Mount Mabu Lophuromys virus 1

Taxonomy: Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Paramyxoviridae; Orthoparamyxovirinae; Jeilongvirus; Lophuromys jeilongvirus 1

Average proteome isoelectric point is 6.8

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2P1GJ83|A0A2P1GJ83_9MONO Nucleocapsid OS=Mount Mabu Lophuromys virus 1 OX=2116559 GN=N PE=3 SV=1
MM1 pKa = 7.7AGVDD5 pKa = 3.95PNLDD9 pKa = 4.27LINNGIQTIEE19 pKa = 4.68FIQSNRR25 pKa = 11.84DD26 pKa = 3.71EE27 pKa = 4.17IQKK30 pKa = 9.55TYY32 pKa = 10.32GRR34 pKa = 11.84SSIGQPRR41 pKa = 11.84TKK43 pKa = 10.11EE44 pKa = 3.38RR45 pKa = 11.84AAAWEE50 pKa = 4.64AYY52 pKa = 10.29LEE54 pKa = 4.55SKK56 pKa = 10.51DD57 pKa = 3.76GHH59 pKa = 6.49PKK61 pKa = 8.24GQRR64 pKa = 11.84RR65 pKa = 11.84GGEE68 pKa = 4.19SQTSDD73 pKa = 3.44SEE75 pKa = 4.43SSSRR79 pKa = 11.84EE80 pKa = 3.91GNSDD84 pKa = 3.41LGSSLSQSSLSEE96 pKa = 3.73INPRR100 pKa = 11.84EE101 pKa = 4.09STGSGNYY108 pKa = 9.47KK109 pKa = 10.25GGYY112 pKa = 10.01DD113 pKa = 3.7EE114 pKa = 6.34DD115 pKa = 4.11PAEE118 pKa = 4.14LHH120 pKa = 6.53SGTRR124 pKa = 11.84DD125 pKa = 3.25DD126 pKa = 5.93CRR128 pKa = 11.84RR129 pKa = 11.84EE130 pKa = 4.02SNRR133 pKa = 11.84NGGGGTIIGEE143 pKa = 4.67GTDD146 pKa = 3.44STQGGNSSHH155 pKa = 6.89EE156 pKa = 4.25IDD158 pKa = 4.97DD159 pKa = 3.88GDD161 pKa = 3.8YY162 pKa = 11.55DD163 pKa = 5.21RR164 pKa = 11.84ICLLDD169 pKa = 3.64QATEE173 pKa = 3.72DD174 pKa = 3.56HH175 pKa = 6.62LAGKK179 pKa = 7.43EE180 pKa = 4.26TPGKK184 pKa = 10.55LEE186 pKa = 3.69VRR188 pKa = 11.84EE189 pKa = 4.42ARR191 pKa = 11.84PSDD194 pKa = 3.04IAEE197 pKa = 4.26ILSEE201 pKa = 4.32DD202 pKa = 3.16SSRR205 pKa = 11.84THH207 pKa = 5.86RR208 pKa = 11.84RR209 pKa = 11.84LRR211 pKa = 11.84GIRR214 pKa = 11.84SVSRR218 pKa = 11.84EE219 pKa = 4.16SEE221 pKa = 4.22SEE223 pKa = 4.0EE224 pKa = 4.45SDD226 pKa = 3.39VSPVKK231 pKa = 10.55KK232 pKa = 10.46GIAGSIVSMSSKK244 pKa = 10.47GKK246 pKa = 7.92HH247 pKa = 4.78TSGSGATQHH256 pKa = 6.78ALLSPSTPTNRR267 pKa = 11.84SVSADD272 pKa = 3.54DD273 pKa = 3.79ARR275 pKa = 11.84EE276 pKa = 3.91SARR279 pKa = 11.84TARR282 pKa = 11.84EE283 pKa = 3.26ISIDD287 pKa = 3.54DD288 pKa = 3.85DD289 pKa = 4.46LGVFSSFGGGSDD301 pKa = 3.18ISDD304 pKa = 4.03KK305 pKa = 10.37IDD307 pKa = 4.13RR308 pKa = 11.84MLEE311 pKa = 3.91NQNEE315 pKa = 4.41ILSKK319 pKa = 10.44LQVLAEE325 pKa = 3.93VSEE328 pKa = 4.43EE329 pKa = 3.56IKK331 pKa = 10.81GIKK334 pKa = 9.62KK335 pKa = 9.99ILTNHH340 pKa = 6.04SLSLSTLEE348 pKa = 5.39GYY350 pKa = 10.35INDD353 pKa = 3.97LMIVIPKK360 pKa = 10.22SGISNSDD367 pKa = 2.95GDD369 pKa = 4.44DD370 pKa = 3.43EE371 pKa = 5.19KK372 pKa = 11.67NPDD375 pKa = 3.14LRR377 pKa = 11.84MVVGRR382 pKa = 11.84DD383 pKa = 2.97KK384 pKa = 11.4SRR386 pKa = 11.84GVTEE390 pKa = 3.59VSKK393 pKa = 10.82RR394 pKa = 11.84KK395 pKa = 9.54RR396 pKa = 11.84PKK398 pKa = 8.69STFGEE403 pKa = 4.41EE404 pKa = 3.47IGTGRR409 pKa = 11.84TIDD412 pKa = 3.7EE413 pKa = 4.89EE414 pKa = 4.51YY415 pKa = 11.26LLDD418 pKa = 4.64PLDD421 pKa = 4.02FKK423 pKa = 11.6KK424 pKa = 10.81NNAANFVPDD433 pKa = 3.71NTPVSMSIIASMVKK447 pKa = 10.11KK448 pKa = 10.16RR449 pKa = 11.84VHH451 pKa = 7.11DD452 pKa = 4.27PDD454 pKa = 3.74TRR456 pKa = 11.84DD457 pKa = 3.34EE458 pKa = 4.52LLMLVEE464 pKa = 5.02SNLGSIPMKK473 pKa = 10.77DD474 pKa = 3.02MYY476 pKa = 10.85EE477 pKa = 4.13QIRR480 pKa = 11.84KK481 pKa = 9.5HH482 pKa = 5.96IDD484 pKa = 3.13QMDD487 pKa = 3.37SS488 pKa = 2.94

Molecular weight: 53.16 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2P1GJA5|A0A2P1GJA5_9MONO Matrix protein OS=Mount Mabu Lophuromys virus 1 OX=2116559 GN=M PE=4 SV=1
MM1 pKa = 7.46YY2 pKa = 10.18YY3 pKa = 10.28KK4 pKa = 10.69KK5 pKa = 10.7LRR7 pKa = 11.84IKK9 pKa = 10.18VIHH12 pKa = 6.11ITMEE16 pKa = 4.1GKK18 pKa = 10.45ADD20 pKa = 4.19FLPSSWSEE28 pKa = 3.59GGILHH33 pKa = 7.39AIEE36 pKa = 5.77AEE38 pKa = 3.95ADD40 pKa = 3.79DD41 pKa = 4.46EE42 pKa = 4.8GKK44 pKa = 10.45LVPKK48 pKa = 10.29YY49 pKa = 10.37RR50 pKa = 11.84VVNPGWNSRR59 pKa = 11.84KK60 pKa = 10.14GSGFMYY66 pKa = 10.6LLIYY70 pKa = 9.71GIIEE74 pKa = 4.06EE75 pKa = 4.95KK76 pKa = 10.34EE77 pKa = 4.24SKK79 pKa = 10.24DD80 pKa = 3.21KK81 pKa = 11.12KK82 pKa = 10.54NRR84 pKa = 11.84GFKK87 pKa = 10.73SFGAFPLGVGRR98 pKa = 11.84SRR100 pKa = 11.84ADD102 pKa = 3.38PQDD105 pKa = 3.92LLDD108 pKa = 5.57AVLQLDD114 pKa = 3.34ITVRR118 pKa = 11.84RR119 pKa = 11.84TAGAGEE125 pKa = 4.27KK126 pKa = 10.54LVMGTNNINPILTPWKK142 pKa = 10.52GILTNGAVFQAIKK155 pKa = 10.33VCNNVDD161 pKa = 3.72TIMVDD166 pKa = 3.4RR167 pKa = 11.84PQKK170 pKa = 10.24LRR172 pKa = 11.84PIFLTITLLTDD183 pKa = 3.93AGCYY187 pKa = 9.55KK188 pKa = 10.35IPRR191 pKa = 11.84TILDD195 pKa = 3.74FRR197 pKa = 11.84ASGAMSFNLLVVLSIGADD215 pKa = 3.44FTPYY219 pKa = 8.34GTKK222 pKa = 10.78GMINEE227 pKa = 4.52DD228 pKa = 3.87GEE230 pKa = 4.55RR231 pKa = 11.84VTTFMVHH238 pKa = 5.85IGNFVRR244 pKa = 11.84RR245 pKa = 11.84CGKK248 pKa = 9.89EE249 pKa = 3.61YY250 pKa = 10.9SVDD253 pKa = 3.38YY254 pKa = 10.77CRR256 pKa = 11.84QKK258 pKa = 10.21VDD260 pKa = 3.46KK261 pKa = 9.78MDD263 pKa = 3.58LRR265 pKa = 11.84FSLGAVGGLSFHH277 pKa = 6.77VKK279 pKa = 10.21LAGKK283 pKa = 9.68VSKK286 pKa = 8.5TLRR289 pKa = 11.84AQLGHH294 pKa = 6.65RR295 pKa = 11.84TTICYY300 pKa = 10.8SLMDD304 pKa = 4.0TNPYY308 pKa = 9.65LNRR311 pKa = 11.84VMWKK315 pKa = 10.16AEE317 pKa = 3.75CSIQKK322 pKa = 8.05VTAVFQPSVPRR333 pKa = 11.84DD334 pKa = 3.23FKK336 pKa = 11.1IYY338 pKa = 10.6DD339 pKa = 3.84DD340 pKa = 4.07VLIDD344 pKa = 3.55HH345 pKa = 7.21TGKK348 pKa = 10.1ILKK351 pKa = 9.27QQ352 pKa = 3.26

Molecular weight: 39.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8

0

8

5363

155

2174

670.4

75.66

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.96 ± 0.639

1.417 ± 0.273

6.023 ± 0.36

5.519 ± 0.714

3.636 ± 0.512

5.948 ± 0.806

1.846 ± 0.396

7.869 ± 0.451

6.172 ± 0.373

9.528 ± 0.745

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.666 ± 0.238

5.762 ± 0.545

4.55 ± 0.439

3.841 ± 0.233

5.221 ± 0.51

8.186 ± 0.73

6.228 ± 0.771

5.668 ± 0.36

0.951 ± 0.178

4.009 ± 0.671
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski