Torque teno virus 10

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 9.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E3TH04|E3TH04_9VIRU Capsid protein OS=Torque teno virus 10 OX=687349 PE=3 SV=1
MM1 pKa = 7.81AEE3 pKa = 3.58FMLPVRR9 pKa = 11.84RR10 pKa = 11.84EE11 pKa = 3.67EE12 pKa = 3.79PRR14 pKa = 11.84RR15 pKa = 11.84GIRR18 pKa = 11.84TSRR21 pKa = 11.84GRR23 pKa = 11.84VPEE26 pKa = 4.17VSLHH30 pKa = 5.18TAVKK34 pKa = 9.84GQFGLGTGRR43 pKa = 11.84AMGKK47 pKa = 9.74ALKK50 pKa = 10.28KK51 pKa = 11.02AMFLGKK57 pKa = 9.37LHH59 pKa = 6.44RR60 pKa = 11.84KK61 pKa = 8.87KK62 pKa = 10.46RR63 pKa = 11.84ALSLHH68 pKa = 6.22GLPATKK74 pKa = 10.08KK75 pKa = 10.44KK76 pKa = 10.28PPPDD80 pKa = 3.37MNYY83 pKa = 9.21WRR85 pKa = 11.84PPVHH89 pKa = 6.27NVPGLEE95 pKa = 3.98RR96 pKa = 11.84LWYY99 pKa = 8.59EE100 pKa = 4.09SVHH103 pKa = 6.23RR104 pKa = 11.84SHH106 pKa = 7.16AAVCGCGDD114 pKa = 4.23FVRR117 pKa = 11.84HH118 pKa = 4.6ITALAEE124 pKa = 4.44RR125 pKa = 11.84YY126 pKa = 7.86GHH128 pKa = 6.91PGGPRR133 pKa = 11.84APGAPGIGGNPNSPPIRR150 pKa = 11.84RR151 pKa = 11.84ARR153 pKa = 11.84HH154 pKa = 4.98PAAAPEE160 pKa = 4.31PPAGNQPPALPWHH173 pKa = 6.7GDD175 pKa = 3.08GGNEE179 pKa = 4.13GASGGGDD186 pKa = 3.51DD187 pKa = 5.03AGLVADD193 pKa = 5.23FANDD197 pKa = 3.69GLDD200 pKa = 3.61EE201 pKa = 4.46LVAALDD207 pKa = 3.78EE208 pKa = 4.67EE209 pKa = 4.8EE210 pKa = 4.1

Molecular weight: 22.4 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E3TH02|E3TH02_9VIRU ORF2/3 OS=Torque teno virus 10 OX=687349 PE=4 SV=1
MM1 pKa = 7.81AEE3 pKa = 3.58FMLPVRR9 pKa = 11.84RR10 pKa = 11.84EE11 pKa = 3.67EE12 pKa = 3.79PRR14 pKa = 11.84RR15 pKa = 11.84GIRR18 pKa = 11.84TSRR21 pKa = 11.84GRR23 pKa = 11.84VPEE26 pKa = 4.17VSLHH30 pKa = 5.18TAVKK34 pKa = 9.84GQFGLGTGRR43 pKa = 11.84AMGKK47 pKa = 9.74ALKK50 pKa = 10.28KK51 pKa = 11.02AMFLGKK57 pKa = 9.37LHH59 pKa = 6.44RR60 pKa = 11.84KK61 pKa = 8.87KK62 pKa = 10.46RR63 pKa = 11.84ALSLHH68 pKa = 6.22GLPATKK74 pKa = 10.08KK75 pKa = 10.44KK76 pKa = 10.28PPPDD80 pKa = 3.37MNYY83 pKa = 9.21WRR85 pKa = 11.84PPVHH89 pKa = 6.27NVPGLEE95 pKa = 3.98RR96 pKa = 11.84LWYY99 pKa = 8.59EE100 pKa = 4.09SVHH103 pKa = 6.23RR104 pKa = 11.84SHH106 pKa = 7.16AAVCGCGDD114 pKa = 4.23FVRR117 pKa = 11.84HH118 pKa = 4.6ITALAEE124 pKa = 4.44RR125 pKa = 11.84YY126 pKa = 7.86GHH128 pKa = 6.91PGGPRR133 pKa = 11.84APGAPGIGGNPNSPPIRR150 pKa = 11.84RR151 pKa = 11.84ARR153 pKa = 11.84HH154 pKa = 4.98PAAAPEE160 pKa = 4.31PPAGNQPPALPWHH173 pKa = 6.7GDD175 pKa = 3.08GGNEE179 pKa = 4.13GASGGGDD186 pKa = 3.51DD187 pKa = 5.03AGLVADD193 pKa = 5.23FANDD197 pKa = 3.69GLDD200 pKa = 3.61EE201 pKa = 4.46LVAALDD207 pKa = 3.81EE208 pKa = 4.68EE209 pKa = 5.03EE210 pKa = 4.29SQKK213 pKa = 8.89TQGRR217 pKa = 11.84PRR219 pKa = 11.84ANPTARR225 pKa = 11.84KK226 pKa = 9.38ALRR229 pKa = 11.84FTPKK233 pKa = 10.06RR234 pKa = 11.84IEE236 pKa = 3.88AVGDD240 pKa = 3.12QRR242 pKa = 11.84RR243 pKa = 11.84RR244 pKa = 11.84EE245 pKa = 4.06RR246 pKa = 11.84SRR248 pKa = 11.84SPARR252 pKa = 11.84RR253 pKa = 11.84DD254 pKa = 3.22GGGAPQTATPPQPQRR269 pKa = 11.84AAATPKK275 pKa = 10.2GPPVRR280 pKa = 11.84LPAANKK286 pKa = 9.11DD287 pKa = 3.58AAGGSHH293 pKa = 6.63RR294 pKa = 11.84PIPTVGPSQWLFPEE308 pKa = 5.24RR309 pKa = 11.84KK310 pKa = 8.94PKK312 pKa = 10.17PPPSAGDD319 pKa = 3.03WAMEE323 pKa = 3.8YY324 pKa = 10.2LACKK328 pKa = 9.9IFNRR332 pKa = 11.84PPRR335 pKa = 11.84THH337 pKa = 6.48LTDD340 pKa = 3.8PPFYY344 pKa = 9.94PYY346 pKa = 10.68CKK348 pKa = 9.98NNYY351 pKa = 9.41NVTFQLNYY359 pKa = 10.06KK360 pKa = 9.85

Molecular weight: 39.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1665

210

744

416.3

46.75

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.808 ± 2.01

1.381 ± 0.14

4.024 ± 0.301

5.045 ± 0.37

3.363 ± 0.787

8.589 ± 1.843

3.183 ± 0.481

3.063 ± 0.839

6.306 ± 0.486

7.568 ± 0.419

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.802 ± 0.149

4.565 ± 0.358

9.369 ± 1.707

3.604 ± 1.106

9.489 ± 0.224

6.066 ± 1.454

5.045 ± 0.834

4.745 ± 0.199

2.102 ± 0.641

2.883 ± 0.903
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski