Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_142

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
6.575AlaAla: 6.575 ± 3.305
3.287AlaCys: 3.287 ± 2.203
1.972AlaAsp: 1.972 ± 1.059
5.26AlaGlu: 5.26 ± 2.184
5.917AlaPhe: 5.917 ± 2.246
3.287AlaGly: 3.287 ± 1.506
1.315AlaHis: 1.315 ± 0.867
3.945AlaIle: 3.945 ± 1.205
5.917AlaLys: 5.917 ± 2.939
8.547AlaLeu: 8.547 ± 2.66
1.972AlaMet: 1.972 ± 1.096
5.917AlaAsn: 5.917 ± 2.249
1.972AlaPro: 1.972 ± 1.497
0.657AlaGln: 0.657 ± 0.445
2.63AlaArg: 2.63 ± 0.994
9.862AlaSer: 9.862 ± 4.098
3.945AlaThr: 3.945 ± 1.521
1.972AlaVal: 1.972 ± 0.922
0.657AlaTrp: 0.657 ± 0.678
2.63AlaTyr: 2.63 ± 1.705
0.0AlaXaa: 0.0 ± 0.0
Cys
0.657CysAla: 0.657 ± 0.855
0.0CysCys: 0.0 ± 0.0
1.315CysAsp: 1.315 ± 0.859
0.657CysGlu: 0.657 ± 1.016
1.315CysPhe: 1.315 ± 1.169
1.315CysGly: 1.315 ± 0.859
0.0CysHis: 0.0 ± 0.0
0.657CysIle: 0.657 ± 0.678
0.657CysLys: 0.657 ± 0.788
2.63CysLeu: 2.63 ± 0.784
0.0CysMet: 0.0 ± 0.0
1.315CysAsn: 1.315 ± 0.91
1.972CysPro: 1.972 ± 1.754
0.0CysGln: 0.0 ± 0.0
1.315CysArg: 1.315 ± 1.018
0.0CysSer: 0.0 ± 0.0
0.657CysThr: 0.657 ± 0.445
0.657CysVal: 0.657 ± 0.445
0.657CysTrp: 0.657 ± 0.678
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
3.287AspAla: 3.287 ± 1.638
0.0AspCys: 0.0 ± 0.0
1.315AspAsp: 1.315 ± 0.91
5.26AspGlu: 5.26 ± 2.854
5.917AspPhe: 5.917 ± 1.763
0.657AspGly: 0.657 ± 1.016
2.63AspHis: 2.63 ± 1.17
3.287AspIle: 3.287 ± 1.309
5.26AspLys: 5.26 ± 1.249
7.89AspLeu: 7.89 ± 2.433
1.972AspMet: 1.972 ± 1.038
1.972AspAsn: 1.972 ± 1.214
2.63AspPro: 2.63 ± 0.994
0.0AspGln: 0.0 ± 0.0
0.657AspArg: 0.657 ± 0.788
1.315AspSer: 1.315 ± 0.89
2.63AspThr: 2.63 ± 0.994
1.972AspVal: 1.972 ± 0.987
0.0AspTrp: 0.0 ± 0.0
3.945AspTyr: 3.945 ± 1.36
0.0AspXaa: 0.0 ± 0.0
Glu
5.917GluAla: 5.917 ± 2.57
0.657GluCys: 0.657 ± 0.678
4.602GluAsp: 4.602 ± 2.618
3.945GluGlu: 3.945 ± 2.522
1.315GluPhe: 1.315 ± 1.356
1.315GluGly: 1.315 ± 1.299
1.315GluHis: 1.315 ± 0.773
5.917GluIle: 5.917 ± 3.077
5.917GluLys: 5.917 ± 2.911
7.232GluLeu: 7.232 ± 2.813
1.972GluMet: 1.972 ± 2.285
5.26GluAsn: 5.26 ± 1.827
1.315GluPro: 1.315 ± 0.89
1.972GluGln: 1.972 ± 0.987
2.63GluArg: 2.63 ± 1.333
4.602GluSer: 4.602 ± 1.747
4.602GluThr: 4.602 ± 1.295
0.657GluVal: 0.657 ± 0.445
1.972GluTrp: 1.972 ± 1.497
3.945GluTyr: 3.945 ± 1.193
0.0GluXaa: 0.0 ± 0.0
Phe
2.63PheAla: 2.63 ± 1.399
1.315PheCys: 1.315 ± 0.649
3.287PheAsp: 3.287 ± 1.799
2.63PheGlu: 2.63 ± 1.323
1.315PhePhe: 1.315 ± 0.649
2.63PheGly: 2.63 ± 1.238
1.972PheHis: 1.972 ± 1.332
5.26PheIle: 5.26 ± 2.26
3.287PheLys: 3.287 ± 2.238
2.63PheLeu: 2.63 ± 1.125
0.0PheMet: 0.0 ± 0.0
1.315PheAsn: 1.315 ± 0.649
2.63PhePro: 2.63 ± 0.784
1.315PheGln: 1.315 ± 0.798
0.657PheArg: 0.657 ± 0.678
3.945PheSer: 3.945 ± 1.576
2.63PheThr: 2.63 ± 1.78
2.63PheVal: 2.63 ± 1.271
0.657PheTrp: 0.657 ± 0.445
3.287PheTyr: 3.287 ± 2.249
0.0PheXaa: 0.0 ± 0.0
Gly
4.602GlyAla: 4.602 ± 1.418
0.657GlyCys: 0.657 ± 0.678
2.63GlyAsp: 2.63 ± 0.969
1.972GlyGlu: 1.972 ± 1.196
2.63GlyPhe: 2.63 ± 1.034
6.575GlyGly: 6.575 ± 1.237
0.0GlyHis: 0.0 ± 0.0
1.315GlyIle: 1.315 ± 1.329
3.945GlyLys: 3.945 ± 1.395
3.945GlyLeu: 3.945 ± 1.659
1.315GlyMet: 1.315 ± 0.649
3.287GlyAsn: 3.287 ± 1.351
0.0GlyPro: 0.0 ± 0.0
0.657GlyGln: 0.657 ± 1.016
2.63GlyArg: 2.63 ± 0.913
5.917GlySer: 5.917 ± 2.738
1.972GlyThr: 1.972 ± 1.364
5.26GlyVal: 5.26 ± 2.636
0.0GlyTrp: 0.0 ± 0.0
3.287GlyTyr: 3.287 ± 1.484
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
0.0HisCys: 0.0 ± 0.0
1.972HisAsp: 1.972 ± 1.052
2.63HisGlu: 2.63 ± 1.718
1.315HisPhe: 1.315 ± 1.356
0.0HisGly: 0.0 ± 0.0
0.0HisHis: 0.0 ± 0.0
1.315HisIle: 1.315 ± 0.649
1.972HisLys: 1.972 ± 0.986
1.972HisLeu: 1.972 ± 1.251
0.657HisMet: 0.657 ± 0.862
0.657HisAsn: 0.657 ± 0.445
2.63HisPro: 2.63 ± 1.13
0.657HisGln: 0.657 ± 0.788
1.315HisArg: 1.315 ± 1.076
0.0HisSer: 0.0 ± 0.0
1.315HisThr: 1.315 ± 0.817
0.657HisVal: 0.657 ± 0.862
0.0HisTrp: 0.0 ± 0.0
1.315HisTyr: 1.315 ± 0.649
0.0HisXaa: 0.0 ± 0.0
Ile
5.26IleAla: 5.26 ± 2.079
0.0IleCys: 0.0 ± 0.0
3.287IleAsp: 3.287 ± 1.752
4.602IleGlu: 4.602 ± 1.551
1.972IlePhe: 1.972 ± 1.969
3.287IleGly: 3.287 ± 1.121
0.0IleHis: 0.0 ± 0.0
1.972IleIle: 1.972 ± 1.503
7.232IleLys: 7.232 ± 1.651
5.917IleLeu: 5.917 ± 1.422
1.972IleMet: 1.972 ± 1.33
3.287IleAsn: 3.287 ± 2.396
4.602IlePro: 4.602 ± 1.472
1.315IleGln: 1.315 ± 0.933
2.63IleArg: 2.63 ± 1.905
3.945IleSer: 3.945 ± 1.948
7.232IleThr: 7.232 ± 1.995
3.287IleVal: 3.287 ± 1.364
0.657IleTrp: 0.657 ± 0.445
1.972IleTyr: 1.972 ± 0.986
0.0IleXaa: 0.0 ± 0.0
Lys
5.26LysAla: 5.26 ± 2.369
1.315LysCys: 1.315 ± 0.859
3.945LysAsp: 3.945 ± 1.214
11.177LysGlu: 11.177 ± 3.986
1.972LysPhe: 1.972 ± 0.691
4.602LysGly: 4.602 ± 1.96
2.63LysHis: 2.63 ± 1.13
5.26LysIle: 5.26 ± 1.848
6.575LysLys: 6.575 ± 2.838
5.26LysLeu: 5.26 ± 2.191
1.972LysMet: 1.972 ± 0.85
4.602LysAsn: 4.602 ± 1.196
3.945LysPro: 3.945 ± 1.952
3.287LysGln: 3.287 ± 1.186
2.63LysArg: 2.63 ± 1.677
4.602LysSer: 4.602 ± 1.783
4.602LysThr: 4.602 ± 2.305
1.315LysVal: 1.315 ± 1.169
0.657LysTrp: 0.657 ± 1.016
2.63LysTyr: 2.63 ± 1.484
0.0LysXaa: 0.0 ± 0.0
Leu
7.89LeuAla: 7.89 ± 1.686
1.315LeuCys: 1.315 ± 1.249
3.945LeuAsp: 3.945 ± 2.019
3.287LeuGlu: 3.287 ± 1.859
1.972LeuPhe: 1.972 ± 1.741
7.232LeuGly: 7.232 ± 2.631
2.63LeuHis: 2.63 ± 1.238
5.917LeuIle: 5.917 ± 1.956
9.862LeuLys: 9.862 ± 3.845
5.917LeuLeu: 5.917 ± 2.682
1.972LeuMet: 1.972 ± 1.341
3.945LeuAsn: 3.945 ± 1.279
3.945LeuPro: 3.945 ± 2.077
3.945LeuGln: 3.945 ± 1.209
3.945LeuArg: 3.945 ± 1.515
6.575LeuSer: 6.575 ± 1.143
7.232LeuThr: 7.232 ± 1.706
1.972LeuVal: 1.972 ± 0.775
0.0LeuTrp: 0.0 ± 0.0
5.26LeuTyr: 5.26 ± 3.493
0.0LeuXaa: 0.0 ± 0.0
Met
4.602MetAla: 4.602 ± 3.019
1.315MetCys: 1.315 ± 1.04
1.315MetAsp: 1.315 ± 1.364
1.315MetGlu: 1.315 ± 1.159
3.287MetPhe: 3.287 ± 1.183
0.657MetGly: 0.657 ± 0.781
0.657MetHis: 0.657 ± 0.445
1.972MetIle: 1.972 ± 0.987
3.945MetLys: 3.945 ± 1.763
1.972MetLeu: 1.972 ± 1.087
0.0MetMet: 0.0 ± 0.0
0.0MetAsn: 0.0 ± 0.0
1.972MetPro: 1.972 ± 1.052
0.657MetGln: 0.657 ± 0.862
0.657MetArg: 0.657 ± 0.445
1.972MetSer: 1.972 ± 1.114
0.657MetThr: 0.657 ± 1.016
0.657MetVal: 0.657 ± 0.445
0.0MetTrp: 0.0 ± 0.0
0.657MetTyr: 0.657 ± 0.445
0.0MetXaa: 0.0 ± 0.0
Asn
4.602AsnAla: 4.602 ± 2.504
0.0AsnCys: 0.0 ± 0.0
3.287AsnAsp: 3.287 ± 1.121
5.917AsnGlu: 5.917 ± 1.856
4.602AsnPhe: 4.602 ± 1.418
1.315AsnGly: 1.315 ± 1.562
0.0AsnHis: 0.0 ± 0.0
1.315AsnIle: 1.315 ± 0.89
3.945AsnLys: 3.945 ± 1.452
5.26AsnLeu: 5.26 ± 2.88
0.657AsnMet: 0.657 ± 0.855
1.315AsnAsn: 1.315 ± 0.89
3.945AsnPro: 3.945 ± 1.404
1.315AsnGln: 1.315 ± 1.165
3.287AsnArg: 3.287 ± 1.703
2.63AsnSer: 2.63 ± 1.116
5.917AsnThr: 5.917 ± 2.577
1.315AsnVal: 1.315 ± 1.45
0.657AsnTrp: 0.657 ± 0.815
3.945AsnTyr: 3.945 ± 1.631
0.0AsnXaa: 0.0 ± 0.0
Pro
2.63ProAla: 2.63 ± 0.913
0.657ProCys: 0.657 ± 0.678
2.63ProAsp: 2.63 ± 1.319
2.63ProGlu: 2.63 ± 0.969
3.287ProPhe: 3.287 ± 2.078
1.972ProGly: 1.972 ± 0.883
0.657ProHis: 0.657 ± 0.678
3.945ProIle: 3.945 ± 1.441
1.972ProLys: 1.972 ± 1.601
4.602ProLeu: 4.602 ± 1.442
3.945ProMet: 3.945 ± 1.689
1.315ProAsn: 1.315 ± 0.89
1.315ProPro: 1.315 ± 0.859
1.315ProGln: 1.315 ± 0.89
1.315ProArg: 1.315 ± 1.018
2.63ProSer: 2.63 ± 1.677
1.315ProThr: 1.315 ± 0.649
2.63ProVal: 2.63 ± 1.318
0.657ProTrp: 0.657 ± 0.445
6.575ProTyr: 6.575 ± 1.954
0.0ProXaa: 0.0 ± 0.0
Gln
2.63GlnAla: 2.63 ± 1.848
0.0GlnCys: 0.0 ± 0.0
1.972GlnAsp: 1.972 ± 1.106
2.63GlnGlu: 2.63 ± 2.092
1.315GlnPhe: 1.315 ± 0.649
1.972GlnGly: 1.972 ± 0.986
0.0GlnHis: 0.0 ± 0.0
1.972GlnIle: 1.972 ± 0.691
1.972GlnLys: 1.972 ± 0.883
1.315GlnLeu: 1.315 ± 1.055
0.0GlnMet: 0.0 ± 0.0
1.972GlnAsn: 1.972 ± 1.497
1.972GlnPro: 1.972 ± 1.106
0.657GlnGln: 0.657 ± 0.678
1.972GlnArg: 1.972 ± 1.059
1.972GlnSer: 1.972 ± 2.034
1.315GlnThr: 1.315 ± 0.89
1.315GlnVal: 1.315 ± 0.89
0.0GlnTrp: 0.0 ± 0.0
1.315GlnTyr: 1.315 ± 1.329
0.0GlnXaa: 0.0 ± 0.0
Arg
3.287ArgAla: 3.287 ± 1.974
1.972ArgCys: 1.972 ± 1.142
1.972ArgAsp: 1.972 ± 1.251
1.315ArgGlu: 1.315 ± 0.89
0.657ArgPhe: 0.657 ± 0.445
0.657ArgGly: 0.657 ± 0.855
1.315ArgHis: 1.315 ± 0.859
2.63ArgIle: 2.63 ± 1.034
2.63ArgLys: 2.63 ± 1.333
5.26ArgLeu: 5.26 ± 1.458
1.972ArgMet: 1.972 ± 0.964
1.972ArgAsn: 1.972 ± 1.059
1.972ArgPro: 1.972 ± 1.251
0.657ArgGln: 0.657 ± 0.678
1.315ArgArg: 1.315 ± 0.649
3.287ArgSer: 3.287 ± 1.638
1.972ArgThr: 1.972 ± 1.196
1.972ArgVal: 1.972 ± 1.142
0.0ArgTrp: 0.0 ± 0.0
3.287ArgTyr: 3.287 ± 1.297
0.0ArgXaa: 0.0 ± 0.0
Ser
7.232SerAla: 7.232 ± 2.36
0.657SerCys: 0.657 ± 0.445
4.602SerAsp: 4.602 ± 1.228
3.287SerGlu: 3.287 ± 1.375
0.0SerPhe: 0.0 ± 0.0
5.917SerGly: 5.917 ± 2.246
2.63SerHis: 2.63 ± 2.151
4.602SerIle: 4.602 ± 1.91
4.602SerLys: 4.602 ± 1.196
3.945SerLeu: 3.945 ± 4.069
3.945SerMet: 3.945 ± 1.763
7.89SerAsn: 7.89 ± 2.703
0.657SerPro: 0.657 ± 0.781
3.945SerGln: 3.945 ± 1.564
1.972SerArg: 1.972 ± 0.997
4.602SerSer: 4.602 ± 1.931
3.287SerThr: 3.287 ± 1.703
3.287SerVal: 3.287 ± 1.302
0.657SerTrp: 0.657 ± 0.445
2.63SerTyr: 2.63 ± 1.039
0.0SerXaa: 0.0 ± 0.0
Thr
3.945ThrAla: 3.945 ± 2.281
1.972ThrCys: 1.972 ± 0.691
1.972ThrAsp: 1.972 ± 0.691
0.657ThrGlu: 0.657 ± 0.445
1.315ThrPhe: 1.315 ± 1.157
4.602ThrGly: 4.602 ± 1.908
1.315ThrHis: 1.315 ± 0.649
6.575ThrIle: 6.575 ± 2.467
3.945ThrLys: 3.945 ± 1.517
4.602ThrLeu: 4.602 ± 1.747
0.657ThrMet: 0.657 ± 0.445
3.287ThrAsn: 3.287 ± 1.155
6.575ThrPro: 6.575 ± 2.192
2.63ThrGln: 2.63 ± 1.248
3.287ThrArg: 3.287 ± 1.97
3.945ThrSer: 3.945 ± 1.351
3.287ThrThr: 3.287 ± 1.713
5.917ThrVal: 5.917 ± 1.023
0.0ThrTrp: 0.0 ± 0.0
1.315ThrTyr: 1.315 ± 1.157
0.0ThrXaa: 0.0 ± 0.0
Val
1.972ValAla: 1.972 ± 1.335
0.0ValCys: 0.0 ± 0.0
2.63ValAsp: 2.63 ± 1.547
2.63ValGlu: 2.63 ± 1.341
1.972ValPhe: 1.972 ± 1.468
2.63ValGly: 2.63 ± 1.741
0.657ValHis: 0.657 ± 0.445
3.287ValIle: 3.287 ± 1.846
2.63ValLys: 2.63 ± 2.403
3.287ValLeu: 3.287 ± 1.375
0.657ValMet: 0.657 ± 0.445
3.945ValAsn: 3.945 ± 1.766
3.287ValPro: 3.287 ± 1.83
0.657ValGln: 0.657 ± 0.445
1.315ValArg: 1.315 ± 1.356
5.26ValSer: 5.26 ± 1.385
1.972ValThr: 1.972 ± 1.052
1.315ValVal: 1.315 ± 0.89
0.657ValTrp: 0.657 ± 0.678
1.315ValTyr: 1.315 ± 0.867
0.0ValXaa: 0.0 ± 0.0
Trp
1.315TrpAla: 1.315 ± 0.89
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
0.0TrpGlu: 0.0 ± 0.0
0.0TrpPhe: 0.0 ± 0.0
0.0TrpGly: 0.0 ± 0.0
0.657TrpHis: 0.657 ± 1.016
0.657TrpIle: 0.657 ± 0.815
0.657TrpLys: 0.657 ± 0.678
1.972TrpLeu: 1.972 ± 1.503
0.657TrpMet: 0.657 ± 0.788
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.657TrpGln: 0.657 ± 0.678
0.657TrpArg: 0.657 ± 0.445
0.657TrpSer: 0.657 ± 0.445
0.657TrpThr: 0.657 ± 0.445
0.657TrpVal: 0.657 ± 0.678
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
3.945TyrAla: 3.945 ± 1.982
0.657TyrCys: 0.657 ± 1.016
3.945TyrAsp: 3.945 ± 1.279
5.26TyrGlu: 5.26 ± 1.576
3.945TyrPhe: 3.945 ± 1.145
1.972TyrGly: 1.972 ± 1.9
0.0TyrHis: 0.0 ± 0.0
2.63TyrIle: 2.63 ± 1.905
1.315TyrLys: 1.315 ± 1.299
5.26TyrLeu: 5.26 ± 1.976
1.315TyrMet: 1.315 ± 1.257
1.972TyrAsn: 1.972 ± 0.997
0.657TyrPro: 0.657 ± 0.678
1.972TyrGln: 1.972 ± 1.059
3.287TyrArg: 3.287 ± 1.302
2.63TyrSer: 2.63 ± 1.107
4.602TyrThr: 4.602 ± 1.472
2.63TyrVal: 2.63 ± 0.877
1.315TyrTrp: 1.315 ± 0.859
3.287TyrTyr: 3.287 ± 1.301
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 8 proteins (1522 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski