Tupaiid herpesvirus 1 (strain 1) (TuHV-1) (Herpesvirus tupaia (strain 1))

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Quwivirus

Average proteome isoelectric point is 7.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 157 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q91TT5|Q91TT5_TUHV1 T22.4 OS=Tupaiid herpesvirus 1 (strain 1) OX=10397 PE=4 SV=1
MM1 pKa = 7.34SFVSDD6 pKa = 3.63TLSAKK11 pKa = 10.42AVVTIYY17 pKa = 9.39ITTFLTVLKK26 pKa = 9.09LVCSSSEE33 pKa = 4.24SLTLTPFTSDD43 pKa = 3.03LTVSEE48 pKa = 5.36DD49 pKa = 3.41EE50 pKa = 4.92GNTNTTGFGATTGFFSDD67 pKa = 5.54GITEE71 pKa = 4.04ATTIDD76 pKa = 4.82DD77 pKa = 3.6IASFTTVAVQNSSEE91 pKa = 4.31TATEE95 pKa = 4.2TVSVLNVTDD104 pKa = 3.79STPDD108 pKa = 3.2MSLVTVTSDD117 pKa = 3.54GNEE120 pKa = 4.03LTDD123 pKa = 3.46TLPYY127 pKa = 10.38TEE129 pKa = 4.9TSTGTILQLL138 pKa = 3.81

Molecular weight: 14.44 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q91TQ0|Q91TQ0_TUHV1 T43 OS=Tupaiid herpesvirus 1 (strain 1) OX=10397 PE=4 SV=1
MM1 pKa = 7.25IRR3 pKa = 11.84TVVSNGPPAVSVPSASPIVLLSHH26 pKa = 6.89PRR28 pKa = 11.84RR29 pKa = 11.84PDD31 pKa = 3.01RR32 pKa = 11.84ARR34 pKa = 11.84GPRR37 pKa = 11.84LFPPVGSRR45 pKa = 11.84SSASTTSPVRR55 pKa = 11.84AAQRR59 pKa = 11.84PRR61 pKa = 11.84RR62 pKa = 11.84VKK64 pKa = 10.49AVPTVNAIRR73 pKa = 11.84ASMTNSASRR82 pKa = 11.84IAAAQPQLLSISRR95 pKa = 11.84RR96 pKa = 11.84RR97 pKa = 11.84AAVVAAEE104 pKa = 4.37GGG106 pKa = 3.55

Molecular weight: 11.05 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

157

0

157

58199

53

2295

370.7

40.89

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.827 ± 0.289

1.995 ± 0.099

5.184 ± 0.141

5.39 ± 0.14

3.368 ± 0.132

7.227 ± 0.274

2.507 ± 0.118

2.789 ± 0.138

1.952 ± 0.113

10.143 ± 0.275

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.299 ± 0.086

2.199 ± 0.111

7.474 ± 0.247

2.916 ± 0.147

10.498 ± 0.274

7.01 ± 0.213

5.993 ± 0.196

7.043 ± 0.162

1.464 ± 0.082

2.72 ± 0.113
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski