 11.84LACAEE55 pKa = 4.1YY56 pKa = 11.13LFICGDD62 pKa = 3.5NYY64 pKa = 10.74VPKK67 pKa = 10.11TT68 pKa = 3.6

Molecular weight: 7.52 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W7B6|A0A4P8W7B6_9VIRU Uncharacterized protein OS=Tortoise microvirus 63 OX=2583169 PE=4 SV=1
MM1 pKa = 7.4SCANPITITVKK12 pKa = 10.27GRR14 pKa = 11.84PVQVGCRR21 pKa = 11.84HH22 pKa = 6.08CLSCRR27 pKa = 11.84LDD29 pKa = 3.49YY30 pKa = 11.13QIALEE35 pKa = 4.07FAVKK39 pKa = 10.51HH40 pKa = 5.43EE41 pKa = 4.8LFDD44 pKa = 3.99IYY46 pKa = 11.03QSGLGACFATLTYY59 pKa = 10.51ADD61 pKa = 4.23SALPPHH67 pKa = 6.51GSLRR71 pKa = 11.84KK72 pKa = 9.48SDD74 pKa = 3.65FQNFLKK80 pKa = 10.59NVRR83 pKa = 11.84IQAKK87 pKa = 9.95RR88 pKa = 11.84KK89 pKa = 7.72GTLPPFKK96 pKa = 10.59YY97 pKa = 9.83LACGEE102 pKa = 4.31YY103 pKa = 10.34GDD105 pKa = 4.46KK106 pKa = 10.53FGRR109 pKa = 11.84PHH111 pKa = 5.25YY112 pKa = 10.13HH113 pKa = 6.39VIFLGVTDD121 pKa = 4.39ALFNQFIRR129 pKa = 11.84PLWKK133 pKa = 10.23HH134 pKa = 5.72GLCDD138 pKa = 4.08CSTLGSGAIRR148 pKa = 11.84YY149 pKa = 7.11VLKK152 pKa = 10.9YY153 pKa = 8.14CTKK156 pKa = 10.54SAMGSKK162 pKa = 10.03AKK164 pKa = 10.21EE165 pKa = 4.04MYY167 pKa = 10.28DD168 pKa = 3.65DD169 pKa = 4.01QSLTRR174 pKa = 11.84PFIVHH179 pKa = 6.05SKK181 pKa = 10.4RR182 pKa = 11.84LGFNWLIRR190 pKa = 11.84NRR192 pKa = 11.84DD193 pKa = 3.62DD194 pKa = 4.76LVANNFCYY202 pKa = 10.44LNKK205 pKa = 9.83GHH207 pKa = 7.02RR208 pKa = 11.84VPLPAYY214 pKa = 9.33YY215 pKa = 10.0RR216 pKa = 11.84RR217 pKa = 11.84QFDD220 pKa = 3.24IYY222 pKa = 10.89GTFCPLPQIQQLDD235 pKa = 3.89AEE237 pKa = 4.97AKK239 pKa = 7.73QHH241 pKa = 6.29GYY243 pKa = 9.49PSYY246 pKa = 10.82RR247 pKa = 11.84EE248 pKa = 3.74WSIQKK253 pKa = 10.22AFNRR257 pKa = 11.84EE258 pKa = 3.34QDD260 pKa = 3.13LTIAVRR266 pKa = 11.84NDD268 pKa = 4.52GIPVDD273 pKa = 4.8SLITPNRR280 pKa = 11.84GYY282 pKa = 10.99SPLDD286 pKa = 3.33TSIVPQVLNRR296 pKa = 11.84SS297 pKa = 3.62

Molecular weight: 33.84 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1676

68

578

239.4

26.8

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.637 ± 1.396

1.372 ± 0.843

6.981 ± 0.811

4.057 ± 0.759

5.012 ± 0.574

6.146 ± 0.669

1.79 ± 0.294

4.893 ± 0.899

3.878 ± 1.222

8.652 ± 0.84

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.983 ± 0.458

4.654 ± 0.451

5.609 ± 0.709

5.43 ± 1.571

5.251 ± 0.468

9.069 ± 0.94

5.489 ± 0.923

5.489 ± 0.629

0.955 ± 0.143

4.654 ± 0.514
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski