Torque teno sus virus 1 (isolate Sd-TTV31)

Taxonomy: Viruses; Anelloviridae; Iotatorquevirus; Torque teno sus virus 1a

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q8QVM1|ORF3_TTVI1 Uncharacterized ORF3 protein OS=Torque teno sus virus 1 (isolate Sd-TTV31) OX=766190 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.54KK2 pKa = 10.41EE3 pKa = 3.35KK4 pKa = 10.56DD5 pKa = 3.44YY6 pKa = 11.27WEE8 pKa = 4.4EE9 pKa = 3.78AWLTSCTSIHH19 pKa = 7.02DD20 pKa = 3.74HH21 pKa = 6.84HH22 pKa = 7.45CDD24 pKa = 3.28CGSWRR29 pKa = 11.84DD30 pKa = 4.0HH31 pKa = 6.31LWTLCALDD39 pKa = 4.96DD40 pKa = 4.87ADD42 pKa = 4.9LAAAADD48 pKa = 3.67IIEE51 pKa = 4.5RR52 pKa = 11.84EE53 pKa = 4.08EE54 pKa = 4.81ADD56 pKa = 3.34GGEE59 pKa = 4.28DD60 pKa = 3.6FGFVDD65 pKa = 5.31GDD67 pKa = 3.79PGDD70 pKa = 3.85AGGG73 pKa = 4.2

Molecular weight: 8.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q8QVM0|ORF2_TTVI1 Uncharacterized ORF2 protein OS=Torque teno sus virus 1 (isolate Sd-TTV31) OX=766190 GN=ORF1 PE=4 SV=1
MM1 pKa = 7.79RR2 pKa = 11.84FRR4 pKa = 11.84RR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84FGRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84YY14 pKa = 7.87YY15 pKa = 9.54RR16 pKa = 11.84KK17 pKa = 9.61RR18 pKa = 11.84RR19 pKa = 11.84GGWRR23 pKa = 11.84RR24 pKa = 11.84RR25 pKa = 11.84FRR27 pKa = 11.84IRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84PWRR35 pKa = 11.84RR36 pKa = 11.84WRR38 pKa = 11.84VRR40 pKa = 11.84RR41 pKa = 11.84WRR43 pKa = 11.84RR44 pKa = 11.84SVFRR48 pKa = 11.84RR49 pKa = 11.84RR50 pKa = 11.84GRR52 pKa = 11.84RR53 pKa = 11.84ARR55 pKa = 11.84PYY57 pKa = 10.21RR58 pKa = 11.84ISAWNPKK65 pKa = 7.44VLRR68 pKa = 11.84NCRR71 pKa = 11.84ITGWWPVIQCMDD83 pKa = 2.9GMEE86 pKa = 4.32WIKK89 pKa = 10.41YY90 pKa = 9.99KK91 pKa = 10.93PMDD94 pKa = 3.88LRR96 pKa = 11.84VEE98 pKa = 4.09ANRR101 pKa = 11.84IFDD104 pKa = 3.72KK105 pKa = 10.88QGSKK109 pKa = 10.07IEE111 pKa = 4.16TEE113 pKa = 3.91QMGYY117 pKa = 10.97LMQYY121 pKa = 9.69GGGWSSGVISLEE133 pKa = 3.71GLFNEE138 pKa = 3.81NRR140 pKa = 11.84LWRR143 pKa = 11.84NIWSKK148 pKa = 11.77SNDD151 pKa = 2.93GMDD154 pKa = 3.68LVRR157 pKa = 11.84YY158 pKa = 7.0FGCRR162 pKa = 11.84IRR164 pKa = 11.84LYY166 pKa = 8.47PTEE169 pKa = 4.0NQGYY173 pKa = 8.2LFWYY177 pKa = 8.41DD178 pKa = 3.52TEE180 pKa = 4.78FDD182 pKa = 3.61EE183 pKa = 5.1QQRR186 pKa = 11.84RR187 pKa = 11.84MLDD190 pKa = 3.49EE191 pKa = 3.97YY192 pKa = 9.6TQPSVMLQAKK202 pKa = 9.11NSRR205 pKa = 11.84LIVCKK210 pKa = 9.65QKK212 pKa = 9.55MPIRR216 pKa = 11.84RR217 pKa = 11.84RR218 pKa = 11.84VKK220 pKa = 10.4SIFIPPPAQLTTQWKK235 pKa = 8.5FQQEE239 pKa = 4.39LCQFPLFNWACICIDD254 pKa = 3.3MDD256 pKa = 4.61TPFDD260 pKa = 4.28YY261 pKa = 11.38NGAWRR266 pKa = 11.84NAWWLMRR273 pKa = 11.84RR274 pKa = 11.84LQNGNMEE281 pKa = 4.46YY282 pKa = 9.92IEE284 pKa = 4.12RR285 pKa = 11.84WGRR288 pKa = 11.84IPMTGDD294 pKa = 3.21TEE296 pKa = 4.91LPPADD301 pKa = 4.08DD302 pKa = 4.66FKK304 pKa = 11.68AGGVNKK310 pKa = 9.91NFKK313 pKa = 8.64PTGIQRR319 pKa = 11.84IYY321 pKa = 10.24PIVAVCLVEE330 pKa = 4.04GNKK333 pKa = 9.87RR334 pKa = 11.84VVKK337 pKa = 9.52WATVHH342 pKa = 6.44NGPIDD347 pKa = 3.43RR348 pKa = 11.84WRR350 pKa = 11.84KK351 pKa = 8.68KK352 pKa = 7.14QTGTLKK358 pKa = 10.77LSALRR363 pKa = 11.84RR364 pKa = 11.84LVLRR368 pKa = 11.84VCSEE372 pKa = 3.81SEE374 pKa = 4.12TYY376 pKa = 10.68YY377 pKa = 11.04KK378 pKa = 8.65WTASEE383 pKa = 4.09FTGAFQQDD391 pKa = 3.37WWPVSGTEE399 pKa = 4.79YY400 pKa = 10.41PLCTIKK406 pKa = 10.17MEE408 pKa = 4.57PEE410 pKa = 3.93FEE412 pKa = 4.24NPTVEE417 pKa = 4.01VWSWKK422 pKa = 8.95ATIPTAGTLKK432 pKa = 10.63DD433 pKa = 3.78YY434 pKa = 11.06FGLSSGQQWKK444 pKa = 8.76DD445 pKa = 2.72TDD447 pKa = 3.83FGRR450 pKa = 11.84LQLPRR455 pKa = 11.84SSHH458 pKa = 5.76NVDD461 pKa = 4.43FGHH464 pKa = 7.6KK465 pKa = 10.11ARR467 pKa = 11.84FGPFCVKK474 pKa = 10.27KK475 pKa = 10.35PPVEE479 pKa = 4.39FRR481 pKa = 11.84DD482 pKa = 3.9SAPNPLNIWVKK493 pKa = 8.38YY494 pKa = 7.74TFYY497 pKa = 10.76FQFGGMYY504 pKa = 9.72QPPTGIQDD512 pKa = 3.69PCTSNPTYY520 pKa = 9.73PVRR523 pKa = 11.84MVGAVTHH530 pKa = 6.51PKK532 pKa = 10.14YY533 pKa = 10.53AGQGGIATQIGDD545 pKa = 3.65QGITAASLRR554 pKa = 11.84AISAAPPNTYY564 pKa = 8.49TQSAFLKK571 pKa = 10.61APEE574 pKa = 4.24TEE576 pKa = 4.12KK577 pKa = 11.11EE578 pKa = 4.08EE579 pKa = 4.14EE580 pKa = 4.34RR581 pKa = 11.84EE582 pKa = 4.23SEE584 pKa = 4.25TSFTSAEE591 pKa = 4.16SSSEE595 pKa = 3.88GDD597 pKa = 3.7GSSDD601 pKa = 3.32DD602 pKa = 3.63QAEE605 pKa = 3.65RR606 pKa = 11.84RR607 pKa = 11.84AARR610 pKa = 11.84KK611 pKa = 9.09RR612 pKa = 11.84VIKK615 pKa = 10.69LLLKK619 pKa = 10.46RR620 pKa = 11.84LADD623 pKa = 3.62RR624 pKa = 11.84PVDD627 pKa = 3.43NKK629 pKa = 10.19RR630 pKa = 11.84RR631 pKa = 11.84RR632 pKa = 11.84FSEE635 pKa = 3.98

Molecular weight: 74.96 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

932

73

635

310.7

36.09

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.223 ± 1.363

2.253 ± 0.676

6.76 ± 3.022

6.223 ± 0.917

4.077 ± 0.936

6.652 ± 1.233

1.502 ± 1.11

4.399 ± 0.582

5.794 ± 0.729

6.652 ± 1.21

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.253 ± 0.492

2.897 ± 1.215

6.545 ± 1.26

3.97 ± 1.145

10.408 ± 2.173

6.76 ± 1.842

5.579 ± 0.295

4.185 ± 0.858

3.97 ± 0.559

2.897 ± 1.026
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski