Arthrobacter phage Beans

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Marthavirus; Arthrobacter virus Beans

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 73 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A222ZJ07|A0A222ZJ07_9CAUD Uncharacterized protein OS=Arthrobacter phage Beans OX=2015815 GN=16 PE=4 SV=1
MM1 pKa = 7.89ADD3 pKa = 3.48GVLSFPFRR11 pKa = 11.84LDD13 pKa = 3.07TTGAIATVADD23 pKa = 4.2GSDD26 pKa = 3.26AYY28 pKa = 11.2VDD30 pKa = 3.2EE31 pKa = 5.93HH32 pKa = 6.36IAKK35 pKa = 10.28LVLTNIGEE43 pKa = 4.61CPMSPEE49 pKa = 4.09YY50 pKa = 10.59GVPDD54 pKa = 3.61PTFAALHH61 pKa = 6.3IGDD64 pKa = 4.04VQAGLSTFGPSGVRR78 pKa = 11.84VTAVEE83 pKa = 4.09MTPFSDD89 pKa = 3.77TQSVASIAWAYY100 pKa = 9.99EE101 pKa = 3.61NALGVTNNGG110 pKa = 3.22

Molecular weight: 11.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A222ZJY6|A0A222ZJY6_9CAUD Uncharacterized protein OS=Arthrobacter phage Beans OX=2015815 GN=51 PE=4 SV=1
MM1 pKa = 7.21TTPQNNPQAKK11 pKa = 8.68QRR13 pKa = 11.84KK14 pKa = 4.49TTQRR18 pKa = 11.84RR19 pKa = 11.84AAAGRR24 pKa = 11.84SAQKK28 pKa = 9.63PRR30 pKa = 11.84KK31 pKa = 8.57RR32 pKa = 11.84TALPKK37 pKa = 10.16AAPKK41 pKa = 10.07PLEE44 pKa = 4.37PLTALGPLWPDD55 pKa = 3.73PLPLEE60 pKa = 4.01YY61 pKa = 10.05HH62 pKa = 6.54AEE64 pKa = 3.83IEE66 pKa = 3.96IDD68 pKa = 3.4VRR70 pKa = 11.84LWDD73 pKa = 3.57WQKK76 pKa = 9.44TRR78 pKa = 11.84ISANDD83 pKa = 3.47RR84 pKa = 11.84LDD86 pKa = 3.49PRR88 pKa = 11.84EE89 pKa = 4.06KK90 pKa = 10.64NRR92 pKa = 11.84RR93 pKa = 11.84TQIWRR98 pKa = 11.84SAAEE102 pKa = 4.04AAVLAAGIDD111 pKa = 3.72PLSWARR117 pKa = 11.84VVYY120 pKa = 8.97WVRR123 pKa = 11.84WPDD126 pKa = 3.0NRR128 pKa = 11.84KK129 pKa = 9.69RR130 pKa = 11.84EE131 pKa = 4.11TSNLQPTAKK140 pKa = 10.31AIVDD144 pKa = 3.72GMVDD148 pKa = 3.93ARR150 pKa = 11.84VLPDD154 pKa = 4.64DD155 pKa = 4.36RR156 pKa = 11.84DD157 pKa = 3.71EE158 pKa = 4.54MVDD161 pKa = 3.56GPDD164 pKa = 3.63ARR166 pKa = 11.84RR167 pKa = 11.84IYY169 pKa = 10.48PNGPHH174 pKa = 6.57RR175 pKa = 11.84VIIQLWRR182 pKa = 11.84RR183 pKa = 11.84AA184 pKa = 3.44

Molecular weight: 21.15 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

73

0

73

15703

42

875

215.1

23.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.367 ± 0.509

0.675 ± 0.092

6.196 ± 0.287

6.496 ± 0.397

2.764 ± 0.164

7.827 ± 0.386

1.618 ± 0.132

4.744 ± 0.229

4.286 ± 0.196

8.075 ± 0.313

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.331 ± 0.158

3.324 ± 0.186

5.139 ± 0.32

3.611 ± 0.191

6.394 ± 0.334

5.566 ± 0.269

6.827 ± 0.349

7.788 ± 0.321

1.528 ± 0.153

2.445 ± 0.142
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski